/Users/Jorge/Projects/BWH/CIP-Build/CIP-build/CommandLineTools/Testing/bin/CropLungTest "--compare" "/Users/Jorge/Projects/BWH/CIP-Build/CIP-build/Testing/Data/Large/MIDAS_Data/CropLung_LeftLung_Test_ct.nrrd" "/Users/Jorge/Projects/BWH/CIP-Build/CIP-build/CommandLineTools/Testing/Output/CropLung_LeftLung_Test_ct.nrrd" "--compare" "/Users/Jorge/Projects/BWH/CIP-Build/CIP-build/Testing/Data/Large/MIDAS_Data/CropLung_LeftLung_Test_lm.nrrd" "/Users/Jorge/Projects/BWH/CIP-Build/CIP-build/CommandLineTools/Testing/Output/CropLung_LeftLung_Test_lm.nrrd" "ModuleEntryPoint" "-i" "/Users/Jorge/Projects/BWH/CIP/Testing/Data/Input/simple_ct.nrrd" "-l" "/Users/Jorge/Projects/BWH/CIP/Testing/Data/Input/simple_lm.nrrd" "-r" "LeftLung" "-p" "2,2,2" "-m" "0" "-v" "1000" "-o" "/Users/Jorge/Projects/BWH/CIP-Build/CIP-build/CommandLineTools/Testing/Output/CropLung_LeftLung_Test_ct.nrrd" "--opl" "/Users/Jorge/Projects/BWH/CIP-Build/CIP-build/CommandLineTools/Testing/Output/CropLung_LeftLung_Test_lm.nrrd"

Reading CT from file...
Reading label map from file...
Reading label map...
Extracting region and type...
Computing Bounding Box...
0: 1
1: 3
2: 7
3: 9
4: 1
5: 1
0: 0
1: 4
2: 5
3: 10
4: 0
Writing CT cropped image...
Writing cropped label map...
DONE.