/bin/sh: unu: command not found
/bin/sh: unu: command not found
/bin/sh: gprobe: command not found
/bin/sh: gprobe: command not found
/bin/sh: gprobe: command not found
/bin/sh: gprobe: command not found
/bin/sh: gprobe: command not found
/bin/sh: gprobe: command not found
/bin/sh: gprobe: command not found
/bin/sh: gprobe: command not found
/bin/sh: gprobe: command not found
/bin/rm: cannot remove ‘/tmp/tmpGioyg5/*’: No such file or directory
E
======================================================================
ERROR: test_vessel_particles.test_vessel_particles
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/ec2-user/Projects/CIP-build/CIPPython-install/lib/python2.7/site-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/ec2-user/Projects/CIP/cip_python/particles/tests/test_vessel_particles.py", line 39, in test_vessel_particles
vp.execute()
File "/home/ec2-user/Projects/CIP-build/CIP-build/cip_python/particles/vessel_particles.py", line 189, in execute
self.save_vtk(out_particles % 3)
File "/home/ec2-user/Projects/CIP-build/CIP-build/cip_python/particles/chest_particles.py", line 563, in save_vtk
im=image_io.read(self._sp_in_file_name)
File "/home/ec2-user/Projects/CIP-build/CIP-build/cip_python/io/image_reader_writer.py", line 29, in read
sitk_image=sitk.ReadImage(file_name)
File "/home/ec2-user/Projects/CIP-build/CIPPython-install/lib/python2.7/site-packages/SimpleITK/SimpleITK.py", line 7728, in ReadImage
return _SimpleITK.ReadImage(*args)
RuntimeError: Exception thrown in SimpleITK ReadImage: /home/blowekamp/anaconda/conda-bld/work/Code/IO/src/sitkImageReaderBase.cxx:67:
sitk::ERROR: Unable to determine ImageIO reader for "/tmp/tmpGioyg5/ct-deconv.nrrd"
-------------------- >> begin captured stdout << ---------------------
/tmp/tmpGioyg5
Resetting param groups...
Building param groups...
Starting pass 1...
Finished pass 1.
Starting pass 2...
Finished pass 2.
Starting pass 3...
Finished pass 3.
Probing...
Finished probing.
Saving to vtk...
Cleaning tempoarary directory...
--------------------- >> end captured stdout << ----------------------
----------------------------------------------------------------------
Ran 1 test in 0.145s
FAILED (errors=1)
2.35s
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