Site Name: bwh002376.bwh.harvard.edu
Build Name: ChestImagingPlatform-release-Darwin-13.4.0-x86_64-incr-SL-ON (view notes)
Stamp: 20150407-0400-Nightly (related builds)
Time: 2015-04-07T16:53:29 EDT
Type: Nightly

OS Name: Mac OS X
OS Platform: x86_64
OS Release: 10.9.5
OS Version: 13F34
Compiler Version: unknown
CTest version: ctest-3.0.2

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Stage: Update (0 errors, 0 warnings)

Start Time: 2015-04-07T16:53:26 EDT
End Time: 2015-04-07T16:53:27 EDT
Update Command: "/Applications/GitHub.app/Contents/Resources/git/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2015-04-07T16:53:28 EDT
End Time: 2015-04-07T16:53:28 EDT
Configure Command: /Users/acil-user/Library/Enthought/Canopy_64bit/User/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/Users/acil-user/Projects/ChestImagingPlatform-release"
Configure Return Value: 0
Configure Output:
-- The C compiler identification is AppleClang 6.0.0.6000056
-- The CXX compiler identification is AppleClang 6.0.0.6000056
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
----------- ENTRY ------------
Configuring Superbuild...
-- Found Git: /Applications/GitHub.app/Contents/Resources/git/bin/git (found version "1.8.4") 
-- SuperBuild - First pass
-- SuperBuild - First pass - done
-- SuperBuild - CIP => Requires SlicerExecutionModel, ITKv4, VTKv6, Boost[INCLUDED], teem, 
-- SuperBuild -   SlicerExecutionModel => Requires ITKv4, 
-- SuperBuild -     ITKv4 => Requires zlib, 
-- SuperBuild -       zlib[OK]
-- SuperBuild -       ZLIB_INCLUDE_DIR:/Users/acil-user/Projects/ChestImagingPlatform-release-build/CIP-build/zlib-install/include
-- SuperBuild -       ZLIB_LIBRARY:/Users/acil-user/Projects/ChestImagingPlatform-release-build/CIP-build/zlib-install/lib/libzlib.a
-- SuperBuild -       ZLIB_ROOT:/Users/acil-user/Projects/ChestImagingPlatform-release-build/CIP-build/zlib-install
-- SuperBuild -     ITKv4[OK]
-- SuperBuild -   SlicerExecutionModel[OK]
-- SuperBuild -   VTKv6 => Requires zlib[INCLUDED], 
-- SuperBuild -   VTKv6[OK]
-- SuperBuild -   PNG_INCLUDE_DIR:/Users/acil-user/Projects/ChestImagingPlatform-release-build/CIP-build/VTKv6/Utilities/vtkpng
-- SuperBuild -   PNG_LIBRARY:/Users/acil-user/Projects/ChestImagingPlatform-release-build/CIP-build/VTKv6-build/bin/libvtkpng.dylib
-- SuperBuild -   teem => Requires zlib[INCLUDED], VTKv6[INCLUDED], 
-- SuperBuild -   teem[OK]
-- Found Subversion: /usr/bin/svn (found version "1.7.17") 
-- SuperBuild - CIP[OK]
----------- DONE ------------
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/acil-user/Projects/ChestImagingPlatform-release-build/CIP-build

View Configure Summary

Build (0 errors, 9 warnings)

Build command: -- -i
Start Time: 2015-04-07T16:53:29 EDT
End Time: 2015-04-07T17:30:59 EDT

View Errors Summary

Build Warnings (9)

Build Log line 230


File: /Users/acil-user/Projects/ChestImagingPlatform-release-build/libs/coroutine/src/detail/standard_stack_allocator_posix.cpp Line: 61
darwin.archive bin.v2/libs/context/build/darwin-4.2.1/release/link-static/threading-multi/libboost_context.a
common.copy /.../ChestImagingPlatform-release-build/Boost-install/lib/libboost_context.a
common.mkdir bin.v2/libs/coroutine
common.mkdir bin.v2/libs/coroutine/build
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1/release
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi/detail
darwin.compile.c++ bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi/detail/standard_stack_allocator_posix.o
libs/coroutine/src/detail/standard_stack_allocator_posix.cpp:61:15: warning: unused variable 'result' [-Wunused-variable]
    const int result = ::getrlimit( RLIMIT_STACK, & limit);
              ^

Build Log line 233


File: /Users/acil-user/Projects/ChestImagingPlatform-release-build/libs/coroutine/src/detail/standard_stack_allocator_posix.cpp Line: 135
libs/coroutine/src/detail/standard_stack_allocator_posix.cpp:135:15: warning: unused variable 'result' [-Wunused-variable]
    const int result( ::mprotect( limit, detail::pagesize(), PROT_NONE) );
              ^
2 warnings generated.
darwin.compile.c++ bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi/detail/coroutine_context.o
darwin.archive bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi/libboost_coroutine.a
common.copy /.../ChestImagingPlatform-release-build/Boost-install/lib/libboost_coroutine.a
common.mkdir /.../ChestImagingPlatform-release-build/Boost-install/include
common.mkdir /.../ChestImagingPlatform-release-build/Boost-install/include/boost
common.copy /.../ChestImagingPlatform-release-build/Boost-install/include/boost/aligned_storage.hpp
common.copy /.../ChestImagingPlatform-release-build/Boost-install/include/boost/any.hpp
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found X11: /usr/X11R6/lib/libX11.dylib
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Check the value of the 22nd bit of a 32-bit quiet-NaN
-- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1
-- Found ZLIB: /.../ChestImagingPlatform-release-build/zlib-install/lib/libzlib.a (found version "1.2.3") 
CMake Warning (dev) at CMakeLists.txt:451 (EXPORT_LIBRARY_DEPENDENCIES):
  Policy CMP0033 is not set: The export_library_dependencies command should
  not be called.  Run "cmake --help-policy CMP0033" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done
CMake Warning (dev):
  Policy CMP0042 is not set: MACOSX_RPATH is enabled by default.  Run "cmake
  --help-policy CMP0042" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

  MACOSX_RPATH is not specified for the following targets:

   teem

This warning is for project developers.  Use -Wno-dev to suppress it.
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Setting build type to 'Debug' as none was specified.
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Configuring done
CMake Warning (dev):
  Policy CMP0042 is not set: MACOSX_RPATH is enabled by default.  Run "cmake
  --help-policy CMP0042" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

  MACOSX_RPATH is not specified for the following targets:

   ModuleDescriptionParser

This warning is for project developers.  Use -Wno-dev to suppress it.

Build Log line 20667


File: Common/itkCIPMergeChestLabelMapsImageFilter.cxx Line: 1
Linking CXX static library /.../ChestImagingPlatform-release-build/lib/libCIPUtilities.a
[  3%] Built target CIPUtilities
Scanning dependencies of target CIPCommon
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipThinPlateSplineSurface.cxx.o
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipLobeSurfaceModel.cxx.o
[  4%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestRegionChestTypeLocations.cxx.o
[  4%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipSphereStencil.cxx.o
[  4%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipCylinderStencil.cxx.o
[  5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestDataViewer.cxx.o
[  5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/itkCIPMergeChestLabelMapsImageFilter.cxx.o
/.../ChestImagingPlatform-release/Common/itkCIPMergeChestLabelMapsImageFilter.cxx:1:9: warning: '_itCIPkMergeChestLabelMapsImageFilter_txx' is used as a header guard here, followed by #define of a different macro [-Wheader-guard]
#ifndef _itCIPkMergeChestLabelMapsImageFilter_txx
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Build Log line 20670


File: Common/itkCIPMergeChestLabelMapsImageFilter.cxx Line: 2
/.../ChestImagingPlatform-release/Common/itkCIPMergeChestLabelMapsImageFilter.cxx:2:9: note: '_itkCIPMergeChestLabelMapsImageFilter_txx' is defined here; did you mean '_itCIPkMergeChestLabelMapsImageFilter_txx'?
#define _itkCIPMergeChestLabelMapsImageFilter_txx
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        _itCIPkMergeChestLabelMapsImageFilter_txx
1 warning generated.
[  5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipParticleConnectedComponentFilter.cxx.o
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipVesselParticleConnectedComponentFilter.cxx.o
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipAirwayParticleConnectedComponentFilter.cxx.o
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipFissureParticleConnectedComponentFilter.cxx.o
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipLeftLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx.o
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipRightLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx.o

Build Log line 20956


File: CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx Line: 298
Scanning dependencies of target SegmentLungLobesTest
[ 32%] Building CXX object CommandLineTools/SegmentLungLobes/CMakeFiles/SegmentLungLobesTest.dir/Testing/SegmentLungLobesTest.cxx.o
Linking CXX executable ../Testing/bin/SegmentLungLobesTest
[ 32%] Built target SegmentLungLobesTest
[ 32%] Generating ReadDicomWriteTagsCLP.h
GenerateCLP --InputXML /.../ChestImagingPlatform-release/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.xml --OutputCxx /.../ChestImagingPlatform-release-build/CIP-build/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTagsCLP.h
GenerateCLP: Found 1 parameters groups
GenerateCLP: Group "IO" has 4 parameters
Scanning dependencies of target ReadDicomWriteTagsLib
[ 33%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTagsLib.dir/ReadDicomWriteTags.cxx.o
/.../ChestImagingPlatform-release/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:298:28: warning: comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]
        if ( commaLocation != std::string::npos )
             ~~~~~~~~~~~~~ ^  ~~~~~~~~~~~~~~~~~

Build Log line 20959


File: CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx Line: 304
/.../ChestImagingPlatform-release/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:304:30: warning: comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]
        if ( newlineLocation != std::string::npos )
             ~~~~~~~~~~~~~~~ ^  ~~~~~~~~~~~~~~~~~
2 warnings generated.
Linking CXX static library ../../bin/libReadDicomWriteTagsLib.a
[ 33%] Built target ReadDicomWriteTagsLib
Scanning dependencies of target ReadDicomWriteTags
[ 33%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTags.dir/.../ChestImagingPlatform-release-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o
Linking CXX executable ../../bin/ReadDicomWriteTags
[ 33%] Built target ReadDicomWriteTags
Scanning dependencies of target ReadDicomWriteTagsTest

View Warnings Summary

Test (42 passed, 37 failed, 0 not run)
View Tests Summary