CDash : CIP

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Test: test_body_composition_phenotypes (Failed)
Build: ChestImagingPlatform-Linux-3.10.0-123.el7.x86_64-x86_64-incr-SL-ON-SL-OFF (ip-172-31-38-141.ec2.internal) on 2015-01-06 16:54:04

Exit Value	1

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Test output

/home/ec2-user/canopy/lib/python2.7/site-packages/pandas/io/excel.py:626: UserWarning: Installed openpyxl is not supported at this time. Use >=1.6.1 and <2.0.0.
  .format(openpyxl_compat.start_ver, openpyxl_compat.stop_ver))
F
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FAIL: test_body_composition_phenotypes.test_execute
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Traceback (most recent call last):
  File "/home/ec2-user/canopy/lib/python2.7/site-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/home/ec2-user/Projects/ChestImagingPlatform/cip_python/phenotypes/tests/test_body_composition_phenotypes.py", line 23, in test_execute
    df = bc_pheno.execute(ct, lm, 'simple', spacing)
  File "/home/ec2-user/Projects/CIP/cip_python/phenotypes/body_composition_phenotypes.py", line 277, in execute
    c.GetChestWildCardName(), n)
  File "/home/ec2-user/Projects/CIP/cip_python/phenotypes/body_composition_phenotypes.py", line 376, in add_pheno_group
    self.add_pheno([chest_region, chest_type], pheno_name, pheno_val)
  File "/home/ec2-user/Projects/CIP/cip_python/phenotypes/phenotypes.py", line 220, in add_pheno
    c.GetChestWildCardName(), "Invalid phenotype name"
AssertionError: Invalid phenotype name

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Ran 1 test in 0.056s

FAILED (failures=1)