LoginAll Dashboards

Thursday, August 13 2026 18:15:13

CIP

• Dashboard
• Back
• Calendar2019-06-06
• Previous
• Current
• Next
• Project
  • Home
  • Documentation
  • Repository
  • Bug Tracker
  • Subscribe

2.75s

Could not import jpeg_ls
Could not import gdcm
E
======================================================================
ERROR: Failure: ImportError (
Pydicom via 'import dicom' has been removed in pydicom version 1.0.
Please install the `dicom` package to restore function of code relying
on pydicom 0.9.9 or earlier. E.g. `pip install dicom`.
Alternatively, most code can easily be converted to pydicom > 1.0 by
changing import lines from 'import dicom' to 'import pydicom'.
See the Transition Guide at
https://pydicom.github.io/pydicom/stable/transition_to_pydicom1.html.
)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/Users/acil-user/Projects/CIP-build/CIPPython-install/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName
    addr.filename, addr.module)
  File "/Users/acil-user/Projects/CIP-build/CIPPython-install/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/Users/acil-user/Projects/CIP-build/CIPPython-install/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/Users/acil-user/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_transfer_particles_region_type_values.py", line 3, in <module>
    from cip_python.particles.transfer_particles_region_type_values import *
  File "/Users/acil-user/Projects/CIP-build/CIP-build/cip_python/particles/__init__.py", line 1, in <module>
    from .chest_particles import *
  File "/Users/acil-user/Projects/CIP-build/CIP-build/cip_python/particles/chest_particles.py", line 10, in <module>
    from ..utils import ReadNRRDsWriteVTK
  File "/Users/acil-user/Projects/CIP-build/CIP-build/cip_python/utils/__init__.py", line 10, in <module>
    from .query_dicom_directories import *
  File "/Users/acil-user/Projects/CIP-build/CIP-build/cip_python/utils/query_dicom_directories.py", line 4, in <module>
    import dicom
  File "/Users/acil-user/Projects/CIP-build/CIPPython-install/lib/python2.7/site-packages/dicom.py", line 11, in <module>
    raise ImportError(msg)
ImportError: 
Pydicom via 'import dicom' has been removed in pydicom version 1.0.
Please install the `dicom` package to restore function of code relying
on pydicom 0.9.9 or earlier. E.g. `pip install dicom`.
Alternatively, most code can easily be converted to pydicom > 1.0 by
changing import lines from 'import dicom' to 'import pydicom'.
See the Transition Guide at
https://pydicom.github.io/pydicom/stable/transition_to_pydicom1.html.

-------------------- >> begin captured logging << --------------------
pydicom: DEBUG: Could not import jpeg_ls
pydicom: DEBUG: Could not import gdcm
matplotlib: DEBUG: $HOME=/Users/acil-user
matplotlib: DEBUG: matplotlib data path /Users/acil-user/Projects/CIP-build/CIPPython-install/lib/python2.7/site-packages/matplotlib/mpl-data
matplotlib: DEBUG: loaded rc file /Users/acil-user/Projects/CIP-build/CIPPython-install/lib/python2.7/site-packages/matplotlib/mpl-data/matplotlibrc
matplotlib: DEBUG: matplotlib version 2.2.3
matplotlib: DEBUG: interactive is False
matplotlib: DEBUG: platform is darwin
matplotlib: DEBUG: loaded modules: ['PIL.io', 'email.MIMEAudio', 'vtkmodules.vtkFiltersAMR', 'numpy.core.info', 'nose.plugins.doctest', 'nose.plugins.tempfile', 'pydicom.re', 'ctypes.os', 'hotshot.warnings', 'hotshot.stats', 'gc', 'vtkmodules.vtkIOSQLPython', 'vtkmodules.vtkFiltersModelingPython', 'pkg_resources._vendor.traceback', 'vtkmodules.vtkFiltersSourcesPython', 'cffi.model', 'nose.plugins.attrib', 'numpy.random.threading', 'logging.weakref', 'vtkmodules.vtkIOAMRPython', 'pprint', 'nose.plugins.logcapture', 'pydicom.decimal', 'nose.new', 'unittest.sys', 'SimpleITK.builtins', 'numpy.core.umath', 'nose.os', 'pydicom.dicomdir', 'numpy._pytesttester', 'string', 'vtkmodules.vtkFiltersTexture', 'numpy.lib.arraysetops', 'nose.plugins.__builtin__', 'encodings.utf_8', 'xml.etree.warnings', 'xml.etree.sys', 'email.quoprimime', 'numpy.ctypeslib', 'json.encoder', 'subprocess', 'numpy.core.machar', '_ast', 'pydicom.random', 'nose.plugins.optparse', 'vtkmodules.vtkFiltersSMP', 'vtkmodules.vtkFiltersGeometry', 'email.codecs', 'vtkmodules.util.vtkVariant', 'pydicom.sequence', 'numpy.ma.extras', 'numpy.fft.fftpack_lite', 'PIL.atexit', 'multiprocessing', 'vtkmodules.vtkIOCorePython', 'dis', 'vtkmodules.vtkIOCityGMLPython', 'numpy.lib', 'logging.threading', 'cip_python.common.paths', 'pkg_resources._vendor.pprint', 'nose.plugins.multiprocessing', 'ctypes.macholib.dyld', 'future.utils.__builtin__', 'pydicom.charset', 'hotshot.profile', 'vtkmodules.vtkIOInfovis', 'vtkmodules.vtkCommonCore', 'matplotlib.cbook.warnings', 'vtkmodules.vtkFiltersParallelPython', 'pyparsing', 'matplotlib.cbook.textwrap', 'pkg_resources.extern.appdirs', '_thread', 'hotshot.hotshot', 'pkg_resources._vendor.collections', 'numpy._globals', 'numpy.lib.npyio', 'xml.sax.io', 'vtkmodules.vtkRenderingLODPython', 'email.random', 'nose.tools.unittest', 'nose.plugins.re', 'vtkmodules.vtkCommonSystem', 'vtkmodules.vtkIOVeraOut', 'cip_python.utils.os', 'hotshot.log', 'nose.plugins.sys', 'xml.etree.ElementPath', 'optparse', 'unittest.suite', 'PIL.Image', 'cip_python.particles.os', '_ctypes', 'vtkmodules.vtkRenderingLabelPython', 'glob', 'exceptions', 'json.scanner', 'PIL._util', 'vtkmodules.vtkRenderingVolumePython', 'codecs', 'vtkmodules.vtkIOExportPython', 'cip_python.utils.numpy', 'vtkmodules.vtkFiltersFlowPathsPython', 'numpy.os', 'mkl_fft._numpy_fft', 'vtkmodules.vtkViewsInfovisPython', 'vtkmodules.vtkImagingSourcesPython', 'email.socket', 'vtkmodules.vtkFiltersTopology', 'StringIO', 'cip_python.common.numpy', '_hotshot', 'pkg_resources', 'weakref', 'numpy.core._internal', 'vtkmodules.vtkIOLegacyPython', 'doctest', 'vtkmodules.vtkIOXMLParser', 'vtkmodules.vtkFiltersTexturePython', 'distutils.sys', 'numpy.lib.arraypad', 'future.types.__future__', 'base64', 'pydicom.warnings', '_sre', 'email.FeedParser', 'future.types.newdict', 'future.utils.sys', 'vtkmodules.vtkRenderingCore', 'pyexpat.errors', 'email.charset', 'vtkmodules.vtkFiltersProgrammablePython', 'pkg_resources._vendor.datetime', 'future.utils.numbers', 'select', 'ctypes._ctypes', '_heapq', 'six.moves.urllib', 'vtkmodules.vtkIOGeometryPython', 'numpy.lib.financial', 'pydicom._version', 'binascii', 'nose.plugins.os', 'vtkmodules.vtkCommonColorPython', 'cip_python.common.inspect', 'email.MIMEMessage', 'email._parseaddr', 'email.sys', 'hotshot.parser', 'unittest.fnmatch', 'pkg_resources._vendor.six.moves.urllib', 'numpy.linalg.lapack_lite', 'numpy.polynomial.chebyshev', 'vtkmodules.vtkImagingFourier', 'pkg_resources.extern.six.moves.urllib', 'cPickle', 'numpy.core', 'numpy.polynomial.hermite_e', 'vtkmodules.vtkFiltersSelection', 'vtkmodules.vtkRenderingCorePython', 'future.builtins.future_builtins', 'vtkmodules.vtkParallelCore', 'cffi.lock', '_posixsubprocess32', 'vtkmodules.vtkRenderingImage', 'numpy.core.fromnumeric', 'nose.plugins', 'matplotlib._version', 'nose.plugins.xml', 'pydicom.datetime', 'PIL.warnings', 'pkg_resources.os', 'vtkmodules.vtkCommonDataModelPython', 'vtkmodules.vtkCommonDataModel', 'pkg_resources._vendor.copy', 'vtkmodules.vtkRenderingOpenGL2Python', 'encodings.aliases', 'pydicom.dataelem', 'fnmatch', 'sre_parse', 'vtkmodules.vtkImagingColor', 'vtkmodules.vtkIOAsynchronous', 'pickle', 'vtkmodules.vtkIOImport', 'numpy.random.warnings', 'xml.sax.types', 'pydicom.pixel_data_handlers.pydicom', 'logging.cStringIO', '_bisect', 'vtkmodules.vtkIOEnSightPython', 'nose.time', 'numpy.lib.polynomial', 'numpy.compat', 'pkg_resources._vendor.os', 'pkg_resources.extern.six', 'numbers', 'nose.pyversion', 'numpy.core.records', 'vtkmodules.vtkInfovisLayoutPython', 'vtkmodules.vtkViewsContext2DPython', 'email.message', 'email.Header', 'vtkmodules.vtkIOCityGML', 'email.MIMEBase', 'strop', 'PIL.struct', 'vtkmodules.vtkFiltersVerdictPython', 'numpy.core.numeric', 'pydicom.pixel_data_handlers.struct', 'vtkmodules.vtkRenderingContext2D', 'matplotlib.testing', 'vtkmodules.util', 'pydicom.inspect', 'future.builtins.iterators', 'vtkmodules.vtkIOExportPDF', 'vtkmodules.vtkImagingStencilPython', 'profile', 'pydicom.sys', 'six.moves', 'ctypes.util', 'nose.tools', 'vtkmodules.vtkImagingCore', 'vtkmodules.vtkFiltersAMRPython', 'vtkmodules.vtkRenderingGL2PSOpenGL2Python', 'future.utils.inspect', 'numpy.core._multiarray_tests', 'xml.etree.xml', 'pydicom.filebase', 'multiprocessing.sys', 'cip_python.utils', 'numpy.lib.arrayterator', 'email.parser', 'pkg_resources._vendor.__builtin__', 'os.path', 'vtkmodules.vtkChartsCorePython', 'nose.sys', 'pkg_resources.extern.packaging.specifiers', 'email.base64mime', 'pydicom.util.datetime', '_weakrefset', 'vtkmodules.vtkImagingMathPython', 'nose.plugins.plugintest', 'vtkmodules.vtkIOEnSight', 'cip_python.common.anatomic_structures_manager', 'unittest.traceback', 'unittest.os', 'vtkmodules.vtkInteractionStylePython', 'vtkmodules.vtkRenderingOpenGL2', 'six', 'numpy.version', 'vtkmodules.vtkInteractionWidgets', 'vtkmodules.vtkIOMoviePython', 'functools', 'pkg_resources._vendor.weakref', 'cffi', 'future.types.newobject', 'pydicom.filewriter', 'sysconfig', 'email.MIMEImage', 'cip_python.utils.apply_label_from_classification', 'pkg_resources._vendor._thread', 'vtkmodules.vtkRenderingMatplotlibPython', 'vtkmodules.vtkDomainsChemistry', 'email.MIMEText', 'numpy.polynomial.legendre', 'nose.plugins.testid', 'nose.itertools', 'builtins', 'uuid', 'vtkmodules.vtkFiltersSources', 'pydicom.util', 'tempfile', 'PIL.sys', 'vtk', 'vtkmodules.vtkFiltersHybridPython', 'imp', 'pkg_resources._vendor', 'multiprocessing.os', 'pydicom.struct', 'matplotlib.compat', 'vtkmodules.vtkFiltersHyperTreePython', 'PIL.numbers', 'multiprocessing.itertools', 'vtkmodules.vtkRenderingVolumeOpenGL2Python', 'nose.plugins.cover', 'vtkmodules.vtkIOExodus', 'unittest.time', 'vtkmodules.vtkIOImage', 'future.types.numbers', 'unittest.functools', 'cffi.api', 'pkg_resources._vendor.six', 'cip_python.common.cip_python', 'future.builtins.future', 'unittest.util', 'future.utils.types', 'pkg_resources.errno', 'email.urllib', 'numpy.core.os', 'cip_python.utils.optparse', 'numpy._mklinit', 'httplib', 'pydicom._private_dict', 'unittest.StringIO', 'pydicom.os', 'decimal', 'numpy.lib._datasource', 'token', 'email.encoders', 'pydicom.collections', 'vtkmodules.vtkIOMINCPython', 'csv', 'cStringIO', 'PIL.ImageMode', 'cmd', 'nose.plugins.signal', 'numpy.random.mtrand', 'numpy.core._add_newdocs', 'multiprocessing.process', 'pkg_resources.extern.packaging.requirements', 'PIL._imaging', 'nose.loader', 'vtkmodules.vtkIOInfovisPython', 'nose.traceback', 'pydicom', 'future.types.struct', 'nose.plugins.doctests', 'PIL._binary', 'json', 'vtkmodules.vtkCommonComputationalGeometry', 'json.struct', '_cython_0_29_3', 'pydicom.encaps', 'pkg_resources._vendor.packaging.__about__', 're', 'numpy.core.collections', 'future.types', 'nose.plugins.traceback', 'email.quopri', 'pydicom.errors', 'vtkmodules.vtkIOXMLParserPython', 'numpy.polynomial.polyutils', 'math', 'matplotlib.fontconfig_pattern', 'vtkmodules.vtkIOAMR', 'ast', 'vtkmodules.vtkIOImagePython', 'pydicom.pixel_data_handlers.numpy', 'numpy.lib.ufunclike', 'pydicom.util.binascii', 'nose.tools.nontrivial', 'ctypes.struct', 'numpy.core.sys', 'vtkmodules.vtkFiltersSelectionPython', 'cip_python.particles.chest_particles', 'numpy.testing._private', '_scproxy', 'vtkmodules.vtkCommonColor', '_locale', 'pydicom.multival', 'logging', 'vtkmodules.vtkFiltersParallelImagingPython', 'thread', 'traceback', 'vtkmodules.vtkIOMINC', 'nose.plugins.failuredetail', 'pydicom.pixel_data_handlers', 'vtkmodules.vtkIOXdmf2Python', 'errno', 'multiprocessing.util', 'pkg_resources._vendor.packaging.markers', 'pkg_resources._vendor.packaging.version', 'future.types.newbytes', 'pydicom.pydicom', 'vtkmodules.vtkIOPLYPython', '_collections', 'ctypes.macholib.os', 'vtkmodules.vtkRenderingVolumeOpenGL2', 'xml.sax.sys', 'nose.optparse', 'vtkmodules.vtkDomainsChemistryOpenGL2', 'numpy.lib.twodim_base', 'future.builtins', 'future.types.collections', 'xml.parsers.pyexpat', 'array', 'email.Errors', 'vtkmodules.util.vtkConstants', 'cip_python.particles.subprocess', 'nose.plugins.deprecated', 'ctypes.sys', 'posixpath', 'vtkmodules.vtkImagingMorphologicalPython', 'pkg_resources._vendor.packaging._compat', 'numpy.core.arrayprint', 'nose.nose', 'types', 'numpy.lib.stride_tricks', 'numpy.lib.scimath', 'vtkmodules.vtkIOCore', 'json._json', 'xml.sax.os', 'vtkmodules.vtkImagingHybrid', '_codecs', 'pydicom.util.pydicom', 'cffi.types', 'nose.core', 'email.feedparser', 'future.builtins.__builtin__', '_osx_support', 'numpy.core._string_helpers', 'email.time', 'vtkmodules.vtkFiltersHybrid', 'vtkmodules.vtkIOAsynchronousPython', 'hashlib', 'cip_python.common.SimpleITK', 'keyword', 'pydicom.pixel_data_handlers.rle_handler', 'pkg_resources._vendor.pyparsing', 'vtkmodules.vtkFiltersStatistics', 'numpy.lib.nanfunctions', 'xml.sax.saxutils', 'unittest.weakref', 'PIL.logging', 'vtkmodules.vtkIOParallel', 'future', 'posix', 'pydicom.numpy', 'cip_python.common.collections', 'nose.selector', 'backports.pkgutil', 'future.types.newint', 'cffi.thread', 'SimpleITK.importlib', 'vtkmodules.vtkCommonMathPython', 'sre_compile', 'pkg_resources._vendor.threading', '_hashlib', 'test_transfer_particles_region_type_values', 'vtkmodules.vtkCommonMiscPython', 'numpy.lib.shape_base', 'logging.collections', '_csv', 'email.base64', 'vtkmodules.vtkIOVideo', '__main__', 'nose.plugins.unittest', 'multiprocessing.atexit', 'vtkmodules.vtkImagingFourierPython', 'numpy.core._dtype', 'vtkmodules.vtkRenderingAnnotation', 'matplotlib._color_data', 'unittest.result', 'bz2', 'vtkmodules.vtkViewsContext2D', 'vtkmodules.vtkFiltersPythonPython', 'nose.config', 'encodings.codecs', 'vtkmodules.vtkIOExodusPython', 'cip_python.common.xml', 'SimpleITK.weakref', 'vtkmodules.vtkImagingGeneralPython', 'email.MIMEMultipart', 'vtkmodules.vtkFiltersTopologyPython', 'email.string', 'unittest.difflib', '_ssl', 'numpy.lib.index_tricks', 'warnings', 'encodings.ascii', 'pydicom.config', 'future.builtins.decimal', 'vtkmodules.vtkPythonContext2DPython', 'abc', 'numpy.__config__', 'nose.plugins.StringIO', 'matplotlib.cbook', 'cip_python.utils.pydicom', 'multiprocessing._multiprocessing', 'ctypes.macholib', 'vtkmodules.vtkFiltersPointsPython', 'future.types.string', 'bdb', 'pydicom.hashlib', 'pkg_resources.extern.six.moves', 'nose.tools.trivial', 'nose.plugins.pickle', 'future.types.newstr', 'numpy.linalg.linalg', 'vtkmodules.vtkImagingGeneral', 'nose.plugins.debug', 'nose.ConfigParser', 'vtkmodules.vtkFiltersModeling', 'numpy.lib._iotools', 'email.iterators', 'matplotlib.cbook.functools', 'vtkmodules.vtkRenderingLOD', 'future.standard_library', 'cip_python.common.chest_conventions', 'random', 'unittest.types', 'nose.plugins.isolate', 'datetime', 'vtkmodules.vtkFiltersGeneral', 'vtkmodules.vtkCommonMath', 'logging.os', 'ctypes._endian', 'encodings.encodings', 'unittest.pprint', 'matplotlib.sys', 'nose.cStringIO', 'numpy.core.functools', 'xml', 'copy', 'importlib', 'nose.stat', 'pydicom.util.sys', 'six.moves.urllib.request', 'numpy.core._dtype_ctypes', 'pkg_resources._vendor.warnings', 'cip_python.common.future', 'logging.thread', 'xml.etree.ElementTree', 'numpy.core._type_aliases', 'pydicom._uid_dict', 'numpy.lib._version', 'vtkmodules.vtkRenderingVolume', 'pydicom.pixel_data_handlers.numpy_handler', 'nose.plugins.__future__', 'pydicom.misc', 'vtkmodules.vtkFiltersExtraction', 'pydicom.fileutil', 'zipfile', 'repr', 'PIL._version', 'ssl', 'hotshot', 'new', 'distutils.re', 'vtkmodules.vtkImagingStatisticsPython', 'nose.plugins.errorclass', 'nose.plugins.inspect', 'nose.plugins.pkg_resources', 'numpy.lib.type_check', 'pydicom.itertools', 'resource', 'bisect', 'unittest.runner', 'nose.__future__', 'vtkmodules.vtkIOXML', 'unittest.re', 'threading', 'nose.plugins.skip', 'cip_python.common.warnings', 'pyexpat.model', 'pkg_resources._vendor.six.moves', 'nose.failure', 'vtkmodules.vtkIOTecplotTable', 'hotshot._hotshot', 'cycler', 'numpy.fft.helper', 'numpy.fft', 'email.Message', 'vtkmodules.vtkViewsInfovis', 'future.backports.misc', 'locale', 'PIL.collections', 'ctypes.macholib.re', 'vtkmodules.vtkParallelCorePython', 'atexit', 'email.quopriMIME', 'pydicom.compat', 'pkg_resources._vendor.re', 'pydicom.traceback', 'calendar', 'vtkmodules.vtkInfovisCore', 'sphinxcontrib', 'nose.imp', 'dateutil', 'pydicom.uuid', 'matplotlib.colors', 'plistlib', 'pydicom.pixel_data_handlers.logging', 'numpy.lib.histograms', 'vtkmodules.vtkRenderingFreeTypePython', 'pydicom.logging', 'urllib', 'numpy.core.numerictypes', 'nose.plugins.xunit', 'pkg_resources.extern.packaging.version', 'vtkmodules.vtkFiltersGeneralPython', 'nose.tokenize', 'pkg_resources._vendor.string', 'pkg_resources.sys', 'ctypes.subprocess', 'email', 'fcntl', 'unittest.case', 'mkl_fft._version', 'mkl_fft._pydfti', 'swig_runtime_data4', 'Queue', 'numpy.lib.info', 'ctypes', 'matplotlib', 'nose.inspector', 'vtkmodules.vtkIOExportOpenGL2', 'vtkmodules.util.misc', 'vtkmodules.vtkIOExport', 'cip_python.utils.anonymize_dicom', 'cffi.sys', 'json.re', 'nose.plugins.hotshot', 'numpy.matrixlib.defmatrix', 'nose.importer', 'xml.etree', 'unittest.signal', 'itertools', 'numpy.ctypes', 'opcode', 'pstats', 'future.utils.copy', 'vtkmodules.vtkViewsCorePython', 'pdb', 'future.types.newrange', 'pydicom.dataset', 'numpy.testing._private.nosetester', 'email.uu', 'nose.plugins.codecs', 'unittest', 'vtkmodules.vtkIOGeometry', 'cip_python.common.chest_conventions_static', 'xml.parsers', 'mkl_fft', 'nose.util', 'future.builtins.io', 'numpy.testing._private.utils', 'pydicom.valuerep', 'unittest.collections', 'pkgutil', 'cip_python.common.os', 'platform', 'vtkmodules.vtkFiltersExtractionPython', 'cip_python.common', 'nose.plugins.base', 'sre_constants', 'numpy.core._methods', 'vtkmodules.vtkIOVideoPython', 'numpy.core.function_base', 'numpy.compat.py3k', 'pkg_resources._vendor.sre_constants', 'pydicom.values', 'numpy', 'vtkmodules.util.os', 'parser', 'json.decoder', 'subprocess32', 'email.utils', 'numpy.polynomial._polybase', 'nose.plugins.builtin', 'vtkmodules.vtkIOMovie', 'cip_python.common.csv', 'logging.atexit', 'matplotlib.cbook._backports', 'hotshot.symbol', 'future.builtins.newsuper', 'email.MIMENonMultipart', 'vtkmodules.vtkFiltersSMPPython', 'email.email', 'xml.etree.re', 'zlib', 'cip_python', 'vtkmodules.vtkFiltersImaging', 'nose.plugins.capture', 'vtkmodules.vtkCommonTransformsPython', 'nose.types', 'multiprocessing.weakref', 'pydicom.uid', 'vtkmodules.vtkFiltersCorePython', 'pydicom.contextlib', 'copy_reg', 'vtkmodules.vtkViewsCore', 'pkg_resources._vendor.packaging.specifiers', 'vtkmodules.vtkFiltersProgrammable', 'pkg_resources._vendor.appdirs', 'nose.plugins.logging', 'nose.plugins.threading', 'site', 'PIL.os', 'pydicom.pixel_data_handlers.pillow_handler', 'nose.proxy', 'vtkmodules.vtkIONetCDF', 'io', 'numpy.fft.info', 'vtkmodules.vtkRenderingImagePython', 'pyexpat', 'shutil', 'backports_abc', 'vtkmodules.vtkIOXMLPython', 'vtkmodules.vtkRenderingContextOpenGL2', 'numpy.polynomial.hermite', 'vtkmodules.vtkRenderingLabel', '_json', 'pydicom.pixel_data_handlers.io', 'vtkmodules.vtkImagingStatistics', 'numpy.linalg.info', 'vtkmodules.vtkCommonExecutionModel', 'numpy.sys', 'nose.plugins.time', 'numpy.fft.fftpack', 'email.binascii', 'nose.tools.re', 'future.builtins.newround', 'matplotlib.rcsetup', 'vtkmodules.vtkImagingMath', 'numpy.core._ctypes', 'vtkmodules.vtkIOExportPDFPython', 'vtkmodules.vtkImagingSources', 'pkg_resources.extern', 'vtkmodules.vtkDomainsChemistryOpenGL2Python', 'numpy.lib.utils', 'numpy.random', 'rfc822', 'vtkmodules.vtkCommonExecutionModelPython', 'json.json', 'email.re', 'sys', 'numpy.compat._inspect', 'cffi.error', 'multiprocessing.subprocess', 'SimpleITK.operator', 'nose.logging', 'email.cStringIO', 'vtkmodules.vtkIOLegacy', 'vtkmodules.vtkIOParallelXMLPython', 'pkg_resources._vendor.packaging', 'vtkmodules.vtkGeovisCorePython', '_weakref', 'difflib', 'vtkmodules.vtkInteractionImage', 'pkg_resources.extern.pyparsing', 'urlparse', 'ctypes.macholib.dylib', 'unittest.warnings', 'vtkmodules.vtkIOSegY', 'gzip', 'future.types.future', 'vtkmodules.vtkImagingStencil', 'nose.case', 'heapq', 'xml.sax.urlparse', 'distutils', 'vtkmodules.vtkFiltersGeneric', 'vtkmodules.vtkIOExportOpenGL2Python', 'numpy.core.einsumfunc', 'vtkmodules.vtkRenderingFreeType', 'pkg_resources.extern.packaging', 'vtkmodules.vtkIOPLY', 'vtkmodules.all', 'vtkmodules.vtkIOTecplotTablePython', 'vtkmodules.vtkIONetCDFPython', 'email.mime', 'future.utils', 'ctypes.macholib.itertools', 'PIL', 'struct', 'xml.sax.urllib', 'vtkmodules.vtkIOVeraOutPython', 'numpy.core.ctypes', 'numpy.testing', '_abcoll', 'collections', 'pkg_resources._vendor.sys', 'numpy.core._multiarray_umath', 'unittest.main', 'email.Parser', 'vtkmodules.vtkRenderingGL2PSOpenGL2', 'nose.plugins.pdb', 'zipimport', 'pkg_resources._vendor.packaging._structures', 'cffi.weakref', 'pkg_resources.extern.sys', 'pkg_resources.extern.packaging.markers', 'nose.plugins.cStringIO', 'textwrap', 'pydicom.util.fixes', 'vtkmodules.vtkImagingCorePython', 'vtkmodules.vtkFiltersCore', 'vtkmodules.vtkImagingMorphological', 'ConfigParser', 'numpy.linalg._umath_linalg', 'multiprocessing.multiprocessing', 'future.backports', 'pydicom.util.hexutil', 'SimpleITK.SimpleITK', 'signal', 'numpy.random.operator', 'email.calendar', 'vtkmodules.vtkImagingHybridPython', 'vtkmodules.vtkFiltersStatisticsPython', 'dateutil._version', 'nose', 'vtkmodules.vtkRenderingContext2DPython', 'numpy.core.multiarray', 'quopri', 'distutils.types', 'vtkmodules.vtkIOLSDynaPython', 'pkg_resources.py31compat', 'google', 'numpy.core.getlimits', 'matplotlib.json', 'xml.parsers.expat', 'hotshot.os', 'PIL.cffi', 'nose.plugins.collect', 'vtkmodules.vtkImagingColorPython', 'vtkmodules.vtkCommonMisc', 'nose.unittest', 'PIL.builtins', 'logging.traceback', 'numpy.matrixlib', 'SimpleITK.sys', 'vtkmodules.vtkFiltersPoints', '_multiprocessing', 'backports', 'nose.warnings', 'numpy.lib.mixins', 'numpy.ma.core', 'vtkmodules.vtkFiltersImagingPython', 'pydicom.copy', 'email.errors', 'nose.plugins.manager', 'pydicom._dicom_dict', 'pydicom.tag', 'mpl_toolkits', 'SimpleITK._SimpleITK', 'UserDict', 'cip_python.particles', 'inspect', 'vtkmodules.vtkCommonTransforms', 'numpy.linalg', 'numpy.polynomial.laguerre', 'logging.sys', 'vtkmodules.vtkInteractionImagePython', 'vtkmodules.vtkCommonComputationalGeometryPython', 'future.builtins.newnext', 'unittest.loader', '_functools', 'json.sys', 'email.Iterators', 'socket', 'cip_python.common.geometry_topology_data', 'numpy.core.memmap', 'numpy.core.overrides', 'pydicom.pixel_data_handlers.sys', 'email.base64MIME', 'cython_runtime', 'nose.result', 'email.Charset', 'ctypes.macholib.framework', 'nose.suite', 'vtkmodules.vtkInfovisLayout', 'nose.plugins.prof', 'os', 'marshal', 'distutils.version', 'matplotlib.cbook.deprecation', '__future__', 'vtkmodules.vtkRenderingMatplotlib', 'vtkmodules.vtkCommonSystemPython', 'numpy.core.shape_base', 'PIL.math', 'vtkmodules.vtkFiltersGeometryPython', '__builtin__', 'nose.re', 'future.types.newlist', 'numpy.polynomial', 'xml.sax.xmlreader', 'vtkmodules.vtkIOParallelPython', 'pydicom.io', 'operator', 'vtkmodules.vtkIOSegYPython', 'distutils.string', 'vtkmodules.vtkInteractionStyle', 'cip_python.common.time', 'cip_python.common.platform', 'vtkmodules.vtkFiltersHyperTree', 'multiprocessing.threading', 'pkg_resources._vendor.packaging.requirements', '_socket', 'future.types.sys', 'email.Utils', 'vtkmodules.vtkPythonContext2D', 'cip_python.common.sys', 'encodings.latin_1', 'xml.sax.handler', 'vtkmodules.vtkFiltersParallel', 'vtkmodules.vtkRenderingAnnotationPython', '_warnings', 'vtkmodules.vtkDomainsChemistryPython', 'vtkmodules.vtkInfovisCorePython', 'encodings.__builtin__', 'nose.plugins.cPickle', 'tokenize', 'email.os', 'future.builtins.misc', 'numpy._distributor_init', 'nose.plugins.itertools', 'pwd', 'nose.plugins.nose', 'vtkmodules.vtkIOXdmf2', 'vtkmodules.vtkFiltersGenericPython', '_sysconfigdata', '_struct', 'numpy.core.numpy', 'future.types.copy', 'nose.textwrap', 'uu', 'ctypes.macholib.sys', 'vtkmodules.vtkIOParallelXML', 'numpy.random.numpy', 'logging.time', 'matplotlib.compat.subprocess', 'numpy.lib.function_base', 'logging.warnings', 'nose.plugins.textwrap', 'mimetools', 'nose.exc', 'multiprocessing.signal', 'pydicom.datadict', 'vtkmodules.vtkChartsCore', 'xml.sax', 'nose.inspect', 'logging.codecs', '_random', 'encodings', 'vtkmodules.vtkRenderingContextOpenGL2Python', 'vtkmodules.vtkIOSQL', 'vtkmodules.vtkFiltersVerdict', 'contextlib', 'pydicom.pixel_data_handlers.PIL', 'vtkmodules.vtkGeovisCore', 'SimpleITK.numpy', 'numpy.polynomial.polynomial', 'email.Generator', 'vtkmodules.vtkIOLSDyna', '_io', 'vtkmodules.vtkFiltersPython', 'importlib.sys', 'grp', 'linecache', 'vtkmodules.vtkIOImportPython', 'numpy.core.defchararray', 'gettext', 'nose.tools.nose', 'email.warnings', 'xml.sax._exceptions', 'genericpath', 'stat', 'nose.plugins.Queue', 'symbol', 'urllib2', 'pydicom.filereader', 'unittest.signals', 'numpy.core.warnings', 'email.Encoders', 'vtkmodules.util.sys', 'SimpleITK', 'backports.functools_lru_cache', 'ctypes.ctypes', 'nose.plugins.multiprocess', 'numpy.lib.format', 'hotshot.pstats', 'numpy.ma', 'vtkmodules', 'future.utils.functools', 'vtkmodules.vtkInteractionWidgetsPython', 'numpy.testing._private.decorators', 'vtkmodules.vtkCommonCorePython', 'pydicom.bisect', 'nose.plugins.allmodules', 'vtkmodules.vtkFiltersFlowPaths', 'vtkmodules.vtkFiltersParallelImaging', 'pkg_resources._vendor.types', 'nose.tools.time', 'time', 'nose.plugins.warnings', 'future_builtins']
matplotlib: DEBUG: CACHEDIR=/Users/acil-user/.matplotlib
matplotlib.font_manager: DEBUG: Using fontManager instance from /Users/acil-user/.matplotlib/fontList.json
matplotlib.backends: DEBUG: backend MacOSX version unknown
--------------------- >> end captured logging << ---------------------

----------------------------------------------------------------------
Ran 1 test in 0.002s

FAILED (errors=1)

CDash 2.2.2 © Kitware | Report problems