Site Name: bwh002376.bwh.harvard.edu
Build Name: ChestImagingPlatform-release-Darwin-13.4.0-x86_64-incr-SL-ON (view notes)
Stamp: 20150322-0400-Nightly (related builds)
Time: 2015-03-22T23:06:37 EDT
Type: Nightly

OS Name: Mac OS X
OS Platform: x86_64
OS Release: 10.9.5
OS Version: 13F34
Compiler Version: unknown
CTest version: ctest-3.0.2

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Build503
Test724
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Stage: Update (0 errors, 0 warnings)

Start Time: 2015-03-22T23:06:11 EDT
End Time: 2015-03-22T23:06:12 EDT
Update Command: "/Applications/GitHub.app/Contents/Resources/git/bin/git" "fetch"
Update Type: GIT
Number of Updates: 2

Configure (0 errors, 0 warnings)

Start Time: 2015-03-22T23:06:12 EDT
End Time: 2015-03-22T23:06:36 EDT
Configure Command: /Users/acil-user/Library/Enthought/Canopy_64bit/User/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/Users/acil-user/Projects/ChestImagingPlatform-release"
Configure Return Value: 0
Configure Output: 
----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
----------- DONE ------------
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: ResampleLabelMap3D
-- Configuring CIP
-- Configuring SEM CLI module: ResampleLabelMap2D
-- Configuring SEM CLI module: ResampleLabelMap
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT2D
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT3D
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ScourParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateRegionHistogramsAndParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: TransferFieldDataToFromPointData
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric3D
-- Configuring SEM CLI module: GetTransformationSimilarityMetric2D
-- Configuring SEM CLI module: GetTransformationSimilarityMetric
-- Configuring SEM CLI module: GetTransformationKappa2D
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: RegisterLabelMaps3D
-- Configuring SEM CLI module: RegisterLabelMaps2D
-- Configuring SEM CLI module: RegisterLabelMaps
-- Configuring SEM CLI module: RegisterCT2D
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue
-- Configuring SEM CLI module: FilterConnectedComponents
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/acil-user/Projects/ChestImagingPlatform-release-build/CIP-build

View Configure Summary

Build (50 errors, 3 warnings)

Build command: -- -i
Start Time: 2015-03-22T23:06:37 EDT
End Time: 2015-03-22T23:25:49 EDT

Build Log line 4208


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
[ 82%] Built target ITKIOTIFF-all
Scanning dependencies of target ITKIOTransformBase
[ 82%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformFactoryBase.cxx.o
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/TransformBase/src/itkTransformFactoryBase.cxx:41:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Filtering/DisplacementField/include/itkBSplineExponentialDiffeomorphicTransform.h:21:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Filtering/DisplacementField/include/itkConstantVelocityFieldTransform.h:227:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Filtering/DisplacementField/include/itkConstantVelocityFieldTransform.hxx:23:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Filtering/DisplacementField/include/itkExponentialDisplacementFieldImageFilter.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.h:150:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.hxx:23:

/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[ 82%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformFileWriterSpecializations.cxx.o
Linking CXX shared library ../../../../lib/libITKIOTransformBase-4.6.dylib

clang: error: no such file or directory: 'CMakeFiles/ITKIOTransformBase.dir/itkTransformFactoryBase.cxx.o'

[ 82%] Built target ITKIOTransformBase
[ 82%] Built target ITKIOTransformBase-all
[ 82%] Built target H5make_libsettings
[ 82%] Built target H5detect
Linking C shared library ../../../../../../lib/libitkhdf5-4.6.dylib
[ 95%] Built target itkhdf5
[ 95%] Building CXX object Modules/ThirdParty/HDF5/src/itkhdf5/c++/src/CMakeFiles/itkhdf5_cpp.dir/H5AbstractDs.cpp.o
[ 95%] Building CXX object Modules/ThirdParty/HDF5/src/itkhdf5/c++/src/CMakeFiles/itkhdf5_cpp.dir/H5ArrayType.cpp.o
[ 95%] Building CXX object Modules/ThirdParty/HDF5/src/itkhdf5/c++/src/CMakeFiles/itkhdf5_cpp.dir/H5AtomType.cpp.o
[ 95%] Building CXX object Modules/ThirdParty/HDF5/src/itkhdf5/c++/src/CMakeFiles/itkhdf5_cpp.dir/H5Attribute.cpp.o
Build Log line 4299


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
Linking CXX shared library ../../../../lib/libITKIOLSM-4.6.dylib
[ 98%] Built target ITKIOLSM
[ 98%] Built target ITKIOLSM-all
Scanning dependencies of target itkTestDriver
[ 98%] Building CXX object Modules/Core/TestKernel/src/CMakeFiles/itkTestDriver.dir/itkTestDriver.cxx.o
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/TestKernel/src/itkTestDriver.cxx:29:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:31:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/TestKernel/include/itkTestDriverInclude.h:50:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX executable ../../../../bin/itkTestDriver

clang: error: no such file or directory: 'CMakeFiles/itkTestDriver.dir/itkTestDriver.cxx.o'

[ 98%] Built target itkTestDriver
[ 98%] Built target ITKTestKernel-all
[ 98%] Built target ITKV3Compatibility-all
Scanning dependencies of target ITKVTK
[ 98%] Building CXX object Modules/Bridge/VTK/src/CMakeFiles/ITKVTK.dir/itkVTKImageExportBase.cxx.o
Linking CXX shared library ../../../../lib/libITKVTK-4.6.dylib
[ 98%] Built target ITKVTK
[ 98%] Built target ITKVTK-all
[ 98%] Built target ITKVoronoi-all
Scanning dependencies of target ITKWatersheds
Build Log line 4557


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
Scanning dependencies of target CIPCommon
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipThinPlateSplineSurface.cxx.o
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipLobeSurfaceModel.cxx.o
[  4%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestRegionChestTypeLocations.cxx.o
[  4%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipSphereStencil.cxx.o
[  4%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipCylinderStencil.cxx.o
[  5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestDataViewer.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipChestDataViewer.cxx:16:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/itkCIPMergeChestLabelMapsImageFilter.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/itkCIPMergeChestLabelMapsImageFilter.cxx:4:
In file included from /.../ChestImagingPlatform-release/Common/itkCIPMergeChestLabelMapsImageFilter.h:9:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4567


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipParticleConnectedComponentFilter.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipParticleConnectedComponentFilter.cxx:14:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4575


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipVesselParticleConnectedComponentFilter.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipVesselParticleConnectedComponentFilter.cxx:14:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4583


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipAirwayParticleConnectedComponentFilter.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipAirwayParticleConnectedComponentFilter.cxx:14:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4591


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipFissureParticleConnectedComponentFilter.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipFissureParticleConnectedComponentFilter.cxx:10:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4599


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipLeftLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipLeftLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx:11:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4608


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipRightLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipRightLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx:11:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4617


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipThinPlateSplineSurfaceModelToParticlesMetric.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipThinPlateSplineSurfaceModelToParticlesMetric.cxx:15:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4626


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipNelderMeadSimplexOptimizer.cxx.o
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipParticleToThinPlateSplineSurfaceMetric.cxx.o
[  9%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipHelper.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.cxx:11:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:
Build Log line 4637


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
[  9%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkSimpleLungMask.cxx.o
[  9%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageStatistics.cxx.o
[ 10%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipExceptionObject.cxx.o
[ 10%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestConventions.cxx.o
Linking CXX static library /.../ChestImagingPlatform-release-build/lib/libCIPCommon.a

ar: CMakeFiles/CIPCommon.dir/cipChestDataViewer.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/itkCIPMergeChestLabelMapsImageFilter.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/cipParticleConnectedComponentFilter.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/cipVesselParticleConnectedComponentFilter.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/cipAirwayParticleConnectedComponentFilter.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/cipFissureParticleConnectedComponentFilter.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/cipLeftLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/cipRightLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/cipThinPlateSplineSurfaceModelToParticlesMetric.cxx.o: No such file or directory

ar: CMakeFiles/CIPCommon.dir/cipHelper.cxx.o: No such file or directory

[ 10%] Built target CIPCommon
[ 10%] Building CXX object Common/CMakeFiles/ChestConventions.dir/cipChestConventions.cxx.o
Linking CXX static library /.../ChestImagingPlatform-release-build/lib/libChestConventions.a
[ 10%] Built target ChestConventions
Scanning dependencies of target CIPIO
[ 10%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipLobeSurfaceModelIO.cxx.o
[ 11%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipChestRegionChestTypeLocationsIO.cxx.o
[ 11%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipThinPlateSplineSurfaceIO.cxx.o
Linking CXX static library /.../ChestImagingPlatform-release-build/lib/libCIPIO.a
[ 11%] Built target CIPIO
Build Log line 4675


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
running build_ext
skipping '/.../ChestImagingPlatform-release/cip_python/wrap_ChestConventions.cpp' Cython extension (up-to-date)
[ 11%] Built target CIP_PYTHON
Scanning dependencies of target cipHelperTEST
[ 12%] Building CXX object Common/Testing/CMakeFiles/cipHelperTEST.dir/cipHelperTEST.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/Testing/cipHelperTEST.cxx:2:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX executable cipHelperTEST

clang: error: no such file or directory: 'CMakeFiles/cipHelperTEST.dir/cipHelperTEST.cxx.o'

[ 12%] Built target cipHelperTEST
[ 12%] Building CXX object Common/Testing/CMakeFiles/cipLobeSurfaceModelTEST.dir/cipLobeSurfaceModelTEST.cxx.o
Linking CXX executable cipLobeSurfaceModelTEST
ld: archive has no table of contents file '/.../ChestImagingPlatform-release-build/lib/libCIPCommon.a' for architecture x86_64

clang: error: linker command failed with exit code 1 (use -v to see invocation)

[ 12%] Built target cipLobeSurfaceModelTEST
Scanning dependencies of target cipNelderMeadSimplexOptimizerTEST
[ 13%] Building CXX object Common/Testing/CMakeFiles/cipNelderMeadSimplexOptimizerTEST.dir/cipNelderMeadSimplexOptimizerTEST.cxx.o
Linking CXX executable cipNelderMeadSimplexOptimizerTEST
ld: archive has no table of contents file '/.../ChestImagingPlatform-release-build/lib/libCIPCommon.a' for architecture x86_64

clang: error: linker command failed with exit code 1 (use -v to see invocation)

[ 13%] Built target cipNelderMeadSimplexOptimizerTEST
Scanning dependencies of target itkCIPExtractChestLabelMapImageFilterTEST
[ 13%] Building CXX object Common/Testing/CMakeFiles/itkCIPExtractChestLabelMapImageFilterTEST.dir/itkCIPExtractChestLabelMapImageFilterTEST.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/Testing/itkCIPExtractChestLabelMapImageFilterTEST.cxx:2:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4699


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX executable itkCIPExtractChestLabelMapImageFilterTEST

clang: error: no such file or directory: 'CMakeFiles/itkCIPExtractChestLabelMapImageFilterTEST.dir/itkCIPExtractChestLabelMapImageFilterTEST.cxx.o'

[ 13%] Built target itkCIPExtractChestLabelMapImageFilterTEST
Scanning dependencies of target itkCIPMergeChestLabelMapsImageFilterTEST
[ 14%] Building CXX object Common/Testing/CMakeFiles/itkCIPMergeChestLabelMapsImageFilterTEST.dir/itkCIPMergeChestLabelMapsImageFilterTEST.cxx.o
In file included from /.../ChestImagingPlatform-release/Common/Testing/itkCIPMergeChestLabelMapsImageFilterTEST.cxx:2:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4712


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX executable itkCIPMergeChestLabelMapsImageFilterTEST

clang: error: no such file or directory: 'CMakeFiles/itkCIPMergeChestLabelMapsImageFilterTEST.dir/itkCIPMergeChestLabelMapsImageFilterTEST.cxx.o'

[ 14%] Built target itkCIPMergeChestLabelMapsImageFilterTEST
[ 14%] Building CXX object IO/Testing/CMakeFiles/cipChestRegionChestTypeLocationsIOTEST.dir/cipChestRegionChestTypeLocationsIOTEST.cxx.o
Linking CXX executable cipChestRegionChestTypeLocationsIOTEST
ld: archive has no table of contents file '/.../ChestImagingPlatform-release-build/lib/libCIPCommon.a' for architecture x86_64

clang: error: unable to execute command: Segmentation fault: 11

clang: error: linker command failed due to signal (use -v to see invocation)

[ 14%] Built target cipChestRegionChestTypeLocationsIOTEST
[ 14%] Building CXX object IO/Testing/CMakeFiles/cipLobeSurfaceModelIOTEST.dir/cipLobeSurfaceModelIOTEST.cxx.o
Linking CXX executable cipLobeSurfaceModelIOTEST
ld: archive has no table of contents file '/.../ChestImagingPlatform-release-build/lib/libCIPCommon.a' for architecture x86_64

clang: error: unable to execute command: Segmentation fault: 11

clang: error: linker command failed due to signal (use -v to see invocation)

[ 14%] Built target cipLobeSurfaceModelIOTEST
Scanning dependencies of target ConvertDicomLib
[ 14%] Building CXX object CommandLineTools/ConvertDicom/CMakeFiles/ConvertDicomLib.dir/ConvertDicom.cxx.o
In file included from /.../ChestImagingPlatform-release/CommandLineTools/ConvertDicom/ConvertDicom.cxx:40:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4736


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX static library ../../bin/libConvertDicomLib.a

ar: CMakeFiles/ConvertDicomLib.dir/ConvertDicom.cxx.o: No such file or directory

[ 15%] Built target ConvertDicomLib
[ 15%] Building CXX object CommandLineTools/ConvertDicom/CMakeFiles/ConvertDicom.dir/.../ChestImagingPlatform-release-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o
Linking CXX executable ../../bin/ConvertDicom
ld: file too small (length=8) file '../../bin/libConvertDicomLib.a' for architecture x86_64

clang: error: linker command failed with exit code 1 (use -v to see invocation)

[ 15%] Built target ConvertDicom
Scanning dependencies of target ConvertDicomTest
[ 15%] Building CXX object CommandLineTools/ConvertDicom/CMakeFiles/ConvertDicomTest.dir/Testing/ConvertDicomTest.cxx.o
In file included from /.../ChestImagingPlatform-release/CommandLineTools/ConvertDicom/Testing/ConvertDicomTest.cxx:1:
In file included from /.../ChestImagingPlatform-release/CommandLineTools/Testing/itkTestMain.h:44:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4754


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX executable ../Testing/bin/ConvertDicomTest

clang: error: no such file or directory: 'CMakeFiles/ConvertDicomTest.dir/Testing/ConvertDicomTest.cxx.o'

[ 15%] Built target ConvertDicomTest
[ 15%] Building CXX object CommandLineTools/MergeParticleDataSets/CMakeFiles/MergeParticleDataSetsLib.dir/MergeParticleDataSets.cxx.o
Linking CXX static library ../../bin/libMergeParticleDataSetsLib.a
[ 16%] Built target MergeParticleDataSetsLib
[ 16%] Building CXX object CommandLineTools/MergeParticleDataSets/CMakeFiles/MergeParticleDataSets.dir/.../ChestImagingPlatform-release-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o
Linking CXX executable ../../bin/MergeParticleDataSets
ld: archive has no table of contents file '/.../ChestImagingPlatform-release-build/lib/libCIPCommon.a' for architecture x86_64

clang: error: linker command failed with exit code 1 (use -v to see invocation)

[ 16%] Built target MergeParticleDataSets
Scanning dependencies of target MergeParticleDataSetsTest
[ 16%] Building CXX object CommandLineTools/MergeParticleDataSets/CMakeFiles/MergeParticleDataSetsTest.dir/Testing/MergeParticleDataSetsTest.cxx.o
In file included from /.../ChestImagingPlatform-release/CommandLineTools/MergeParticleDataSets/Testing/MergeParticleDataSetsTest.cxx:1:
In file included from /.../ChestImagingPlatform-release/CommandLineTools/Testing/itkTestMain.h:44:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4775


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX executable ../Testing/bin/MergeParticleDataSetsTest

clang: error: no such file or directory: 'CMakeFiles/MergeParticleDataSetsTest.dir/Testing/MergeParticleDataSetsTest.cxx.o'

[ 16%] Built target MergeParticleDataSetsTest
[ 16%] Building CXX object CommandLineTools/RemoveParticlesFromParticlesDataSet/CMakeFiles/RemoveParticlesFromParticlesDataSetLib.dir/RemoveParticlesFromParticlesDataSet.cxx.o
Linking CXX static library ../../bin/libRemoveParticlesFromParticlesDataSetLib.a
[ 16%] Built target RemoveParticlesFromParticlesDataSetLib
[ 17%] Building CXX object CommandLineTools/RemoveParticlesFromParticlesDataSet/CMakeFiles/RemoveParticlesFromParticlesDataSet.dir/.../ChestImagingPlatform-release-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o
Linking CXX executable ../../bin/RemoveParticlesFromParticlesDataSet
ld: archive has no table of contents file '/.../ChestImagingPlatform-release-build/lib/libCIPCommon.a' for architecture x86_64

clang: error: linker command failed with exit code 1 (use -v to see invocation)

[ 17%] Built target RemoveParticlesFromParticlesDataSet
Scanning dependencies of target RemoveParticlesFromParticlesDataSetTest
[ 18%] Building CXX object CommandLineTools/RemoveParticlesFromParticlesDataSet/CMakeFiles/RemoveParticlesFromParticlesDataSetTest.dir/Testing/RemoveParticlesFromParticlesDataSetTest.cxx.o
In file included from /.../ChestImagingPlatform-release/CommandLineTools/RemoveParticlesFromParticlesDataSet/Testing/RemoveParticlesFromParticlesDataSetTest.cxx:1:
In file included from /.../ChestImagingPlatform-release/CommandLineTools/Testing/itkTestMain.h:44:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4796


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX executable ../Testing/bin/RemoveParticlesFromParticlesDataSetTest

clang: error: no such file or directory: 'CMakeFiles/RemoveParticlesFromParticlesDataSetTest.dir/Testing/RemoveParticlesFromParticlesDataSetTest.cxx.o'

[ 18%] Built target RemoveParticlesFromParticlesDataSetTest
Scanning dependencies of target ExtractParticlesFromChestRegionChestTypeLib
[ 19%] Building CXX object CommandLineTools/ExtractParticlesFromChestRegionChestType/CMakeFiles/ExtractParticlesFromChestRegionChestTypeLib.dir/ExtractParticlesFromChestRegionChestType.cxx.o
In file included from /.../ChestImagingPlatform-release/CommandLineTools/ExtractParticlesFromChestRegionChestType/ExtractParticlesFromChestRegionChestType.cxx:71:
In file included from /.../ChestImagingPlatform-release/Common/cipHelper.h:22:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:

Build Log line 4809


  File: ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h
  Line: 24 
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found

#  include <type_traits>
           ^
1 error generated.
Linking CXX static library ../../bin/libExtractParticlesFromChestRegionChestTypeLib.a

ar: CMakeFiles/ExtractParticlesFromChestRegionChestTypeLib.dir/ExtractParticlesFromChestRegionChestType.cxx.o: No such file or directory

[ 19%] Built target ExtractParticlesFromChestRegionChestTypeLib
[ 19%] Building CXX object CommandLineTools/ExtractParticlesFromChestRegionChestType/CMakeFiles/ExtractParticlesFromChestRegionChestType.dir/.../ChestImagingPlatform-release-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o
Linking CXX executable ../../bin/ExtractParticlesFromChestRegionChestType
ld: file too small (length=8) file '../../bin/libExtractParticlesFromChestRegionChestTypeLib.a' for architecture x86_64

clang: error: linker command failed with exit code 1 (use -v to see invocation)

[ 19%] Built target ExtractParticlesFromChestRegionChestType
Scanning dependencies of target ExtractParticlesFromChestRegionChestTypeTest
[ 19%] Building CXX object CommandLineTools/ExtractParticlesFromChestRegionChestType/CMakeFiles/ExtractParticlesFromChestRegionChestTypeTest.dir/Testing/ExtractParticlesFromChestRegionChestTypeTest.cxx.o
In file included from /.../ChestImagingPlatform-release/CommandLineTools/ExtractParticlesFromChestRegionChestType/Testing/ExtractParticlesFromChestRegionChestTypeTest.cxx:1:
In file included from /.../ChestImagingPlatform-release/CommandLineTools/Testing/itkTestMain.h:44:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.h:228:
In file included from /.../ChestImagingPlatform-release-build/ITKv4/Modules/IO/ImageBase/include/itkImageFileWriter.hxx:34:
/.../ChestImagingPlatform-release-build/ITKv4/Modules/Core/Common/include/itkImageAlgorithm.h:24:12: fatal error: 'type_traits' file not found
#  include <type_traits>
           ^
The maximum number of reported warnings or errors has been reached!!!

View Errors Summary


Build Warnings (3)
Linking CXX shared library ../../lib/libvtkViewsInfovis-6.2.dylib
[100%] Built target vtkViewsInfovis
[ 35%] No install step for 'VTKv6'
[ 36%] Completed 'VTKv6'
[ 42%] Built target VTKv6
[ 43%] Performing update step (SVN update) for 'teem'
Updating '.':
At revision 6222.
[ 45%] Performing configure step for 'teem'
loading initial cache file /.../ChestImagingPlatform-release-build/teem-prefix/tmp/teem-cache.cmake

CMake Warning (dev) at CMakeLists.txt:451 (EXPORT_LIBRARY_DEPENDENCIES):

  Policy CMP0033 is not set: The export_library_dependencies command should
  not be called.  Run "cmake --help-policy CMP0033" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done
-- Generating done

CMake Warning (dev):

  Policy CMP0042 is not set: MACOSX_RPATH is enabled by default.  Run "cmake
  --help-policy CMP0042" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

  MACOSX_RPATH is not specified for the following targets:

   teem

This warning is for project developers.  Use -Wno-dev to suppress it.

[100%] Built target ITKVideoIO
[100%] Built target ITKVideoIO-all
[ 63%] No install step for 'ITKv4'
[ 64%] Completed 'ITKv4'
[ 70%] Built target ITKv4
[ 71%] Performing update step for 'SlicerExecutionModel'
[ 73%] Performing configure step for 'SlicerExecutionModel'
loading initial cache file /.../ChestImagingPlatform-release-build/SlicerExecutionModel-prefix/tmp/SlicerExecutionModel-cache.cmake
-- Configuring done
-- Generating done

CMake Warning (dev):

  Policy CMP0042 is not set: MACOSX_RPATH is enabled by default.  Run "cmake
  --help-policy CMP0042" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

  MACOSX_RPATH is not specified for the following targets:

   ModuleDescriptionParser

This warning is for project developers.  Use -Wno-dev to suppress it.


View Warnings Summary


Test (3  passed, 72 failed, 4 not run)
 
View Tests Summary