error: Untracked working tree file '.NoDartCoverage' would be overwritten by merge.
fatal: unable to checkout working tree
warning: Clone succeeded, but checkout failed.
You can inspect what was checked out with 'git status'
and retry the checkout with 'git checkout -f HEAD'

fatal: destination path 'zlib' already exists and is not an empty directory.
fatal: destination path 'zlib' already exists and is not an empty directory.
-- Had to git clone more than once:
          3 times.

CMake Error at zlib-prefix/tmp/zlib-gitclone.cmake:40 (message):

  Failed to clone repository: 'git://github.com/commontk/zlib.git'


[ 13%] No patch step for 'zlib'
[ 14%] Performing update step for 'zlib'
[ 16%] Performing configure step for 'zlib'
loading initial cache file /.../CIP-build/zlib-prefix/tmp/zlib-cache.cmake
-- The C compiler identification is unknown
-- The CXX compiler identification is unknown
-- Check for working C compiler: /usr/bin/cc

-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++

CMake Error at /usr/share/cmake/Modules/CMakeCXXInformation.cmake:37 (get_filename_component):

  get_filename_component called with incorrect number of arguments
Call Stack (most recent call first):
  CMakeLists.txt:2 (PROJECT)

CMake Error: Internal CMake error, TryCompile configure of cmake failed

-- Check for working CXX compiler: /usr/bin/c++ -- broken

CMake Error at /usr/share/cmake/Modules/CMakeTestCXXCompiler.cmake:54 (message):

  The C++ compiler "/usr/bin/c++" is not able to compile a simple test
  program.

  It fails with the following output:

   

  

  CMake will not be able to correctly generate this project.

Call Stack (most recent call first):
  CMakeLists.txt:3 (PROJECT)


-- Configuring incomplete, errors occurred!
See also "/.../CIP-build/zlib-build/CMakeFiles/CMakeOutput.log".
See also "/.../CIP-build/zlib-build/CMakeFiles/CMakeError.log".
[ 19%] Performing build step for 'zlib'

gmake[3]: *** No targets specified and no makefile found.  Stop.

[ 20%] Performing install step for 'zlib'

gmake[3]: *** No rule to make target `install'.  Stop.

[ 20%] Completed 'zlib'
[ 22%] Built target zlib
[ 22%] Performing download step (git clone) for 'VTKv7'
Cloning into 'VTKv7'...
warning: Duplicated ref: refs/remotes/origin/master
warning: Duplicated ref: refs/remotes/origin/slicer-3.6
warning: Duplicated ref: refs/remotes/origin/slicer-4.0
warning: Duplicated ref: refs/remotes/origin/slicer-4.0-gamma
warning: Duplicated ref: refs/remotes/origin/slicer-4.1
warning: Duplicated ref: refs/remotes/origin/slicer-4.1-v5.10.0

git process crashed in this repository earlier. Make sure no other git
process is running and remove the file manually to continue.
warning: Clone succeeded, but checkout failed.
You can inspect what was checked out with 'git status'
and retry the checkout with 'git checkout -f HEAD'

fatal: destination path 'VTKv7' already exists and is not an empty directory.
fatal: destination path 'VTKv7' already exists and is not an empty directory.
-- Had to git clone more than once:
          3 times.

CMake Error at VTKv7-prefix/tmp/VTKv7-gitclone.cmake:40 (message):

  Failed to clone repository: 'git://github.com/Slicer/VTK.git'


[ 23%] No patch step for 'VTKv7'
[ 24%] Performing update step for 'VTKv7'
[ 25%] Performing configure step for 'VTKv7'
loading initial cache file /.../CIP-build/VTKv7-prefix/tmp/VTKv7-cache.cmake
-- The C compiler identification is GNU 4.8.2
-- The CXX compiler identification is GNU 4.8.2
-- Check for working C compiler: /usr/bin/cc

-- Performing Test VTK_HAS_STD_ISNAN - Success
-- Performing Test VTK_HAS_STD_ISINF
-- Performing Test VTK_HAS_STD_ISINF - Success
-- Performing Test VTK_HAS_STD_ISFINITE
-- Performing Test VTK_HAS_STD_ISFINITE - Success
-- Looking for isnan
-- Looking for isnan - found
-- Looking for isinf
-- Looking for isinf - found
-- Looking for isfinite

CMake Error at CMakeLists.txt:11 (ADD_EXECUTABLE):

  Cannot find source file:

    /.../CIP-build/VTKv7-build/CMakeFiles/CMakeTmp/CheckSymbolExists.c

  Tried extensions .c .C .c++ .cc .cpp .cxx .m .M .mm .h .hh .h++ .hm .hpp
  .hxx .in .txx

CMake Error: Internal CMake error, TryCompile generation of cmake failed

-- Looking for isfinite - not found
-- Looking for finite
-- Looking for finite - found
-- Looking for fenv.h
-- Looking for fenv.h - found
-- Looking for feenableexcept
-- Looking for feenableexcept - found
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY

-- Looking for C++ include fcntl.h - found
-- Looking for C++ include unistd.h
-- Looking for C++ include unistd.h - found
-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so
-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - not found
-- Looking for gethostbyname in nsl
-- Looking for gethostbyname in nsl - not found
-- Looking for gethostbyname in bsd

CMake Error: The source directory "/.../CIP-build/VTKv7-build/CMakeFiles/CMakeTmp" does not appear to contain CMakeLists.txt.

Specify --help for usage, or press the help button on the CMake GUI.

CMake Error: Internal CMake error, TryCompile configure of cmake failed

-- Looking for gethostbyname in bsd - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found X11: /usr/lib64/libX11.so

-- Looking for include file search.h - found
-- Looking for include file stdlib.h
-- Looking for include file stdlib.h - found
-- Looking for include file string.h
-- Looking for include file string.h - found
-- Looking for include file strings.h
-- Looking for include file strings.h - found
-- Looking for include file sys/stat.h
-- Looking for include file sys/stat.h - not found
-- Looking for include file sys/time.h

CMake Error: The source directory "/.../CIP-build/VTKv7-build/CMakeFiles/CMakeTmp" does not appear to contain CMakeLists.txt.

Specify --help for usage, or press the help button on the CMake GUI.
-- Looking for include file sys/time.h - not found
-- Looking for include file windows.h

CMake Error: The source directory "/.../CIP-build/VTKv7-build/CMakeFiles/CMakeTmp" does not appear to contain CMakeLists.txt.

Specify --help for usage, or press the help button on the CMake GUI.

CMake Error: Internal CMake error, TryCompile configure of cmake failed

-- Looking for include file windows.h - not found
-- Looking for include file ieeefp.h
-- Looking for include file ieeefp.h - not found
-- Looking for floor
-- Looking for floor - not found
-- Looking for getopt
-- Looking for getopt - not found
-- Looking for isascii
-- Looking for isascii - not found
-- Looking for memmove

-- Looking for clock_gettime - not found
-- Looking for clock_gettime in rt
-- Looking for clock_gettime in rt - not found
-- Looking for clock_gettime in posix4
-- Looking for clock_gettime in posix4 - not found
-- Looking for include file sys/resource.h
-- Looking for include file sys/resource.h - not found
-- Looking for include file sys/time.h
-- Looking for include file sys/time.h - not found
-- Looking for include file unistd.h

CMake Error at CMakeLists.txt:11 (ADD_EXECUTABLE):

  Cannot find source file:

    /.../CIP-build/VTKv7-build/CMakeFiles/CMakeTmp/CheckIncludeFiles.c

  Tried extensions .c .C .c++ .cc .cpp .cxx .m .M .mm .h .hh .h++ .hm .hpp
  .hxx .in .txx

CMake Error: Internal CMake error, TryCompile generation of cmake failed

-- Looking for include file unistd.h - not found
-- Looking for include file sys/ioctl.h
-- Looking for include file sys/ioctl.h - not found
-- Looking for include file sys/stat.h
-- Looking for include file sys/stat.h - not found
-- Looking for include file sys/socket.h
-- Looking for include file sys/socket.h - not found
-- Looking for include file sys/types.h

CMake Error at CMakeLists.txt:11 (ADD_EXECUTABLE):

  Cannot find source file:

    /.../CIP-build/VTKv7-build/CMakeFiles/CMakeTmp/CheckIncludeFiles.c

  Tried extensions .c .C .c++ .cc .cpp .cxx .m .M .mm .h .hh .h++ .hm .hpp
  .hxx .in .txx

CMake Error: Internal CMake error, TryCompile generation of cmake failed

-- Looking for include file sys/types.h - not found
-- Looking for include file stddef.h
-- Looking for include file stddef.h - not found
-- Looking for include file setjmp.h

CMake Error: Could not find cmake module file: CMakeCInformation.cmake

terminate called after throwing an instance of 'std::logic_error'
  what():  basic_string::_S_construct null not valid
/bin/sh: line 1: 22540 Aborted                 /usr/bin/cmake -C/.../CIP-build/VTKv7-prefix/tmp/VTKv7-cache.cmake "-GUnix Makefiles" /.../CIP-build/VTKv7
[ 27%] Performing build step for 'VTKv7'

gmake[3]: *** No targets specified and no makefile found.  Stop.

[ 28%] No install step for 'VTKv7'
[ 29%] Completed 'VTKv7'
[ 29%] Built target VTKv7
Scanning dependencies of target teem
[ 30%] Creating directories for 'teem'
[ 32%] Performing download step (git clone) for 'teem'
Cloning into 'teem'...
Note: checking out 'e4746083c0e1dc0c137124c41eca5d23adf73bfa'.

You are in 'detached HEAD' state. You can look around, make experimental

[ 48%] Building C object CMakeFiles/teem.dir/src/mite/ray.c.o
[ 48%] Building C object CMakeFiles/teem.dir/src/mite/renderMite.c.o
[ 49%] Building C object CMakeFiles/teem.dir/src/mite/shade.c.o
[ 49%] Building C object CMakeFiles/teem.dir/src/mite/thread.c.o
[ 49%] Building C object CMakeFiles/teem.dir/src/mite/txf.c.o
[ 49%] Building C object CMakeFiles/teem.dir/src/mite/user.c.o
[ 50%] Building C object CMakeFiles/teem.dir/src/meet/enumall.c.o
[ 50%] Building C object CMakeFiles/teem.dir/src/meet/meetNrrd.c.o
[ 50%] Building C object CMakeFiles/teem.dir/src/meet/meetGage.c.o
[ 50%] Building C object CMakeFiles/teem.dir/src/meet/meetPull.c.o

gmake[5]: *** No rule to make target `/.../CIP-build/zlib-install/lib/libzlib.a', needed by `bin/libteem.so.1.12.0'.  Stop.

[ 94%] Built target teem
Scanning dependencies of target airSanity
[ 94%] Building C object src/bin/CMakeFiles/airSanity.dir/airSanity.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/airSanity'.  Stop.

[ 94%] Built target airSanity
Scanning dependencies of target cubic
[ 94%] Building C object src/bin/CMakeFiles/cubic.dir/cubic.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/cubic'.  Stop.

[ 94%] Built target cubic
Scanning dependencies of target deconv
[ 94%] Building C object src/bin/CMakeFiles/deconv.dir/deconv.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/deconv'.  Stop.

[ 94%] Built target deconv
Scanning dependencies of target emap
[ 95%] Building C object src/bin/CMakeFiles/emap.dir/emap.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/emap'.  Stop.

[ 95%] Built target emap
Scanning dependencies of target gkms
[ 95%] Building C object src/bin/CMakeFiles/gkms.dir/gkms.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/gkms'.  Stop.

[ 95%] Built target gkms
Scanning dependencies of target gprobe
[ 95%] Building C object src/bin/CMakeFiles/gprobe.dir/gprobe.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/gprobe'.  Stop.

[ 95%] Built target gprobe
Scanning dependencies of target ilk
[ 95%] Building C object src/bin/CMakeFiles/ilk.dir/ilk.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/ilk'.  Stop.

[ 95%] Built target ilk
Scanning dependencies of target miter
[ 96%] Building C object src/bin/CMakeFiles/miter.dir/miter.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/miter'.  Stop.

[ 96%] Built target miter
Scanning dependencies of target mrender
[ 96%] Building C object src/bin/CMakeFiles/mrender.dir/mrender.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/mrender'.  Stop.

[ 96%] Built target mrender
Scanning dependencies of target ninspect
[ 96%] Building C object src/bin/CMakeFiles/ninspect.dir/ninspect.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/ninspect'.  Stop.

[ 96%] Built target ninspect
Scanning dependencies of target nrrdSanity
[ 96%] Building C object src/bin/CMakeFiles/nrrdSanity.dir/nrrdSanity.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/nrrdSanity'.  Stop.

[ 96%] Built target nrrdSanity
Scanning dependencies of target overrgb
[ 97%] Building C object src/bin/CMakeFiles/overrgb.dir/overrgb.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/overrgb'.  Stop.

[ 97%] Built target overrgb
Scanning dependencies of target pprobe
[ 97%] Building C object src/bin/CMakeFiles/pprobe.dir/pprobe.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/pprobe'.  Stop.

[ 97%] Built target pprobe
Scanning dependencies of target puller
[ 97%] Building C object src/bin/CMakeFiles/puller.dir/puller.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/puller'.  Stop.

[ 97%] Built target puller
Scanning dependencies of target qbert
[ 97%] Building C object src/bin/CMakeFiles/qbert.dir/qbert.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/qbert'.  Stop.

[ 97%] Built target qbert
Scanning dependencies of target spots
[ 98%] Building C object src/bin/CMakeFiles/spots.dir/spots.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/spots'.  Stop.

[ 98%] Built target spots
Scanning dependencies of target talkweb
[ 98%] Building C object src/bin/CMakeFiles/talkweb.dir/talkweb.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/talkweb'.  Stop.

[ 98%] Built target talkweb
Scanning dependencies of target tend
[ 99%] Building C object src/bin/CMakeFiles/tend.dir/tend.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/tend'.  Stop.

[ 99%] Built target tend
Scanning dependencies of target ungantry
[ 99%] Building C object src/bin/CMakeFiles/ungantry.dir/ungantry.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/ungantry'.  Stop.

[ 99%] Built target ungantry
Scanning dependencies of target unu
[ 99%] Building C object src/bin/CMakeFiles/unu.dir/unu.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/unu'.  Stop.

[ 99%] Built target unu
Scanning dependencies of target vprobe
[100%] Building C object src/bin/CMakeFiles/vprobe.dir/vprobe.c.o

gmake[5]: *** No rule to make target `bin/libteem.so.1.12.0', needed by `bin/vprobe'.  Stop.

[100%] Built target vprobe
[ 38%] No install step for 'teem'
[ 39%] Completed 'teem'
[ 39%] Built target teem
Scanning dependencies of target CIPPython
[ 40%] Creating directories for 'CIPPython'
[ 43%] Performing download step (git clone) for 'CIPPython'
Cloning into 'CIPPython'...
Already on 'master'
Your branch is up-to-date with 'origin/master'.

[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/mathews/simpson.c.o
[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/mathews/trapezod.c.o
[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/mathews/adaquad.c.o
[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spAllocate.c.o
[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spBuild.c.o
[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spFactor.c.o
[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spSolve.c.o
[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spUtils.c.o
[ 30%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spOutput.c.o
Linking C shared library ../../../../../../../lib/libitkv3p_netlib-4.10.so

CMake Error: cmake_symlink_library: System Error: File exists

[ 30%] Built target itkv3p_netlib
Scanning dependencies of target itkvnl_algo
[ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_cholesky.cxx.o
[ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_ldl_cholesky.cxx.o
[ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_sparse_lu.cxx.o
[ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_real_eigensystem.cxx.o
[ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_complex_eigensystem.cxx.o
[ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_generalized_eigensystem.cxx.o
[ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_sparse_symmetric_eigensystem.cxx.o
[ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_generalized_schur.cxx.o

[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dgamma.c.o
[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dlbeta.c.o
[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dlgams.c.o
[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dlngam.c.o
[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dlnrel.c.o
[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/initds.c.o
[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/xermsg.c.o
[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d_int.c.o
[ 41%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d_mod.c.o
Linking C shared library ../../../../../../lib/libitkNetlibSlatec-4.10.so

CMake Error: cmake_symlink_library: System Error: File exists

[ 41%] Built target itkNetlibSlatec
Scanning dependencies of target ITKNetlib-all
[ 41%] Built target ITKNetlib-all
Scanning dependencies of target ITKStatistics
[ 41%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkProbabilityDistribution.cxx.o
[ 41%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkDenseFrequencyContainer2.cxx.o
[ 41%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkSparseFrequencyContainer2.cxx.o
[ 41%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkChiSquareDistribution.cxx.o
[ 41%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkGaussianDistribution.cxx.o
[ 41%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkTDistribution.cxx.o

[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaOutput.cxx.o
[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaScene.cxx.o
[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaSurface.cxx.o
[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaTube.cxx.o
[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaVesselTube.cxx.o
[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaTransform.cxx.o
[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaTubeGraph.cxx.o
[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaForm.cxx.o
[ 43%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaArray.cxx.o
[ 44%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaFEMObject.cxx.o

gmake[5]: *** No rule to make target `/.../CIP-build/zlib-install/lib/libzlib.a', needed by `lib/libITKMetaIO-4.10.so.1'.  Stop.

[ 44%] Built target ITKMetaIO
[ 44%] Built target ITKMetaIO-all
Scanning dependencies of target ITKSpatialObjects
[ 44%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkMetaEvent.cxx.o
[ 44%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkCylinderSpatialObject.cxx.o
[ 44%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkSpatialObjectFactoryBase.cxx.o
[ 44%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkArrowSpatialObject.cxx.o
Linking CXX shared library ../../../../lib/libITKSpatialObjects-4.10.so
[ 44%] Built target ITKSpatialObjects
[ 44%] Built target ITKSpatialObjects-all

[ 44%] Built target ITKThresholding-all
[ 44%] Built target ITKConnectedComponents-all
[ 44%] Built target ITKMathematicalMorphology-all
[ 44%] Built target ITKBinaryMathematicalMorphology-all
[ 44%] Built target ITKImageLabel-all
[ 44%] Built target ITKNarrowBand-all
[ 44%] Built target ITKDistanceMap-all
Scanning dependencies of target ITKQuadEdgeMesh
[ 44%] Building CXX object Modules/Core/QuadEdgeMesh/src/CMakeFiles/ITKQuadEdgeMesh.dir/itkQuadEdge.cxx.o
Linking CXX shared library ../../../../lib/libITKQuadEdgeMesh-4.10.so

CMake Error: cmake_symlink_library: System Error: File exists

[ 44%] Built target ITKQuadEdgeMesh
[ 44%] Built target ITKQuadEdgeMesh-all
Scanning dependencies of target ITKFastMarching-all
[ 44%] Built target ITKFastMarching-all
Scanning dependencies of target ITKIOImageBase
[ 44%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageSeriesWriter.cxx.o
[ 44%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageFileReaderException.cxx.o
[ 44%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageFileWriter.cxx.o
[ 44%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkArchetypeSeriesFileNames.cxx.o
[ 44%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageIOFactory.cxx.o

Scanning dependencies of target ITKPolynomials
[ 47%] Building CXX object Modules/Numerics/Polynomials/src/CMakeFiles/ITKPolynomials.dir/itkMultivariateLegendrePolynomial.cxx.o
Linking CXX shared library ../../../../lib/libITKPolynomials-4.10.so
[ 47%] Built target ITKPolynomials
Scanning dependencies of target ITKPolynomials-all
[ 47%] Built target ITKPolynomials-all
Scanning dependencies of target ITKBiasCorrection
[ 47%] Building CXX object Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/itkCompositeValleyFunction.cxx.o
[ 47%] Building CXX object Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/itkCacheableScalarFunction.cxx.o
Linking CXX shared library ../../../../lib/libITKBiasCorrection-4.10.so

CMake Error: cmake_symlink_library: System Error: File exists

[ 47%] Built target ITKBiasCorrection
Scanning dependencies of target ITKBiasCorrection-all
[ 47%] Built target ITKBiasCorrection-all
Scanning dependencies of target ITKBioCell
[ 47%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioGenome.cxx.o
[ 47%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioGene.cxx.o
[ 47%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioGeneNetwork.cxx.o
[ 47%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioCellBase.cxx.o
[ 47%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioCellularAggregateBase.cxx.o
Linking CXX shared library ../../../../lib/libITKBioCell-4.10.so
The maximum number of reported warnings or errors has been reached!!!