CDash : CIP

Site Name: JOnieva-SPL
Build Name: Mavericks 10.9-JOnieva-SharedLibs=OFF (view notes)
Stamp: 20140821-2041-Experimental (related builds)
Time: 2014-08-21T16:42:23 EDT
Type: Experimental

OS Name: Mac OS X
OS Platform: x86_64
OS Release: 10.9.4
OS Version: 13E28
Compiler Version: unknown
CTest version: ctest-3.0.0

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Update
Configure	0	0
Build	0	50
Test	1	0

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Configure (0 errors, 0 warnings)

Start Time: 2014-08-21T16:42:01 EDT
End Time: 2014-08-21T16:42:19 EDT
Configure Command: "/Applications/CMake.app/Contents/bin/cmake" "-GEclipse CDT4 - Unix Makefiles" "/Users/Jorge/cip"
Configure Return Value: 0
Configure Output:

-- Eclipse version is set to 3.6 (Helios). Adjust CMAKE_ECLIPSE_VERSION if this is wrong.
----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
----------- DONE ------------
Authentication Token for user acilws@acil-bwh.org: creib85k9sPYrWzb5LZjkcuojKgcPej5ASKeLAMN
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring CIP
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull
-- Configuring SEM CLI module: RegisterLungAtlas
-- Configuring SEM CLI module: ResampleLabelMap3D
-- Configuring CIP
-- Configuring SEM CLI module: ResampleLabelMap2D
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ScourParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateRegionHistogramsAndParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: TransferFieldDataToFromPointData
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric3D
-- Configuring SEM CLI module: GetTransformationSimilarityMetric2D
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: ReadVidaWriteCIP
-- Configuring SEM CLI module: RegisterLabelMaps3D
-- Configuring SEM CLI module: RegisterLabelMaps2D
-- Configuring SEM CLI module: RegisterCT2D
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/Jorge/Projects/BWH/CIP-Build/CIP-build

View Configure Summary

Build (0 errors, 50 warnings)

Build command: -- -i
Start Time: 2014-08-21T16:42:23 EDT
End Time: 2014-08-21T16:49:35 EDT

View Errors Summary

Build Warnings (50)

Build Log line 5

File: Filtering/vtkFieldData.h Line: 322

[  1%] Building CXX object Utilities/CMakeFiles/CIPUtilities.dir/VTK/vtkGlyph3DWithScaling.cxx.o
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:17:
In file included from /.../VTKv5/Filtering/vtkCellData.h:26:
In file included from /.../VTKv5/Filtering/vtkDataSetAttributes.h:44:

/.../VTKv5/Filtering/vtkFieldData.h:322:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(void GetTuple(const vtkIdType i, double * tuple));
  ^

Build Log line 8

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 11

File: Filtering/vtkFieldData.h Line: 314

/.../VTKv5/Filtering/vtkFieldData.h:314:3: note: previous declaration is here

  VTK_LEGACY(double *GetTuple(const vtkIdType i));
  ^

Build Log line 14

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:17:
In file included from /.../VTKv5/Filtering/vtkCellData.h:26:
In file included from /.../VTKv5/Filtering/vtkDataSetAttributes.h:44:

Build Log line 20

File: Filtering/vtkFieldData.h Line: 330

/.../VTKv5/Filtering/vtkFieldData.h:330:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(void SetTuple(const vtkIdType i, const double * tuple));
  ^

Build Log line 23

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 26

File: Filtering/vtkFieldData.h Line: 322

/.../VTKv5/Filtering/vtkFieldData.h:322:3: note: previous declaration is here

  VTK_LEGACY(void GetTuple(const vtkIdType i, double * tuple));
  ^

Build Log line 29

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:17:
In file included from /.../VTKv5/Filtering/vtkCellData.h:26:
In file included from /.../VTKv5/Filtering/vtkDataSetAttributes.h:44:

Build Log line 35

File: Filtering/vtkFieldData.h Line: 338

/.../VTKv5/Filtering/vtkFieldData.h:338:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(void InsertTuple(const vtkIdType i, const double * tuple));
  ^

Build Log line 38

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 41

File: Filtering/vtkFieldData.h Line: 330

/.../VTKv5/Filtering/vtkFieldData.h:330:3: note: previous declaration is here

  VTK_LEGACY(void SetTuple(const vtkIdType i, const double * tuple));
  ^

Build Log line 44

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:17:
In file included from /.../VTKv5/Filtering/vtkCellData.h:26:
In file included from /.../VTKv5/Filtering/vtkDataSetAttributes.h:44:

Build Log line 50

File: Filtering/vtkFieldData.h Line: 346

/.../VTKv5/Filtering/vtkFieldData.h:346:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(vtkIdType InsertNextTuple(const double * tuple));
  ^

Build Log line 53

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 56

File: Filtering/vtkFieldData.h Line: 338

/.../VTKv5/Filtering/vtkFieldData.h:338:3: note: previous declaration is here

  VTK_LEGACY(void InsertTuple(const vtkIdType i, const double * tuple));
  ^

Build Log line 59

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:17:
In file included from /.../VTKv5/Filtering/vtkCellData.h:26:
In file included from /.../VTKv5/Filtering/vtkDataSetAttributes.h:44:

Build Log line 65

File: Filtering/vtkFieldData.h Line: 354

/.../VTKv5/Filtering/vtkFieldData.h:354:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(double GetComponent(const vtkIdType i, const int j));
  ^

Build Log line 68

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 71

File: Filtering/vtkFieldData.h Line: 346

/.../VTKv5/Filtering/vtkFieldData.h:346:3: note: previous declaration is here

  VTK_LEGACY(vtkIdType InsertNextTuple(const double * tuple));
  ^

Build Log line 74

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:17:
In file included from /.../VTKv5/Filtering/vtkCellData.h:26:
In file included from /.../VTKv5/Filtering/vtkDataSetAttributes.h:44:

Build Log line 80

File: Filtering/vtkFieldData.h Line: 363

/.../VTKv5/Filtering/vtkFieldData.h:363:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(void SetComponent(const vtkIdType i, const int j, const double c));
  ^

Build Log line 83

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 86

File: Filtering/vtkFieldData.h Line: 354

/.../VTKv5/Filtering/vtkFieldData.h:354:3: note: previous declaration is here

  VTK_LEGACY(double GetComponent(const vtkIdType i, const int j));
  ^

Build Log line 89

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:17:
In file included from /.../VTKv5/Filtering/vtkCellData.h:26:
In file included from /.../VTKv5/Filtering/vtkDataSetAttributes.h:44:

Build Log line 95

File: Filtering/vtkFieldData.h Line: 372

/.../VTKv5/Filtering/vtkFieldData.h:372:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(void InsertComponent(const vtkIdType i, const int j, const double c));
  ^

Build Log line 98

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 101

File: Filtering/vtkFieldData.h Line: 363

/.../VTKv5/Filtering/vtkFieldData.h:363:3: note: previous declaration is here

  VTK_LEGACY(void SetComponent(const vtkIdType i, const int j, const double c));
  ^

Build Log line 104

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:23:

Build Log line 108

File: Common/vtkInformation.h Line: 358

/.../VTKv5/Common/vtkInformation.h:358:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(VTK_FILTERING_EXPORT void Append(
  ^

Build Log line 111

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 114

File: Common/vtkInformation.h Line: 353

/.../VTKv5/Common/vtkInformation.h:353:3: note: previous declaration is here

  VTK_LEGACY(VTK_FILTERING_EXPORT void CopyEntry(vtkInformation* from, vtkInformationExecutivePortKey* key, int deep=0));
  ^

Build Log line 117

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:23:

Build Log line 121

File: Common/vtkInformation.h Line: 364

/.../VTKv5/Common/vtkInformation.h:364:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(VTK_FILTERING_EXPORT void AppendUnique(
  ^

Build Log line 124

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 127

File: Common/vtkInformation.h Line: 358

/.../VTKv5/Common/vtkInformation.h:358:3: note: previous declaration is here

  VTK_LEGACY(VTK_FILTERING_EXPORT void Append(
  ^

Build Log line 130

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:23:

Build Log line 134

File: Common/vtkInformation.h Line: 371

/.../VTKv5/Common/vtkInformation.h:371:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(VTK_FILTERING_EXPORT
  ^

Build Log line 137

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 140

File: Common/vtkInformation.h Line: 364

/.../VTKv5/Common/vtkInformation.h:364:3: note: previous declaration is here

  VTK_LEGACY(VTK_FILTERING_EXPORT void AppendUnique(
  ^

Build Log line 143

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:23:

Build Log line 147

File: Common/vtkInformation.h Line: 376

/.../VTKv5/Common/vtkInformation.h:376:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(VTK_FILTERING_EXPORT
  ^

Build Log line 150

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 153

File: Common/vtkInformation.h Line: 371

/.../VTKv5/Common/vtkInformation.h:371:3: note: previous declaration is here

  VTK_LEGACY(VTK_FILTERING_EXPORT
  ^

Build Log line 156

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:23:

Build Log line 160

File: Common/vtkInformation.h Line: 381

/.../VTKv5/Common/vtkInformation.h:381:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(VTK_FILTERING_EXPORT
  ^

Build Log line 163

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^

Build Log line 166

File: Common/vtkInformation.h Line: 376

/.../VTKv5/Common/vtkInformation.h:376:3: note: previous declaration is here

  VTK_LEGACY(VTK_FILTERING_EXPORT
  ^

Build Log line 169

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:23:

Build Log line 173

File: Common/vtkInformation.h Line: 386

/.../VTKv5/Common/vtkInformation.h:386:3: warning: class member cannot be redeclared [-Wredeclared-class-member]

  VTK_LEGACY(VTK_FILTERING_EXPORT
  ^

Build Log line 176

File: Common/vtkSetGet.h Line: 818

/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'

# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
/.../VTKv5/Common/vtkInformation.h:381:3: note: previous declaration is here
  VTK_LEGACY(VTK_FILTERING_EXPORT
  ^
/.../VTKv5/Common/vtkSetGet.h:818:35: note: expanded from macro 'VTK_LEGACY'
# define VTK_LEGACY(method) class vtkLegacyMethodRemoved
                                  ^
In file included from /Users/Jorge/cip/Utilities/VTK/vtkGlyph3DWithScaling.cxx:23:
/.../VTKv5/Common/vtkInformation.h:391:3: warning: class member cannot be redeclared [-Wredeclared-class-member]
The maximum number of reported warnings or errors has been reached!!!

View Warnings Summary

Test (21 passed, 1 failed, 0 not run)

View Tests Summary