...found 21657 targets...
...updating 10642 targets...
common.mkdir /.../CIP-build/Boost-install
common.mkdir /.../CIP-build/Boost-install/lib
common.mkdir bin.v2/libs/system
common.mkdir bin.v2/libs/system/build
common.mkdir bin.v2/libs/system/build/darwin-4.2.1
common.mkdir bin.v2/libs/system/build/darwin-4.2.1/release
common.mkdir bin.v2/libs/system/build/darwin-4.2.1/release/threading-multi
darwin.compile.c++ bin.v2/libs/system/build/darwin-4.2.1/release/threading-multi/error_code.o

clang: warning: optimization flag '-finline-functions' is not supported

darwin.link.dll bin.v2/libs/system/build/darwin-4.2.1/release/threading-multi/libboost_system.dylib
common.copy /.../CIP-build/Boost-install/lib/libboost_system.dylib
common.mkdir bin.v2/libs/thread
common.mkdir bin.v2/libs/thread/build
common.mkdir bin.v2/libs/thread/build/darwin-4.2.1
common.mkdir bin.v2/libs/thread/build/darwin-4.2.1/release
common.mkdir bin.v2/libs/thread/build/darwin-4.2.1/release/threading-multi
common.mkdir bin.v2/libs/thread/build/darwin-4.2.1/release/threading-multi/pthread
darwin.compile.c++ bin.v2/libs/thread/build/darwin-4.2.1/release/threading-multi/pthread/thread.o

clang: warning: optimization flag '-finline-functions' is not supported

In file included from libs/thread/src/pthread/thread.cpp:11:
In file included from ./boost/thread/thread_only.hpp:17:
In file included from ./boost/thread/pthread/thread_data.hpp:18:
In file included from ./boost/optional.hpp:15:

./boost/optional/optional.hpp:355:8: warning: unused typedef 'boost_static_assert_typedef_355' [-Wunused-local-typedef]

       BOOST_STATIC_ASSERT ( ::boost::mpl::not_<is_reference_predicate>::value ) ;
       ^

./boost/static_assert.hpp:170:16: note: expanded from macro 'BOOST_STATIC_ASSERT'

               BOOST_JOIN(boost_static_assert_typedef_, __LINE__) BOOST_STATIC_ASSERT_UNUSED_ATTRIBUTE
               ^

./boost/config/suffix.hpp:608:28: note: expanded from macro 'BOOST_JOIN'

#define BOOST_JOIN( X, Y ) BOOST_DO_JOIN( X, Y )
                           ^

./boost/config/suffix.hpp:609:31: note: expanded from macro 'BOOST_DO_JOIN'

#define BOOST_DO_JOIN( X, Y ) BOOST_DO_JOIN2(X,Y)
                              ^

./boost/config/suffix.hpp:610:32: note: expanded from macro 'BOOST_DO_JOIN2'

#define BOOST_DO_JOIN2( X, Y ) X##Y
                               ^

<scratch space>:28:1: note: expanded from here

boost_static_assert_typedef_355
^
In file included from libs/thread/src/pthread/thread.cpp:11:
In file included from ./boost/thread/thread_only.hpp:17:
In file included from ./boost/thread/pthread/thread_data.hpp:18:
In file included from ./boost/optional.hpp:15:

./boost/optional/optional.hpp:364:8: warning: unused typedef 'boost_static_assert_typedef_364' [-Wunused-local-typedef]

       BOOST_STATIC_ASSERT ( ::boost::mpl::not_<is_reference_predicate>::value ) ;
       ^

./boost/static_assert.hpp:170:16: note: expanded from macro 'BOOST_STATIC_ASSERT'

               BOOST_JOIN(boost_static_assert_typedef_, __LINE__) BOOST_STATIC_ASSERT_UNUSED_ATTRIBUTE
               ^

./boost/config/suffix.hpp:608:28: note: expanded from macro 'BOOST_JOIN'

#define BOOST_JOIN( X, Y ) BOOST_DO_JOIN( X, Y )
                           ^

./boost/config/suffix.hpp:609:31: note: expanded from macro 'BOOST_DO_JOIN'

#define BOOST_DO_JOIN( X, Y ) BOOST_DO_JOIN2(X,Y)
                              ^

./boost/config/suffix.hpp:610:32: note: expanded from macro 'BOOST_DO_JOIN2'

#define BOOST_DO_JOIN2( X, Y ) X##Y
                               ^

<scratch space>:30:1: note: expanded from here

boost_static_assert_typedef_364
^
In file included from libs/thread/src/pthread/thread.cpp:11:
In file included from ./boost/thread/thread_only.hpp:22:
In file included from ./boost/thread/detail/thread.hpp:29:
In file included from ./boost/bind.hpp:22:
In file included from ./boost/bind/bind.hpp:29:

./boost/bind/arg.hpp:37:22: warning: unused typedef 'T_must_be_placeholder' [-Wunused-local-typedef]

        typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
                     ^
In file included from libs/thread/src/pthread/thread.cpp:19:
In file included from ./boost/thread/future.hpp:22:
In file included from ./boost/thread/detail/async_func.hpp:37:
In file included from ./boost/tuple/tuple.hpp:33:

./boost/tuple/detail/tuple_basic.hpp:228:45: warning: unused typedef 'cons_element' [-Wunused-local-typedef]

  typedef BOOST_DEDUCED_TYPENAME impl::type cons_element;
                                            ^

./boost/tuple/detail/tuple_basic.hpp:325:5: warning: unused typedef 'boost_static_assert_typedef_325' [-Wunused-local-typedef]

    BOOST_STATIC_ASSERT(length<cons>::value == 2); // check length = 2
    ^

./boost/static_assert.hpp:170:16: note: expanded from macro 'BOOST_STATIC_ASSERT'

               BOOST_JOIN(boost_static_assert_typedef_, __LINE__) BOOST_STATIC_ASSERT_UNUSED_ATTRIBUTE
               ^

./boost/config/suffix.hpp:608:28: note: expanded from macro 'BOOST_JOIN'

#define BOOST_JOIN( X, Y ) BOOST_DO_JOIN( X, Y )
                           ^

./boost/config/suffix.hpp:609:31: note: expanded from macro 'BOOST_DO_JOIN'

#define BOOST_DO_JOIN( X, Y ) BOOST_DO_JOIN2(X,Y)
                              ^

./boost/config/suffix.hpp:610:32: note: expanded from macro 'BOOST_DO_JOIN2'

#define BOOST_DO_JOIN2( X, Y ) X##Y
                               ^

<scratch space>:45:1: note: expanded from here

boost_static_assert_typedef_325
^
In file included from libs/thread/src/pthread/thread.cpp:19:
In file included from ./boost/thread/future.hpp:22:
In file included from ./boost/thread/detail/async_func.hpp:37:
In file included from ./boost/tuple/tuple.hpp:33:

./boost/tuple/detail/tuple_basic.hpp:582:5: warning: unused typedef 'boost_static_assert_typedef_582' [-Wunused-local-typedef]

    BOOST_STATIC_ASSERT(length<tuple>::value == 2);// check_length = 2
    ^

./boost/static_assert.hpp:170:16: note: expanded from macro 'BOOST_STATIC_ASSERT'

               BOOST_JOIN(boost_static_assert_typedef_, __LINE__) BOOST_STATIC_ASSERT_UNUSED_ATTRIBUTE
               ^

./boost/config/suffix.hpp:608:28: note: expanded from macro 'BOOST_JOIN'

#define BOOST_JOIN( X, Y ) BOOST_DO_JOIN( X, Y )
                           ^

./boost/config/suffix.hpp:609:31: note: expanded from macro 'BOOST_DO_JOIN'

#define BOOST_DO_JOIN( X, Y ) BOOST_DO_JOIN2(X,Y)
                              ^

./boost/config/suffix.hpp:610:32: note: expanded from macro 'BOOST_DO_JOIN2'

#define BOOST_DO_JOIN2( X, Y ) X##Y
                               ^

<scratch space>:47:1: note: expanded from here

boost_static_assert_typedef_582
^
6 warnings generated.
darwin.compile.c++ bin.v2/libs/thread/build/darwin-4.2.1/release/threading-multi/pthread/once.o

clang: warning: optimization flag '-finline-functions' is not supported

In file included from libs/thread/src/pthread/once.cpp:8:
In file included from libs/thread/src/pthread/./once_atomic.cpp:9:
In file included from ./boost/thread/once.hpp:20:
In file included from ./boost/thread/pthread/once_atomic.hpp:19:
In file included from ./boost/bind.hpp:22:
In file included from ./boost/bind/bind.hpp:29:

./boost/bind/arg.hpp:37:22: warning: unused typedef 'T_must_be_placeholder' [-Wunused-local-typedef]

        typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
                     ^
1 warning generated.
darwin.compile.c++ bin.v2/libs/thread/build/darwin-4.2.1/release/threading-multi/future.o

clang: warning: optimization flag '-finline-functions' is not supported

darwin.link.dll bin.v2/libs/thread/build/darwin-4.2.1/release/threading-multi/libboost_thread.dylib
common.copy /.../CIP-build/Boost-install/lib/libboost_thread.dylib
common.mkdir bin.v2/libs/context/build
common.mkdir bin.v2/libs/context/build/darwin-4.2.1
common.mkdir bin.v2/libs/context/build/darwin-4.2.1/release
common.mkdir bin.v2/libs/context/build/darwin-4.2.1/release/link-static
common.mkdir bin.v2/libs/context/build/darwin-4.2.1/release/link-static/threading-multi
common.mkdir bin.v2/libs/context/build/darwin-4.2.1/release/link-static/threading-multi/asm
darwin.compile.asm bin.v2/libs/context/build/darwin-4.2.1/release/link-static/threading-multi/asm/make_x86_64_sysv_macho_gas.o

clang: warning: optimization flag '-finline-functions' is not supported

darwin.compile.asm bin.v2/libs/context/build/darwin-4.2.1/release/link-static/threading-multi/asm/jump_x86_64_sysv_macho_gas.o

clang: warning: optimization flag '-finline-functions' is not supported

darwin.archive bin.v2/libs/context/build/darwin-4.2.1/release/link-static/threading-multi/libboost_context.a
common.copy /.../CIP-build/Boost-install/lib/libboost_context.a
common.mkdir bin.v2/libs/coroutine
common.mkdir bin.v2/libs/coroutine/build
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1/release
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi
common.mkdir bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi/detail
darwin.compile.c++ bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi/detail/standard_stack_allocator_posix.o

libs/coroutine/src/detail/standard_stack_allocator_posix.cpp:61:15: warning: unused variable 'result' [-Wunused-variable]

    const int result = ::getrlimit( RLIMIT_STACK, & limit);
              ^

libs/coroutine/src/detail/standard_stack_allocator_posix.cpp:135:15: warning: unused variable 'result' [-Wunused-variable]

    const int result( ::mprotect( limit, detail::pagesize(), PROT_NONE) );
              ^
2 warnings generated.
darwin.compile.c++ bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi/detail/coroutine_context.o

clang: warning: optimization flag '-finline-functions' is not supported

darwin.archive bin.v2/libs/coroutine/build/darwin-4.2.1/release/link-static/threading-multi/libboost_coroutine.a
common.copy /.../CIP-build/Boost-install/lib/libboost_coroutine.a
common.mkdir /.../CIP-build/Boost-install/include
common.mkdir /.../CIP-build/Boost-install/include/boost
common.copy /.../CIP-build/Boost-install/include/boost/aligned_storage.hpp
common.copy /.../CIP-build/Boost-install/include/boost/any.hpp
common.copy /.../CIP-build/Boost-install/include/boost/array.hpp
common.copy /.../CIP-build/Boost-install/include/boost/asio.hpp
common.copy /.../CIP-build/Boost-install/include/boost/assert.hpp
common.copy /.../CIP-build/Boost-install/include/boost/assign.hpp

common.copy /.../CIP-build/Boost-install/include/boost/tr1/tr1/type_traits
common.copy /.../CIP-build/Boost-install/include/boost/tr1/tr1/typeinfo
common.copy /.../CIP-build/Boost-install/include/boost/tr1/tr1/unordered_map
common.copy /.../CIP-build/Boost-install/include/boost/tr1/tr1/unordered_set
common.copy /.../CIP-build/Boost-install/include/boost/tr1/tr1/utility
common.copy /.../CIP-build/Boost-install/include/boost/tr1/tr1/valarray
common.copy /.../CIP-build/Boost-install/include/boost/tr1/tr1/vector
common.mkdir bin.v2/libs/system/build/darwin-4.2.1/release/link-static
common.mkdir bin.v2/libs/system/build/darwin-4.2.1/release/link-static/threading-multi
darwin.compile.c++ bin.v2/libs/system/build/darwin-4.2.1/release/link-static/threading-multi/error_code.o

clang: warning: optimization flag '-finline-functions' is not supported

darwin.archive bin.v2/libs/system/build/darwin-4.2.1/release/link-static/threading-multi/libboost_system.a
common.copy /.../CIP-build/Boost-install/lib/libboost_system.a
common.mkdir bin.v2/libs/thread/build/darwin-4.2.1/release/link-static
common.mkdir bin.v2/libs/thread/build/darwin-4.2.1/release/link-static/threading-multi
common.mkdir bin.v2/libs/thread/build/darwin-4.2.1/release/link-static/threading-multi/pthread
darwin.compile.c++ bin.v2/libs/thread/build/darwin-4.2.1/release/link-static/threading-multi/pthread/thread.o

clang: warning: optimization flag '-finline-functions' is not supported

In file included from libs/thread/src/pthread/thread.cpp:11:
In file included from ./boost/thread/thread_only.hpp:17:
In file included from ./boost/thread/pthread/thread_data.hpp:18:
In file included from ./boost/optional.hpp:15:

./boost/optional/optional.hpp:355:8: warning: unused typedef 'boost_static_assert_typedef_355' [-Wunused-local-typedef]

       BOOST_STATIC_ASSERT ( ::boost::mpl::not_<is_reference_predicate>::value ) ;
       ^

./boost/static_assert.hpp:170:16: note: expanded from macro 'BOOST_STATIC_ASSERT'

               BOOST_JOIN(boost_static_assert_typedef_, __LINE__) BOOST_STATIC_ASSERT_UNUSED_ATTRIBUTE
               ^

./boost/config/suffix.hpp:608:28: note: expanded from macro 'BOOST_JOIN'

#define BOOST_JOIN( X, Y ) BOOST_DO_JOIN( X, Y )
                           ^

./boost/config/suffix.hpp:609:31: note: expanded from macro 'BOOST_DO_JOIN'

#define BOOST_DO_JOIN( X, Y ) BOOST_DO_JOIN2(X,Y)
                              ^

./boost/config/suffix.hpp:610:32: note: expanded from macro 'BOOST_DO_JOIN2'

#define BOOST_DO_JOIN2( X, Y ) X##Y
                               ^

<scratch space>:28:1: note: expanded from here

boost_static_assert_typedef_355
^
In file included from libs/thread/src/pthread/thread.cpp:11:
In file included from ./boost/thread/thread_only.hpp:17:
In file included from ./boost/thread/pthread/thread_data.hpp:18:
In file included from ./boost/optional.hpp:15:

./boost/optional/optional.hpp:364:8: warning: unused typedef 'boost_static_assert_typedef_364' [-Wunused-local-typedef]

       BOOST_STATIC_ASSERT ( ::boost::mpl::not_<is_reference_predicate>::value ) ;
       ^

./boost/static_assert.hpp:170:16: note: expanded from macro 'BOOST_STATIC_ASSERT'

               BOOST_JOIN(boost_static_assert_typedef_, __LINE__) BOOST_STATIC_ASSERT_UNUSED_ATTRIBUTE
               ^

./boost/config/suffix.hpp:608:28: note: expanded from macro 'BOOST_JOIN'

#define BOOST_JOIN( X, Y ) BOOST_DO_JOIN( X, Y )
                           ^

./boost/config/suffix.hpp:609:31: note: expanded from macro 'BOOST_DO_JOIN'

#define BOOST_DO_JOIN( X, Y ) BOOST_DO_JOIN2(X,Y)
                              ^

./boost/config/suffix.hpp:610:32: note: expanded from macro 'BOOST_DO_JOIN2'

#define BOOST_DO_JOIN2( X, Y ) X##Y
                               ^

<scratch space>:30:1: note: expanded from here

boost_static_assert_typedef_364
^
In file included from libs/thread/src/pthread/thread.cpp:11:
In file included from ./boost/thread/thread_only.hpp:22:
In file included from ./boost/thread/detail/thread.hpp:29:
In file included from ./boost/bind.hpp:22:
In file included from ./boost/bind/bind.hpp:29:

./boost/bind/arg.hpp:37:22: warning: unused typedef 'T_must_be_placeholder' [-Wunused-local-typedef]

        typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
                     ^
In file included from libs/thread/src/pthread/thread.cpp:19:
In file included from ./boost/thread/future.hpp:22:
In file included from ./boost/thread/detail/async_func.hpp:37:
In file included from ./boost/tuple/tuple.hpp:33:

./boost/tuple/detail/tuple_basic.hpp:228:45: warning: unused typedef 'cons_element' [-Wunused-local-typedef]

  typedef BOOST_DEDUCED_TYPENAME impl::type cons_element;
                                            ^

./boost/tuple/detail/tuple_basic.hpp:325:5: warning: unused typedef 'boost_static_assert_typedef_325' [-Wunused-local-typedef]

    BOOST_STATIC_ASSERT(length<cons>::value == 2); // check length = 2
    ^

./boost/static_assert.hpp:170:16: note: expanded from macro 'BOOST_STATIC_ASSERT'

               BOOST_JOIN(boost_static_assert_typedef_, __LINE__) BOOST_STATIC_ASSERT_UNUSED_ATTRIBUTE
               ^

./boost/config/suffix.hpp:608:28: note: expanded from macro 'BOOST_JOIN'

#define BOOST_JOIN( X, Y ) BOOST_DO_JOIN( X, Y )
                           ^

./boost/config/suffix.hpp:609:31: note: expanded from macro 'BOOST_DO_JOIN'

#define BOOST_DO_JOIN( X, Y ) BOOST_DO_JOIN2(X,Y)
                              ^

./boost/config/suffix.hpp:610:32: note: expanded from macro 'BOOST_DO_JOIN2'

#define BOOST_DO_JOIN2( X, Y ) X##Y
                               ^

<scratch space>:45:1: note: expanded from here

boost_static_assert_typedef_325
^
In file included from libs/thread/src/pthread/thread.cpp:19:
In file included from ./boost/thread/future.hpp:22:
In file included from ./boost/thread/detail/async_func.hpp:37:
In file included from ./boost/tuple/tuple.hpp:33:

./boost/tuple/detail/tuple_basic.hpp:582:5: warning: unused typedef 'boost_static_assert_typedef_582' [-Wunused-local-typedef]

    BOOST_STATIC_ASSERT(length<tuple>::value == 2);// check_length = 2
    ^

./boost/static_assert.hpp:170:16: note: expanded from macro 'BOOST_STATIC_ASSERT'

               BOOST_JOIN(boost_static_assert_typedef_, __LINE__) BOOST_STATIC_ASSERT_UNUSED_ATTRIBUTE
               ^

./boost/config/suffix.hpp:608:28: note: expanded from macro 'BOOST_JOIN'

#define BOOST_JOIN( X, Y ) BOOST_DO_JOIN( X, Y )
                           ^

./boost/config/suffix.hpp:609:31: note: expanded from macro 'BOOST_DO_JOIN'

#define BOOST_DO_JOIN( X, Y ) BOOST_DO_JOIN2(X,Y)
                              ^

./boost/config/suffix.hpp:610:32: note: expanded from macro 'BOOST_DO_JOIN2'

#define BOOST_DO_JOIN2( X, Y ) X##Y
                               ^

<scratch space>:47:1: note: expanded from here

boost_static_assert_typedef_582
^
6 warnings generated.
darwin.compile.c++ bin.v2/libs/thread/build/darwin-4.2.1/release/link-static/threading-multi/pthread/once.o

clang: warning: optimization flag '-finline-functions' is not supported

In file included from libs/thread/src/pthread/once.cpp:8:
In file included from libs/thread/src/pthread/./once_atomic.cpp:9:
In file included from ./boost/thread/once.hpp:20:
In file included from ./boost/thread/pthread/once_atomic.hpp:19:
In file included from ./boost/bind.hpp:22:
In file included from ./boost/bind/bind.hpp:29:

./boost/bind/arg.hpp:37:22: warning: unused typedef 'T_must_be_placeholder' [-Wunused-local-typedef]

        typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
                     ^
1 warning generated.
darwin.compile.c++ bin.v2/libs/thread/build/darwin-4.2.1/release/link-static/threading-multi/future.o

clang: warning: optimization flag '-finline-functions' is not supported

darwin.archive bin.v2/libs/thread/build/darwin-4.2.1/release/link-static/threading-multi/libboost_thread.a
common.copy /.../CIP-build/Boost-install/lib/libboost_thread.a
...updated 10642 targets...
[  7%] Performing build step for 'Boost'
Usage

  cmake [options] <path-to-source>
  cmake [options] <path-to-existing-build>

Specify a source directory to (re-)generate a build system for it in the

-- Detecting CXX compile features - done
-- Setting build type to 'Debug' as none was specified.
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Configuring done
-- Generating done

CMake Warning (dev):

  Policy CMP0042 is not set: MACOSX_RPATH is enabled by default.  Run "cmake
  --help-policy CMP0042" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

  MACOSX_RPATH is not specified for the following targets:

   ModuleDescriptionParser

This warning is for project developers.  Use -Wno-dev to suppress it.

-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found X11: /opt/X11/lib/libX11.dylib
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Check the value of the 22nd bit of a 32-bit quiet-NaN
-- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1
-- Found ZLIB: /.../CIP-build/zlib-install/lib/libzlib.a (found version "1.2.3") 

CMake Warning (dev) at CMakeLists.txt:555 (install):

  Policy CMP0062 is not set: Disallow install() of export() result.  Run
  "cmake --help-policy CMP0062" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.

  The file

    /.../CIP-build/teem-build/TeemLibraryDepends.cmake

  was generated by the export() command.  It should not be installed with the
  install() command.  Use the install(EXPORT) mechanism instead.  See the

  cmake-packages(7) manual for more.

This warning is for project developers.  Use -Wno-dev to suppress it.
-- Configuring done

-- Generating done

CMake Warning (dev):

  Policy CMP0042 is not set: MACOSX_RPATH is enabled by default.  Run "cmake
  --help-policy CMP0042" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

  MACOSX_RPATH is not specified for the following targets:

   teem

This warning is for project developers.  Use -Wno-dev to suppress it.

[ 10%] Building C object CMakeFiles/teem.dir/src/nrrd/formatNRRD.c.o
[ 11%] Building C object CMakeFiles/teem.dir/src/nrrd/formatPNG.c.o
[ 11%] Building C object CMakeFiles/teem.dir/src/nrrd/formatPNM.c.o
[ 11%] Building C object CMakeFiles/teem.dir/src/nrrd/formatText.c.o
[ 11%] Building C object CMakeFiles/teem.dir/src/nrrd/formatVTK.c.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/gzio.c.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/hestNrrd.c.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/histogram.c.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/iter.c.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/kernel.c.o

/.../CIP-build/teem/src/nrrd/kernel.c:3264:25: warning: address of array 'kernA->name' will always evaluate to 'true' [-Wpointer-bool-conversion]

             me, kernA->name ? kernA->name : "(unnamed)", pnum);
                 ~~~~~~~^~~~ ~

/.../CIP-build/teem/src/nrrd/kernel.c:3385:15: warning: address of array 'kern->name' will always evaluate to 'true' [-Wpointer-bool-conversion]

  if (!(kern->name && kern->support && kern->integral
        ~~~~~~^~~~ ~~

/.../CIP-build/teem/src/nrrd/kernel.c:3389:23: warning: address of array 'kern->name' will always evaluate to 'true' [-Wpointer-bool-conversion]

             !!(kern->name), !!(kern->support), !!(kern->integral),
              ~ ~~~~~~^~~~
3 warnings generated.
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/keyvalue.c.o
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/map.c.o
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/measure.c.o
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/methodsNrrd.c.o
[ 14%] Building C object CMakeFiles/teem.dir/src/nrrd/parseNrrd.c.o
[ 14%] Building C object CMakeFiles/teem.dir/src/nrrd/range.c.o
[ 14%] Building C object CMakeFiles/teem.dir/src/nrrd/read.c.o

[ 41%] Building C object CMakeFiles/teem.dir/src/gage/print.c.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/pvl.c.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/scl.c.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/sclanswer.c.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/sclfilter.c.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/sclprint.c.o
[ 43%] Building C object CMakeFiles/teem.dir/src/gage/shape.c.o
[ 43%] Building C object CMakeFiles/teem.dir/src/gage/st.c.o
[ 43%] Building C object CMakeFiles/teem.dir/src/gage/stack.c.o
[ 43%] Building C object CMakeFiles/teem.dir/src/gage/stackBlur.c.o

/.../CIP-build/teem/src/gage/stackBlur.c:505:7: warning: logical not is only applied to the left hand side of this comparison [-Wlogical-not-parentheses]

  if (!dgGoodSigmaMax > 0) {
      ^               ~

/.../CIP-build/teem/src/gage/stackBlur.c:505:7: note: add parentheses after the '!' to evaluate the comparison first

  if (!dgGoodSigmaMax > 0) {
      ^
       (                 )

/.../CIP-build/teem/src/gage/stackBlur.c:505:7: note: add parentheses around left hand side expression to silence this warning

  if (!dgGoodSigmaMax > 0) {
      ^
      (              )
1 warning generated.
[ 44%] Building C object CMakeFiles/teem.dir/src/gage/update.c.o
[ 44%] Building C object CMakeFiles/teem.dir/src/gage/vecGage.c.o
[ 44%] Building C object CMakeFiles/teem.dir/src/gage/vecprint.c.o
[ 44%] Building C object CMakeFiles/teem.dir/src/gage/optimsig.c.o
[ 45%] Building C object CMakeFiles/teem.dir/src/dye/convertDye.c.o
[ 45%] Building C object CMakeFiles/teem.dir/src/dye/methodsDye.c.o

[ 87%] Building C object CMakeFiles/teem.dir/src/mite/defaultsMite.c.o
[ 87%] Building C object CMakeFiles/teem.dir/src/mite/kindnot.c.o
[ 87%] Building C object CMakeFiles/teem.dir/src/mite/ray.c.o
[ 87%] Building C object CMakeFiles/teem.dir/src/mite/renderMite.c.o
[ 88%] Building C object CMakeFiles/teem.dir/src/mite/shade.c.o
[ 88%] Building C object CMakeFiles/teem.dir/src/mite/thread.c.o
[ 88%] Building C object CMakeFiles/teem.dir/src/mite/txf.c.o
[ 88%] Building C object CMakeFiles/teem.dir/src/mite/user.c.o
[ 89%] Building C object CMakeFiles/teem.dir/src/meet/enumall.c.o
[ 89%] Building C object CMakeFiles/teem.dir/src/meet/meetNrrd.c.o

/.../CIP-build/teem/src/meet/meetNrrd.c:390:21: warning: address of array 'kk->name' will always evaluate to 'true' [-Wpointer-bool-conversion]

                kk->name ? kk->name : "(NULL name)");
                ~~~~^~~~ ~
1 warning generated.
[ 89%] Building C object CMakeFiles/teem.dir/src/meet/meetGage.c.o
[ 89%] Building C object CMakeFiles/teem.dir/src/meet/meetPull.c.o
[ 90%] Linking C shared library bin/libteem.dylib
[ 90%] Built target teem
Scanning dependencies of target airSanity
[ 90%] Building C object src/bin/CMakeFiles/airSanity.dir/airSanity.c.o
[ 90%] Linking C executable ../../bin/airSanity

[  1%] Building CXX object Utilities/CMakeFiles/CIPUtilities.dir/VTK/vtkNRRDWriterCIP.cxx.o
[  2%] Building CXX object Utilities/CMakeFiles/CIPUtilities.dir/ITK/itkFactoryRegistration.cxx.o
[  2%] Linking CXX static library /.../CIP-build/lib/libCIPUtilities.a
[  2%] Built target CIPUtilities
Scanning dependencies of target CIPCommon
[  2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipThinPlateSplineSurface.cxx.o
[  2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipLobeSurfaceModel.cxx.o
[  2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestRegionChestTypeLocations.cxx.o
[  2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipSphereStencil.cxx.o
[  2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipCylinderStencil.cxx.o

/.../CIP/Common/cipCylinderStencil.cxx:306:8: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]

  if ( abs( arg ) > 1.0 )
       ^

/.../CIP/Common/cipCylinderStencil.cxx:306:8: note: use function 'std::abs' instead

  if ( abs( arg ) > 1.0 )
       ^~~
       std::abs
1 warning generated.
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestDataViewer.cxx.o
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/itkCIPMergeChestLabelMapsImageFilter.cxx.o
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipParticleConnectedComponentFilter.cxx.o
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipVesselParticleConnectedComponentFilter.cxx.o
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipAirwayParticleConnectedComponentFilter.cxx.o
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipFissureParticleConnectedComponentFilter.cxx.o

[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageReformatAlongRay2.cxx.o
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkComputeAirwayWallPolyData.cxx.o
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageResliceWithPlane.cxx.o
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkComputeCentroid.cxx.o
[  6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageTubularConfidence.cxx.o
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkComputeMonogenicSignal.cxx.o
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkLungIntensityCorrection.cxx.o
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkEllipseFitting.cxx.o
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkMaskBoundingBox.cxx.o
[  7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkExtractAirwayTree.cxx.o

/.../CIP/Common/vtkExtractAirwayTree.cxx:869:3: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'? [-Wmismatched-new-delete]

  delete strength;
  ^
        []

/.../CIP/Common/vtkExtractAirwayTree.cxx:797:22: note: allocated with 'new[]' here

  double *strength = new double[numElem];
                     ^
1 warning generated.
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkMultipleReconstructionKernelsPhaseCongruency.cxx.o
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkGeneralizedPhaseCongruency.cxx.o
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkNRRDExport.cxx.o
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkGeneralizedQuadratureKernelSource.cxx.o
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkSmoothLines.cxx.o
[  8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageKernel.cxx.o
[  9%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkTubularScalePolyDataFilter.cxx.o

[  9%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageKernelSource.cxx.o
[  9%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkTubularScaleSelection.cxx.o

/.../CIP/Common/vtkTubularScaleSelection.cxx:361:3: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'? [-Wmismatched-new-delete]

  delete strength;
  ^
        []

/.../CIP/Common/vtkTubularScaleSelection.cxx:318:22: note: allocated with 'new[]' here

  double *strength = new double[numElem];
                     ^

/.../CIP/Common/vtkTubularScaleSelection.cxx:459:3: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'? [-Wmismatched-new-delete]

  delete strength;
  ^
        []

/.../CIP/Common/vtkTubularScaleSelection.cxx:395:22: note: allocated with 'new[]' here

  double *strength = new double[numElem];
                     ^
2 warnings generated.
[  9%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageReformatAlongRay.cxx.o
[  9%] Linking CXX static library /.../CIP-build/lib/libCIPCommon.a
[  9%] Built target CIPCommon
Scanning dependencies of target ChestConventions
[  9%] Building CXX object Common/CMakeFiles/ChestConventions.dir/cipChestConventions.cxx.o
[  9%] Linking CXX static library /.../CIP-build/lib/libChestConventions.a
[  9%] Built target ChestConventions

cythoning /.../CIP/cip_python/wrap_ChestConventions.pyx to /.../CIP/cip_python/wrap_ChestConventions.cpp
building 'ChestConventions' extension
creating build
creating build/temp.macosx-10.5-x86_64-2.7
creating build/temp.macosx-10.5-x86_64-2.7/Users
creating build/temp.macosx-10.5-x86_64-2.7/Users/jonieva
creating build/temp.macosx-10.5-x86_64-2.7/Users/jonieva/Projects
creating build/temp.macosx-10.5-x86_64-2.7/.../CIP
creating build/temp.macosx-10.5-x86_64-2.7/.../CIP/cip_python
/usr/bin/cc -fno-strict-aliasing -I/.../CIP-build/CIPPython-install/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/.../CIP/Common/ -I/.../CIP-build/CIPPython-install/include/python2.7 -c /.../CIP/cip_python/wrap_ChestConventions.cpp -o build/temp.macosx-10.5-x86_64-2.7/.../CIP/cip_python/wrap_ChestConventions.o

/.../CIP/cip_python/wrap_ChestConventions.cpp:5344:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function]

static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
                           ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:5341:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function]

static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) {
                               ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:341:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function]

static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
                            ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:5456:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function]

static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
                                ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:5518:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function]

static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
                                ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:4902:32: warning: unused function '__Pyx_PyInt_From_long' [-Wunused-function]

static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
                               ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:4928:27: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]

static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
                          ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:5112:26: warning: function '__Pyx_PyInt_As_int' is not needed and will not be emitted [-Wunneeded-internal-declaration]

static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) {
                         ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:3356:32: warning: unused function '__pyx_convert_PyObject_string_to_py_std__in_string' [-Wunused-function]

static CYTHON_INLINE PyObject *__pyx_convert_PyObject_string_to_py_std__in_string(std::string const &__pyx_v_s) {
                               ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:3406:32: warning: unused function '__pyx_convert_PyUnicode_string_to_py_std__in_string' [-Wunused-function]

static CYTHON_INLINE PyObject *__pyx_convert_PyUnicode_string_to_py_std__in_string(std::string const &__pyx_v_s) {
                               ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:3456:32: warning: unused function '__pyx_convert_PyStr_string_to_py_std__in_string' [-Wunused-function]

static CYTHON_INLINE PyObject *__pyx_convert_PyStr_string_to_py_std__in_string(std::string const &__pyx_v_s) {
                               ^

/.../CIP/cip_python/wrap_ChestConventions.cpp:3556:32: warning: unused function '__pyx_convert_PyByteArray_string_to_py_std__in_string' [-Wunused-function]

static CYTHON_INLINE PyObject *__pyx_convert_PyByteArray_string_to_py_std__in_string(std::string const &__pyx_v_s) {
                               ^
12 warnings generated.
/usr/bin/c++ -bundle -undefined dynamic_lookup -L/.../CIP-build/CIPPython-install/lib -arch x86_64 -arch x86_64 build/temp.macosx-10.5-x86_64-2.7/.../CIP/cip_python/wrap_ChestConventions.o -L/.../CIP-build/lib -L/.../CIP-build/CIPPython-install/lib -lChestConventions -o /.../CIP-build/CIP-build/cip_python/ChestConventions.so

ld: warning: object file (/.../CIP-build/lib/libChestConventions.a(cipChestConventions.cxx.o)) was built for newer OSX version (10.11) than being linked (10.5)

[ 10%] Built target CIP_PYTHON
Scanning dependencies of target cipHelperTEST
[ 11%] Building CXX object Common/Testing/CMakeFiles/cipHelperTEST.dir/cipHelperTEST.cxx.o
[ 11%] Linking CXX executable cipHelperTEST
[ 11%] Built target cipHelperTEST
Scanning dependencies of target cipLobeSurfaceModelTEST
[ 11%] Building CXX object Common/Testing/CMakeFiles/cipLobeSurfaceModelTEST.dir/cipLobeSurfaceModelTEST.cxx.o
[ 11%] Linking CXX executable cipLobeSurfaceModelTEST
[ 11%] Built target cipLobeSurfaceModelTEST
Scanning dependencies of target cipNelderMeadSimplexOptimizerTEST

Scanning dependencies of target SegmentLungLobesTest
[ 28%] Building CXX object CommandLineTools/SegmentLungLobes/CMakeFiles/SegmentLungLobesTest.dir/Testing/SegmentLungLobesTest.cxx.o
[ 29%] Linking CXX executable ../Testing/bin/SegmentLungLobesTest
[ 29%] Built target SegmentLungLobesTest
[ 29%] Generating ReadDicomWriteTagsCLP.h
GenerateCLP --InputXML /.../CIP/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTagsCLP.h
GenerateCLP: Found 1 parameters groups
GenerateCLP: Group "IO" has 4 parameters
Scanning dependencies of target ReadDicomWriteTagsLib
[ 29%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTagsLib.dir/ReadDicomWriteTags.cxx.o

/.../CIP/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:298:28: warning: comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]

        if ( commaLocation != std::string::npos )
             ~~~~~~~~~~~~~ ^  ~~~~~~~~~~~~~~~~~

/.../CIP/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:304:30: warning: comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]

        if ( newlineLocation != std::string::npos )
             ~~~~~~~~~~~~~~~ ^  ~~~~~~~~~~~~~~~~~
2 warnings generated.
[ 29%] Linking CXX static library ../../bin/libReadDicomWriteTagsLib.a
[ 29%] Built target ReadDicomWriteTagsLib
Scanning dependencies of target ReadDicomWriteTags
[ 29%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTags.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o
[ 30%] Linking CXX executable ../../bin/ReadDicomWriteTags
[ 30%] Built target ReadDicomWriteTags
Scanning dependencies of target ReadDicomWriteTagsTest