Site Name: Linux1.Amazon.ACIL
Build Name: CIP-master-Linux-3.14.35-28.38.amzn1.x86_64-x86_64-incr-SL-ON (view notes)
Stamp: 20160207-0400-Nightly (related builds)
Time: 2016-02-07T00:16:11 EST
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.14.35-28.38.amzn1.x86_64
OS Version: #1 SMP Wed Mar 11 22:50:37 UTC 2015
Compiler Version: unknown
CTest version: ctest-2.8.12

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Stage: Update (0 errors, 0 warnings)

Start Time: 2016-02-07T00:15:38 EST
End Time: 2016-02-07T00:15:39 EST
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2016-02-07T00:15:40 EST
End Time: 2016-02-07T00:16:10 EST
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/home/ec2-user/Projects/CIP-master"
Configure Return Value: 0
Configure Output: 
----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
ChestConv: ON
----------- DONE ------------
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull
-- Configuring SEM CLI module: RegisterLungAtlas
-- Configuring SEM CLI module: ResampleLabelMap
-- Configuring SEM CLI module: RescaleLabelMap
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ScourParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateRegionHistogramsAndParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: TransferFieldDataToFromPointData
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric
-- Configuring SEM CLI module: GetTransformationKappa2D
-- Configuring SEM CLI module: GetTransformationKappa
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: ReadVidaWriteCIP
-- Configuring SEM CLI module: RegisterLabelMaps
-- Configuring SEM CLI module: RegisterCT
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue
-- Configuring SEM CLI module: FilterConnectedComponents
-- Configuring SEM CLI module: EnhanceFissuresInImage
-- Configuring SEM CLI module: ComputeFissureFeatureVectors
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring SEM CLI module: GenerateLesionSegmentation
-- Configuring SEM CLI module: RemapLabelMap
-- Configuring SEM CLI module: GenerateNLMFilteredImage
-- Configuring SEM CLI module: ComputeAirwayWallFromParticles
Wrapping ChestConventions
-- Configuring done
-- Generating done
-- Build files have been written to: /home/ec2-user/Projects/CIP-master-build/CIP-build

View Configure Summary

Build (9 errors, 0 warnings)

Build command: /usr/bin/gmake -i
Start Time: 2016-02-07T00:16:11 EST
End Time: 2016-02-07T00:17:53 EST

[ 22%] Built target ConvertDicomTest
[ 23%] Built target MergeParticleDataSetsLib
[ 23%] Built target MergeParticleDataSets
[ 23%] Built target MergeParticleDataSetsTest
[ 23%] Built target RemoveParticlesFromParticlesDataSetLib
[ 24%] Built target RemoveParticlesFromParticlesDataSet
[ 24%] Built target RemoveParticlesFromParticlesDataSetTest
[ 25%] Built target ExtractParticlesFromChestRegionChestTypeLib
[ 25%] Built target ExtractParticlesFromChestRegionChestType
Linking CXX executable ../Testing/bin/ExtractParticlesFromChestRegionChestTypeTest

collect2: error: ld returned 1 exit status

[ 25%] Built target ExtractParticlesFromChestRegionChestTypeTest
[ 26%] Built target GenerateOtsuLungCastLib
[ 26%] Built target GenerateOtsuLungCast
Linking CXX executable ../Testing/bin/GenerateOtsuLungCastTest

collect2: error: ld returned 1 exit status

[ 26%] Built target GenerateOtsuLungCastTest
[ 26%] Built target GenerateAtlasConvexHullLib
[ 26%] Built target GenerateAtlasConvexHull
[ 27%] Built target GenerateAtlasConvexHullTest
[ 27%] Built target RegisterLungAtlasLib
[ 27%] Built target RegisterLungAtlas
[ 28%] Built target RegisterLungAtlasTest
[ 29%] Built target ResampleLabelMapLib
[ 29%] Built target ResampleLabelMap
[ 29%] Built target ResampleLabelMapTest
[ 35%] Built target SegmentLungLobes
[ 36%] Built target SegmentLungLobesTest
[ 37%] Built target ReadDicomWriteTagsLib
[ 37%] Built target ReadDicomWriteTags
[ 37%] Built target ReadDicomWriteTagsTest
[ 38%] Built target SplitLeftLungRightLungLib
[ 38%] Built target SplitLeftLungRightLung
[ 38%] Built target SplitLeftLungRightLungTest
[ 39%] Built target ExtractChestLabelMapLib
Linking CXX executable ../../bin/ExtractChestLabelMap

collect2: error: ld returned 1 exit status

[ 39%] Built target ExtractChestLabelMap
[ 39%] Built target ExtractChestLabelMapTest
[ 39%] Built target LabelParticlesByChestRegionChestTypeLib
[ 40%] Built target LabelParticlesByChestRegionChestType
[ 41%] Built target LabelParticlesByChestRegionChestTypeTest
[ 42%] Built target GenerateStenciledLabelMapFromParticlesLib
Linking CXX executable ../../bin/GenerateStenciledLabelMapFromParticles

collect2: error: ld returned 1 exit status

[ 42%] Built target GenerateStenciledLabelMapFromParticles
Linking CXX executable ../Testing/bin/GenerateStenciledLabelMapFromParticlesTest

collect2: error: ld returned 1 exit status

[ 42%] Built target GenerateStenciledLabelMapFromParticlesTest
[ 43%] Built target GenerateDistanceMapFromLabelMapLib
[ 43%] Built target GenerateDistanceMapFromLabelMap
[ 43%] Built target GenerateDistanceMapFromLabelMapTest
[ 44%] Built target FilterVesselParticleDataLib
Linking CXX executable ../../bin/FilterVesselParticleData

collect2: error: ld returned 1 exit status

[ 44%] Built target FilterVesselParticleData
[ 44%] Built target FilterVesselParticleDataTest
[ 45%] Built target FilterAirwayParticleDataLib
[ 45%] Built target FilterAirwayParticleData
[ 45%] Built target FilterAirwayParticleDataTest
[ 46%] Built target ScourParticleDataLib
[ 46%] Built target ScourParticleData
[ 46%] Built target ScourParticleDataTest
[ 47%] Built target ReadNRRDsWriteVTKLib
[ 47%] Built target ReadNRRDsWriteVTK
[ 59%] Built target EvaluateLungLobeSegmentationResultsTest
[ 60%] Built target ConvertLabelMapValueToChestRegionChestTypeLib
[ 60%] Built target ConvertLabelMapValueToChestRegionChestType
[ 60%] Built target ConvertLabelMapValueToChestRegionChestTypeTest
[ 60%] Built target GenerateRegionHistogramsAndParenchymaPhenotypesLib
[ 60%] Built target GenerateRegionHistogramsAndParenchymaPhenotypes
[ 61%] Built target GenerateRegionHistogramsAndParenchymaPhenotypesTest
[ 61%] Built target ComputeDistanceMapLib
[ 62%] Built target ComputeDistanceMap
Linking CXX executable ../Testing/bin/ComputeDistanceMapTest

collect2: error: ld returned 1 exit status

[ 63%] Built target ComputeDistanceMapTest
[ 64%] Built target TransferFieldDataToFromPointDataLib
[ 64%] Built target TransferFieldDataToFromPointData
[ 64%] Built target TransferFieldDataToFromPointDataTest
[ 64%] Built target PerturbParticlesLib
[ 64%] Built target PerturbParticles
[ 65%] Built target PerturbParticlesTest
[ 66%] Built target ReadWriteRegionAndTypePointsLib
[ 66%] Built target ReadWriteRegionAndTypePoints
[ 66%] Built target ReadWriteRegionAndTypePointsTest
[ 69%] Built target GenerateOverlayImages
[ 69%] Built target GenerateOverlayImagesTest
[ 70%] Built target GetTransformationSimilarityMetricLib
[ 70%] Built target GetTransformationSimilarityMetric
[ 70%] Built target GetTransformationSimilarityMetricTest
[ 71%] Built target GetTransformationKappa2DLib
[ 71%] Built target GetTransformationKappa2D
[ 71%] Built target GetTransformationKappa2DTest
[ 72%] Built target GetTransformationKappaLib
Linking CXX executable ../../bin/GetTransformationKappa

collect2: error: ld returned 1 exit status

[ 73%] Built target GetTransformationKappa
[ 73%] Built target GetTransformationKappaTest
[ 74%] Built target ReadWriteImageDataLib
[ 74%] Built target ReadWriteImageData
[ 74%] Built target ReadWriteImageDataTest
[ 74%] Built target GetStructuresInLabelMapLib
[ 75%] Built target GetStructuresInLabelMap
[ 75%] Built target GetStructuresInLabelMapTest
[ 75%] Built target GeneratePartialLungLabelMapLib
[ 76%] Built target GeneratePartialLungLabelMap
[ 88%] Built target GenerateBinaryThinning3DTest
[ 88%] Built target ConvertChestRegionChestTypeToLabelMapValueLib
[ 89%] Built target ConvertChestRegionChestTypeToLabelMapValue
[ 89%] Built target ConvertChestRegionChestTypeToLabelMapValueTest
[ 89%] Built target FilterConnectedComponentsHelper
[ 90%] Built target FilterConnectedComponentsLib
[ 91%] Built target FilterConnectedComponents
[ 91%] Built target FilterConnectedComponentsTest
[ 92%] Built target EnhanceFissuresInImageLib
Linking CXX executable ../../bin/EnhanceFissuresInImage

collect2: error: ld returned 1 exit status

[ 92%] Built target EnhanceFissuresInImage
[ 92%] Built target EnhanceFissuresInImageTest
[ 93%] Built target ComputeFissureFeatureVectorsLib
[ 93%] Built target ComputeFissureFeatureVectors
[ 93%] Built target ComputeFissureFeatureVectorsTest
[ 93%] Built target FitLobeSurfaceModelsToParticleDataLib
[ 94%] Built target FitLobeSurfaceModelsToParticleData
[ 95%] Built target FitLobeSurfaceModelsToParticleDataTest
[ 95%] Built target GenerateLesionSegmentationLib
[ 96%] Built target GenerateLesionSegmentation
View Errors Summary


Build Warnings (0)

View Warnings Summary


Test (48  passed, 10 failed, 4 not run)
 
View Tests Summary