/Users/jonieva/Projects/CIP-build/CIP-build/CommandLineTools/Testing/bin/GenerateRegionHistogramsAndParenchymaPhenotypesTest "--compareCSV" "/Users/jonieva/Projects/CIP/CommandLineTools/GenerateRegionHistogramsAndParenchymaPhenotypes/Data/Baseline/GenerateRegionHistogramsAndParenchymaPhenotypes_Test_parenchymaPhenotypes.csv" "/Users/jonieva/Projects/CIP-build/CIP-build/CommandLineTools/Testing/Output/GenerateRegionHistogramsAndParenchymaPhenotypes_Test_parenchymaPhenotypes.csv" "--compareCSV" "/Users/jonieva/Projects/CIP/CommandLineTools/GenerateRegionHistogramsAndParenchymaPhenotypes/Data/Baseline/GenerateRegionHistogramsAndParenchymaPhenotypes_Test_regionHistogram.csv" "/Users/jonieva/Projects/CIP-build/CIP-build/CommandLineTools/Testing/Output/GenerateRegionHistogramsAndParenchymaPhenotypes_Test_regionHistogram.csv" "ModuleEntryPoint" "-c" "/Users/jonieva/Projects/CIP/Testing/Data/Input/ct-64.nrrd" "-p" "/Users/jonieva/Projects/CIP/Testing/Data/Input/lm-64.nrrd" "--op" "/Users/jonieva/Projects/CIP-build/CIP-build/CommandLineTools/Testing/Output/GenerateRegionHistogramsAndParenchymaPhenotypes_Test_parenchymaPhenotypes.csv" "--oh" "/Users/jonieva/Projects/CIP-build/CIP-build/CommandLineTools/Testing/Output/GenerateRegionHistogramsAndParenchymaPhenotypes_Test_regionHistogram.csv"

Reading CT image...
Reading label map image...
Computing histograms with partial lung label map...
Writing histogram to file...
Computing parenchyma phenotypes...
Writing phenotypes to file...
DONE.