/home/ec2-user/canopy/lib/python2.7/site-packages/pandas/io/excel.py:626: UserWarning: Installed openpyxl is not supported at this time. Use >=1.6.1 and <2.0.0.
.format(openpyxl_compat.start_ver, openpyxl_compat.stop_ver))
F
======================================================================
FAIL: test_body_composition_phenotypes.test_execute
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/ec2-user/canopy/lib/python2.7/site-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/home/ec2-user/Projects/ChestImagingPlatform-release/cip_python/phenotypes/tests/test_body_composition_phenotypes.py", line 23, in test_execute
df = bc_pheno.execute(ct, lm, 'simple', spacing)
File "/home/ec2-user/Projects/CIP/cip_python/phenotypes/body_composition_phenotypes.py", line 277, in execute
c.GetChestWildCardName(), n)
File "/home/ec2-user/Projects/CIP/cip_python/phenotypes/body_composition_phenotypes.py", line 376, in add_pheno_group
self.add_pheno([chest_region, chest_type], pheno_name, pheno_val)
File "/home/ec2-user/Projects/CIP/cip_python/phenotypes/phenotypes.py", line 220, in add_pheno
c.GetChestWildCardName(), "Invalid phenotype name"
AssertionError: Invalid phenotype name
----------------------------------------------------------------------
Ran 1 test in 0.026s
FAILED (failures=1)
0.58s
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