Start Time: 2018-11-20T23:01:15 EST End Time: 2018-11-20T23:01:16 EST Update Command: "/Applications/GitHub.app/Contents/Resources/git/bin/git" "fetch" Update Type: GIT Number of Updates: 8
Configure (0 errors, 0 warnings)
Start Time: 2018-11-20T23:01:16 EST End Time: 2018-11-20T23:01:16 EST Configure Command: /Applications/CMake.app/Contents/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/Users/acil-user/Projects/CIP" Configure Return Value: 0 Configure Output:
/.../CIP/Common/cipChestConventions.cxx:406:33: error: no member named 'FissurePhenotypeNames' in 'cip::ChestConventionsStatic'
if (!s_ChestConventions.FissurePhenotypeNames[i].compare(pheno)) {
~~~~~~~~~~~~~~~~~~ ^
4 errors generated.
[ 5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipGeometryTopologyData.cxx.o
ar: CMakeFiles/CIPCommon.dir/cipChestConventions.cxx.o: No such file or directory
[ 9%] Built target CIPCommon
Scanning dependencies of target CIPIO
[ 9%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipLobeSurfaceModelIO.cxx.o
[ 9%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipChestRegionChestTypeLocationsIO.cxx.o
[ 9%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipThinPlateSplineSurfaceIO.cxx.o
[ 10%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipGeometryTopologyDataIO.cxx.o
[ 10%] Linking CXX static library /.../CIP-build/lib/libCIPIO.a
[ 10%] Built target CIPIO
running build_ext
skipping '/.../CIP/cip_python/utils/gco_python/gco_python.cpp' Cython extension (up-to-date)
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 11%] Built target cipHelperTEST
Scanning dependencies of target itkCIPMergeChestLabelMapsImageFilterTEST
[ 11%] Building CXX object Common/Testing/CMakeFiles/itkCIPMergeChestLabelMapsImageFilterTEST.dir/itkCIPMergeChestLabelMapsImageFilterTEST.cxx.o
In file included from /.../CIP/Common/Testing/itkCIPMergeChestLabelMapsImageFilterTEST.cxx:4:
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 12%] Built target itkCIPMergeChestLabelMapsImageFilterTEST
Scanning dependencies of target cipLobeSurfaceModelTEST
[ 12%] Building CXX object Common/Testing/CMakeFiles/cipLobeSurfaceModelTEST.dir/cipLobeSurfaceModelTEST.cxx.o
[ 12%] Linking CXX executable cipLobeSurfaceModelTEST
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
[ 12%] Built target cipLobeSurfaceModelTEST
Scanning dependencies of target cipNelderMeadSimplexOptimizerTEST
[ 12%] Building CXX object Common/Testing/CMakeFiles/cipNelderMeadSimplexOptimizerTEST.dir/cipNelderMeadSimplexOptimizerTEST.cxx.o
[ 13%] Linking CXX executable cipNelderMeadSimplexOptimizerTEST
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
[ 13%] Built target cipNelderMeadSimplexOptimizerTEST
Scanning dependencies of target itkCIPExtractChestLabelMapImageFilterTEST
[ 13%] Building CXX object Common/Testing/CMakeFiles/itkCIPExtractChestLabelMapImageFilterTEST.dir/itkCIPExtractChestLabelMapImageFilterTEST.cxx.o
In file included from /.../CIP/Common/Testing/itkCIPExtractChestLabelMapImageFilterTEST.cxx:3:
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 13%] Built target itkCIPExtractChestLabelMapImageFilterTEST
Scanning dependencies of target cipGeometryTopologyDataIOTEST
[ 13%] Building CXX object IO/Testing/CMakeFiles/cipGeometryTopologyDataIOTEST.dir/cipGeometryTopologyDataIOTEST.cxx.o
[ 13%] Linking CXX executable cipGeometryTopologyDataIOTEST
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 13%] Built target cipGeometryTopologyDataIOTEST
Scanning dependencies of target cipLobeSurfaceModelIOTEST
[ 13%] Building CXX object IO/Testing/CMakeFiles/cipLobeSurfaceModelIOTEST.dir/cipLobeSurfaceModelIOTEST.cxx.o
[ 13%] Linking CXX executable cipLobeSurfaceModelIOTEST
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
[ 13%] Built target cipLobeSurfaceModelIOTEST
Scanning dependencies of target cipChestRegionChestTypeLocationsIOTEST
[ 13%] Building CXX object IO/Testing/CMakeFiles/cipChestRegionChestTypeLocationsIOTEST.dir/cipChestRegionChestTypeLocationsIOTEST.cxx.o
[ 13%] Linking CXX executable cipChestRegionChestTypeLocationsIOTEST
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 13%] Built target cipChestRegionChestTypeLocationsIOTEST
Scanning dependencies of target ExampleCLILib
[ 13%] Building CXX object CommandLineTools/ExampleCLI/CMakeFiles/ExampleCLILib.dir/ExampleCLI.cxx.o
[ 14%] Linking CXX static library ../../bin/libExampleCLILib.a
[ 14%] Built target ExampleCLILib
[ 14%] Linking CXX executable ../../bin/ExampleCLI
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ExampleCLI.xml' along side the executable
[ 14%] Built target ExampleCLI
Scanning dependencies of target ExampleCLITest
[ 14%] Building CXX object CommandLineTools/ExampleCLI/CMakeFiles/ExampleCLITest.dir/Testing/ExampleCLITest.cxx.o
[ 14%] Linking CXX executable ../Testing/bin/ExampleCLITest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 14%] Built target ExampleCLITest
Scanning dependencies of target ConvertDicomLib
[ 14%] Building CXX object CommandLineTools/ConvertDicom/CMakeFiles/ConvertDicomLib.dir/ConvertDicom.cxx.o
[ 14%] Linking CXX static library ../../bin/libConvertDicomLib.a
[ 14%] Built target ConvertDicomLib
[ 14%] Linking CXX executable ../../bin/ConvertDicom
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ConvertDicom.xml' along side the executable
[ 15%] Built target ConvertDicom
Scanning dependencies of target ConvertDicomTest
[ 15%] Building CXX object CommandLineTools/ConvertDicom/CMakeFiles/ConvertDicomTest.dir/Testing/ConvertDicomTest.cxx.o
[ 15%] Linking CXX executable ../Testing/bin/ConvertDicomTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 15%] Built target ConvertDicomTest
Scanning dependencies of target MergeParticleDataSetsLib
[ 16%] Building CXX object CommandLineTools/MergeParticleDataSets/CMakeFiles/MergeParticleDataSetsLib.dir/MergeParticleDataSets.cxx.o
[ 16%] Linking CXX static library ../../bin/libMergeParticleDataSetsLib.a
[ 16%] Built target MergeParticleDataSetsLib
Scanning dependencies of target MergeParticleDataSetsTest
[ 16%] Building CXX object CommandLineTools/MergeParticleDataSets/CMakeFiles/MergeParticleDataSetsTest.dir/Testing/MergeParticleDataSetsTest.cxx.o
[ 16%] Linking CXX executable ../Testing/bin/MergeParticleDataSetsTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'MergeParticleDataSets.xml' along side the executable
[ 16%] Built target MergeParticleDataSets
Scanning dependencies of target RemoveParticlesFromParticlesDataSetLib
[ 16%] Building CXX object CommandLineTools/RemoveParticlesFromParticlesDataSet/CMakeFiles/RemoveParticlesFromParticlesDataSetLib.dir/RemoveParticlesFromParticlesDataSet.cxx.o
[ 16%] Linking CXX static library ../../bin/libRemoveParticlesFromParticlesDataSetLib.a
[ 17%] Built target RemoveParticlesFromParticlesDataSetLib
[ 17%] Linking CXX executable ../../bin/RemoveParticlesFromParticlesDataSet
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'RemoveParticlesFromParticlesDataSet.xml' along side the executable
[ 17%] Built target RemoveParticlesFromParticlesDataSet
Scanning dependencies of target RemoveParticlesFromParticlesDataSetTest
[ 17%] Building CXX object CommandLineTools/RemoveParticlesFromParticlesDataSet/CMakeFiles/RemoveParticlesFromParticlesDataSetTest.dir/Testing/RemoveParticlesFromParticlesDataSetTest.cxx.o
[ 17%] Linking CXX executable ../Testing/bin/RemoveParticlesFromParticlesDataSetTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 17%] Built target RemoveParticlesFromParticlesDataSetTest
Scanning dependencies of target ExtractParticlesFromChestRegionChestTypeLib
[ 17%] Building CXX object CommandLineTools/ExtractParticlesFromChestRegionChestType/CMakeFiles/ExtractParticlesFromChestRegionChestTypeLib.dir/ExtractParticlesFromChestRegionChestType.cxx.o
[ 17%] Linking CXX static library ../../bin/libExtractParticlesFromChestRegionChestTypeLib.a
[ 18%] Built target ExtractParticlesFromChestRegionChestTypeLib
Scanning dependencies of target ExtractParticlesFromChestRegionChestTypeTest
[ 18%] Building CXX object CommandLineTools/ExtractParticlesFromChestRegionChestType/CMakeFiles/ExtractParticlesFromChestRegionChestTypeTest.dir/Testing/ExtractParticlesFromChestRegionChestTypeTest.cxx.o
[ 18%] Linking CXX executable ../Testing/bin/ExtractParticlesFromChestRegionChestTypeTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ExtractParticlesFromChestRegionChestType.xml' along side the executable
[ 18%] Built target ExtractParticlesFromChestRegionChestType
Scanning dependencies of target GenerateOtsuLungCastLib
[ 18%] Building CXX object CommandLineTools/GenerateOtsuLungCast/CMakeFiles/GenerateOtsuLungCastLib.dir/GenerateOtsuLungCast.cxx.o
In file included from /.../CIP/CommandLineTools/GenerateOtsuLungCast/GenerateOtsuLungCast.cxx:16:
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GenerateOtsuLungCast.xml' along side the executable
[ 19%] Built target GenerateOtsuLungCast
Scanning dependencies of target GenerateOtsuLungCastTest
[ 19%] Building CXX object CommandLineTools/GenerateOtsuLungCast/CMakeFiles/GenerateOtsuLungCastTest.dir/Testing/GenerateOtsuLungCastTest.cxx.o
[ 19%] Linking CXX executable ../Testing/bin/GenerateOtsuLungCastTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 19%] Built target GenerateOtsuLungCastTest
Scanning dependencies of target GenerateAtlasConvexHullLib
[ 20%] Building CXX object CommandLineTools/GenerateAtlasConvexHull/CMakeFiles/GenerateAtlasConvexHullLib.dir/GenerateAtlasConvexHull.cxx.o
[ 20%] Linking CXX static library ../../bin/libGenerateAtlasConvexHullLib.a
[ 20%] Built target GenerateAtlasConvexHullLib
[ 20%] Linking CXX executable ../../bin/GenerateAtlasConvexHull
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GenerateAtlasConvexHull.xml' along side the executable
[ 20%] Built target GenerateAtlasConvexHull
Scanning dependencies of target GenerateAtlasConvexHullTest
[ 20%] Building CXX object CommandLineTools/GenerateAtlasConvexHull/CMakeFiles/GenerateAtlasConvexHullTest.dir/Testing/GenerateAtlasConvexHullTest.cxx.o
[ 20%] Linking CXX executable ../Testing/bin/GenerateAtlasConvexHullTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 20%] Built target GenerateAtlasConvexHullTest
Scanning dependencies of target RegisterLungAtlasLib
[ 20%] Building CXX object CommandLineTools/RegisterLungAtlas/CMakeFiles/RegisterLungAtlasLib.dir/RegisterLungAtlas.cxx.o
[ 21%] Linking CXX static library ../../bin/libRegisterLungAtlasLib.a
[ 21%] Built target RegisterLungAtlasLib
[ 21%] Linking CXX executable ../../bin/RegisterLungAtlas
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'RegisterLungAtlas.xml' along side the executable
[ 21%] Built target RegisterLungAtlas
Scanning dependencies of target RegisterLungAtlasTest
[ 21%] Building CXX object CommandLineTools/RegisterLungAtlas/CMakeFiles/RegisterLungAtlasTest.dir/Testing/RegisterLungAtlasTest.cxx.o
[ 21%] Linking CXX executable ../Testing/bin/RegisterLungAtlasTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 21%] Built target RegisterLungAtlasTest
Scanning dependencies of target ResampleLabelMapLib
[ 21%] Building CXX object CommandLineTools/ResampleLabelMap/CMakeFiles/ResampleLabelMapLib.dir/ResampleLabelMap.cxx.o
[ 21%] Linking CXX static library ../../bin/libResampleLabelMapLib.a
[ 21%] Built target ResampleLabelMapLib
Scanning dependencies of target ResampleLabelMapTest
[ 21%] Building CXX object CommandLineTools/ResampleLabelMap/CMakeFiles/ResampleLabelMapTest.dir/Testing/ResampleLabelMapTest.cxx.o
[ 21%] Linking CXX executable ../Testing/bin/ResampleLabelMapTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ResampleCT.xml' along side the executable
[ 24%] Built target ResampleCT
Scanning dependencies of target QualityControlLib
[ 24%] Building CXX object CommandLineTools/QualityControl/CMakeFiles/QualityControlLib.dir/QualityControl.cxx.o
[ 24%] Linking CXX static library ../../bin/libQualityControlLib.a
[ 25%] Built target QualityControlLib
[ 25%] Linking CXX executable ../../bin/QualityControl
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'QualityControl.xml' along side the executable
[ 25%] Built target QualityControl
Scanning dependencies of target QualityControlTest
[ 25%] Building CXX object CommandLineTools/QualityControl/CMakeFiles/QualityControlTest.dir/Testing/QualityControlTest.cxx.o
[ 25%] Linking CXX executable ../Testing/bin/QualityControlTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 25%] Built target QualityControlTest
Scanning dependencies of target RemoveChestTypeFromLabelMapUsingParticlesLib
[ 26%] Building CXX object CommandLineTools/RemoveChestTypeFromLabelMapUsingParticles/CMakeFiles/RemoveChestTypeFromLabelMapUsingParticlesLib.dir/RemoveChestTypeFromLabelMapUsingParticles.cxx.o
[ 26%] Linking CXX static library ../../bin/libRemoveChestTypeFromLabelMapUsingParticlesLib.a
[ 26%] Built target RemoveChestTypeFromLabelMapUsingParticlesLib
Scanning dependencies of target RemoveChestTypeFromLabelMapUsingParticlesTest
[ 26%] Building CXX object CommandLineTools/RemoveChestTypeFromLabelMapUsingParticles/CMakeFiles/RemoveChestTypeFromLabelMapUsingParticlesTest.dir/Testing/RemoveChestTypeFromLabelMapUsingParticlesTest.cxx.o
[ 26%] Linking CXX executable ../Testing/bin/RemoveChestTypeFromLabelMapUsingParticlesTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'RemoveChestTypeFromLabelMapUsingParticles.xml' along side the executable
[ 26%] Built target RemoveChestTypeFromLabelMapUsingParticles
Scanning dependencies of target SegmentLungLobesLib
[ 26%] Building CXX object CommandLineTools/SegmentLungLobes/CMakeFiles/SegmentLungLobesLib.dir/SegmentLungLobes.cxx.o
In file included from /.../CIP/CommandLineTools/SegmentLungLobes/SegmentLungLobes.cxx:13:
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'SegmentLungLobes.xml' along side the executable
[ 27%] Built target SegmentLungLobes
Scanning dependencies of target SegmentLungLobesTest
[ 27%] Building CXX object CommandLineTools/SegmentLungLobes/CMakeFiles/SegmentLungLobesTest.dir/Testing/SegmentLungLobesTest.cxx.o
[ 27%] Linking CXX executable ../Testing/bin/SegmentLungLobesTest
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 27%] Built target SegmentLungLobesTest
Scanning dependencies of target ReadDicomWriteTagsLib
[ 27%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTagsLib.dir/ReadDicomWriteTags.cxx.o
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'ReadDicomWriteTags.xml' along side the executable
[ 28%] Built target ReadDicomWriteTags
Scanning dependencies of target ReadDicomWriteTagsTest
[ 28%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTagsTest.dir/Testing/ReadDicomWriteTagsTest.cxx.o
[ 28%] Linking CXX executable ../Testing/bin/ReadDicomWriteTagsTest
The maximum number of reported warnings or errors has been reached!!!
CMake Deprecation Warning at CMakeLists.txt:42 (cmake_policy):
The OLD behavior for policy CMP0054 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Warning (dev) at CMakeLists.txt:142 (find_package):
Policy CMP0074 is not set: find_package uses <PackageName>_ROOT variables.
Run "cmake --help-policy CMP0074" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
CMake variable ZLIB_ROOT is set to:
/.../CIP-build/zlib-install
For compatibility, CMake is ignoring the variable.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at CMakeLists.txt:555 (install):
Policy CMP0062 is not set: Disallow install() of export() result. Run
"cmake --help-policy CMP0062" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The file
/.../CIP-build/teem-build/TeemLibraryDepends.cmake
was generated by the export() command. It should not be installed with the
install() command. Use the install(EXPORT) mechanism instead. See the
cmake-packages(7) manual for more.
This warning is for project developers. Use -Wno-dev to suppress it.
-- Configuring done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake
--help-policy CMP0042" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
MACOSX_RPATH is not specified for the following targets:
teem
-- Generating done
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Deprecation Warning at Modules/ThirdParty/VNL/src/vxl/CMakeLists.txt:28 (cmake_policy):
The OLD behavior for policy CMP0033 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Warning (dev) at Modules/ThirdParty/VNL/src/vxl/config/cmake/Modules/FindZLIB.cmake:20 (find_package):
Policy CMP0074 is not set: find_package uses <PackageName>_ROOT variables.
Run "cmake --help-policy CMP0074" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
CMake variable ZLIB_ROOT is set to:
/.../CIP-build/zlib-install
For compatibility, CMake is ignoring the variable.
Call Stack (most recent call first):
Modules/ThirdParty/VNL/src/vxl/v3p/CMakeLists.txt:19 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Performing Test ITK_PRIVATE_DYNAMIC_CAST - Failed
CMake Warning (dev) at Modules/ThirdParty/ZLIB/CMakeLists.txt:8 (find_package):
Policy CMP0074 is not set: find_package uses <PackageName>_ROOT variables.
Run "cmake --help-policy CMP0074" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
CMake variable ZLIB_ROOT is set to:
/.../CIP-build/zlib-install
For compatibility, CMake is ignoring the variable.
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found ZLIB: /.../CIP-build/zlib-install/lib/libzlib.a (found version "1.2.3")
CMake Warning (dev) at Modules/ThirdParty/GDCM/src/gdcm/CMakeLists.txt:401 (find_package):
Policy CMP0074 is not set: find_package uses <PackageName>_ROOT variables.
Run "cmake --help-policy CMP0074" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
CMake variable ZLIB_ROOT is set to:
/.../CIP-build/zlib-install
For compatibility, CMake is ignoring the variable.
This warning is for project developers. Use -Wno-dev to suppress it.
[100%] Built target MGHIO
[100%] Built target MGHIO-all
[ 55%] No install step for 'ITKv4'
[ 56%] Completed 'ITKv4'
[ 61%] Built target ITKv4
[ 73%] Built target CIPPython
[ 75%] Performing update step for 'SlicerExecutionModel'
[ 76%] Performing configure step for 'SlicerExecutionModel'
loading initial cache file /.../CIP-build/SlicerExecutionModel-prefix/tmp/SlicerExecutionModel-cache-Release.cmake
-- Configuring done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake
--help-policy CMP0042" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
MACOSX_RPATH is not specified for the following targets:
-- Generating done
ModuleDescriptionParser
This warning is for project developers. Use -Wno-dev to suppress it.
C++ Output path: /.../CIP/Common/cipChestConventionsXmlAutoGenerated.h
Python source path: /.../CIP/cip_python/common/chest_conventions_static.py
Python dest binary folder path: /.../CIP-build/CIP-build/cip_python/common/chest_conventions_static.py
[ 2%] Built target generateChestConventions
Scanning dependencies of target CIPCommon
[ 2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipThinPlateSplineSurface.cxx.o
[ 2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipLobeSurfaceModel.cxx.o
[ 2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestRegionChestTypeLocations.cxx.o
[ 2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestDataViewer.cxx.o
In file included from /.../CIP/Common/cipChestDataViewer.cxx:19:
/.../CIP/Utilities/VTK/vtkSuperquadricTensorGlyphFilter.h:55:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/VTK/vtkSuperquadricTensorGlyphFilter.h:76:7: warning: 'RequestData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
int RequestData(vtkInformation *, vtkInformationVector **, vtkInformationVector *);
^
/.../CIP/Utilities/VTK/vtkSuperquadricTensorGlyphFilter.h:77:7: warning: 'RequestInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
int RequestInformation(vtkInformation *, vtkInformationVector **, vtkInformationVector *);
^
/.../CIP/Utilities/VTK/vtkGlyph3DWithScaling.h:101:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/VTK/vtkGlyph3DWithScaling.h:268:24: warning: 'GetMTime' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/VTK/vtkGlyph3DWithScaling.h:274:15: warning: 'RequestData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
virtual int RequestData(vtkInformation *, vtkInformationVector **, vtkInformationVector *);
^
/.../CIP/Utilities/VTK/vtkGlyph3DWithScaling.h:275:15: warning: 'RequestUpdateExtent' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
virtual int RequestUpdateExtent(vtkInformation *, vtkInformationVector **, vtkInformationVector *);
^
/.../CIP/Utilities/VTK/vtkGlyph3DWithScaling.h:276:15: warning: 'FillInputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
virtual int FillInputPortInformation(int, vtkInformation *);
^
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkPolyDataAlgorithm.h:117:7: note: overridden virtual function is here
int FillInputPortInformation(int port, vtkInformation* info) VTK_OVERRIDE;
^
8 warnings generated.
[ 3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/itkCIPMergeChestLabelMapsImageFilter.cxx.o
In file included from /.../CIP/Common/itkCIPMergeChestLabelMapsImageFilter.cxx:4:
/.../CIP/Common/itkCIPMergeChestLabelMapsImageFilter.h:204:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/Common/itkCIPMergeChestLabelMapsImageFilter.cxx:4:
/.../CIP/Common/itkCIPMergeChestLabelMapsImageFilter.h:211:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/cipGeometryTopologyData.cxx:143:11: warning: address of stack memory associated with local variable 'bb' returned [-Wreturn-stack-address]
/.../CIP/Common/cipGeometryTopologyData.cxx:197:11: warning: address of stack memory associated with local variable 'bb' returned [-Wreturn-stack-address]
/.../CIP/Common/cipGeometryTopologyData.cxx:254:11: warning: address of stack memory associated with local variable 'p' returned [-Wreturn-stack-address]
/.../CIP/Common/cipGeometryTopologyData.cxx:290:11: warning: address of stack memory associated with local variable 'p' returned [-Wreturn-stack-address]
return &p;
^
4 warnings generated.
[ 5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx.o
In file included from /.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx:9:
/.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.h:31:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkPolyDataAlgorithm.h:46:8: note: overridden virtual function is here
void PrintSelf(ostream& os, vtkIndent indent) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx:9:
/.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.h:95:7: warning: 'RequestData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
int RequestData(vtkInformation *, vtkInformationVector **, vtkInformationVector *);
^
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkPolyDataAlgorithm.h:103:15: note: overridden virtual function is here
virtual int RequestData(vtkInformation* request,
^
In file included from /.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx:25:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:49:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:51:8: note: overridden virtual function is here
void PrintSelf(ostream& os, vtkIndent indent) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx:25:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:88:7: warning: 'RequestData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:87:15: note: overridden virtual function is here
virtual int RequestData(vtkInformation* request,
^
In file included from /.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx:25:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:93:7: warning: 'FillInputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:101:7: note: overridden virtual function is here
int FillInputPortInformation(int port, vtkInformation* info) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx:25:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:96:7: warning: 'FillOutputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:100:7: note: overridden virtual function is here
int FillOutputPortInformation(int port, vtkInformation* info) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx:28:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostConnectedComponents.h:45:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkGraphAlgorithm.h:56:8: note: overridden virtual function is here
void PrintSelf(ostream& os, vtkIndent indent) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/vtkCIPAirwayParticlesToGenerationLabeledAirwayParticlesFilter.cxx:28:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostConnectedComponents.h:51:7: warning: 'RequestData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
int RequestData(vtkInformation *, vtkInformationVector **, vtkInformationVector *);
^
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkGraphAlgorithm.h:97:15: note: overridden virtual function is here
virtual int RequestData(vtkInformation* request,
^
8 warnings generated.
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipAirwayDataInteractor.cxx.o
In file included from /.../CIP/Common/cipAirwayDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipAirwayDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:49:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:51:8: note: overridden virtual function is here
void PrintSelf(ostream& os, vtkIndent indent) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/cipAirwayDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipAirwayDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:88:7: warning: 'RequestData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:87:15: note: overridden virtual function is here
virtual int RequestData(vtkInformation* request,
^
In file included from /.../CIP/Common/cipAirwayDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipAirwayDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:93:7: warning: 'FillInputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:101:7: note: overridden virtual function is here
int FillInputPortInformation(int port, vtkInformation* info) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/cipAirwayDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipAirwayDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:96:7: warning: 'FillOutputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:100:7: note: overridden virtual function is here
int FillOutputPortInformation(int port, vtkInformation* info) VTK_OVERRIDE;
^
4 warnings generated.
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipVesselDataInteractor.cxx.o
In file included from /.../CIP/Common/cipVesselDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipVesselDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:49:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:51:8: note: overridden virtual function is here
void PrintSelf(ostream& os, vtkIndent indent) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/cipVesselDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipVesselDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:88:7: warning: 'RequestData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:87:15: note: overridden virtual function is here
virtual int RequestData(vtkInformation* request,
^
In file included from /.../CIP/Common/cipVesselDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipVesselDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:93:7: warning: 'FillInputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:101:7: note: overridden virtual function is here
int FillInputPortInformation(int port, vtkInformation* info) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/cipVesselDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipVesselDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:96:7: warning: 'FillOutputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:100:7: note: overridden virtual function is here
int FillOutputPortInformation(int port, vtkInformation* info) VTK_OVERRIDE;
^
4 warnings generated.
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipFissureDataInteractor.cxx.o
In file included from /.../CIP/Common/cipFissureDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipFissureDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:49:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:51:8: note: overridden virtual function is here
void PrintSelf(ostream& os, vtkIndent indent) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/cipFissureDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipFissureDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:88:7: warning: 'RequestData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:87:15: note: overridden virtual function is here
virtual int RequestData(vtkInformation* request,
^
In file included from /.../CIP/Common/cipFissureDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipFissureDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:93:7: warning: 'FillInputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/VTKv8/Common/ExecutionModel/vtkSelectionAlgorithm.h:101:7: note: overridden virtual function is here
int FillInputPortInformation(int port, vtkInformation* info) VTK_OVERRIDE;
^
In file included from /.../CIP/Common/cipFissureDataInteractor.cxx:11:
In file included from /.../CIP/Common/cipFissureDataInteractor.h:20:
/.../CIP-build/VTKv8/Infovis/BoostGraphAlgorithms/vtkBoostKruskalMinimumSpanningTree.h:96:7: warning: 'FillOutputPortInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
[ 10%] Built target CIP_PYTHON
Scanning dependencies of target cipHelperTEST
[ 11%] Building CXX object Common/Testing/CMakeFiles/cipHelperTEST.dir/cipHelperTEST.cxx.o
[ 11%] Linking CXX executable cipHelperTEST
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
/.../CIP/Common/itkCIPMergeChestLabelMapsImageFilter.h:204:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/Common/Testing/itkCIPMergeChestLabelMapsImageFilterTEST.cxx:4:
/.../CIP/Common/itkCIPMergeChestLabelMapsImageFilter.h:211:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:86:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/Testing/itkCIPMergeChestLabelMapsImageFilterTEST.cxx:31:5: note: in instantiation of template class 'itk::CIPExtractChestLabelMapImageFilter<3>' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/Common/Testing/itkCIPMergeChestLabelMapsImageFilterTEST.cxx:3:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:118:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:86:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/Testing/itkCIPExtractChestLabelMapImageFilterTEST.cxx:27:5: note: in instantiation of template class 'itk::CIPExtractChestLabelMapImageFilter<3>' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/Common/Testing/itkCIPExtractChestLabelMapImageFilterTEST.cxx:3:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:118:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
/.../CIP/Common/itkCIPOtsuLungCastImageFilter.h:53:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/GenerateOtsuLungCast/GenerateOtsuLungCast.cxx:67:3: note: in instantiation of template class 'itk::CIPOtsuLungCastImageFilter<itk::Image<short, 3>, itk::Image<unsigned short, 3> >' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/GenerateOtsuLungCast/GenerateOtsuLungCast.cxx:16:
/.../CIP/Common/itkCIPOtsuLungCastImageFilter.h:77:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
/.../CIP/Common/cipLabelMapToLungLobeLabelMapImageFilter.h:154:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/SegmentLungLobes/SegmentLungLobes.cxx:13:
/.../CIP/Common/cipLabelMapToLungLobeLabelMapImageFilter.h:163:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageSource.h:238:16: note: overridden virtual function is here
virtual void GenerateData() ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/SegmentLungLobes/SegmentLungLobes.cxx:13:
In file included from /.../CIP/Common/cipLabelMapToLungLobeLabelMapImageFilter.h:212:
In file included from /.../CIP/Common/cipLabelMapToLungLobeLabelMapImageFilter.txx:9:
/.../CIP/Utilities/ITK/itkSignedMaurerDistanceMapImageFilter.h:125:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/cipLabelMapToLungLobeLabelMapImageFilter.txx:359:3: note: in instantiation of template class 'itk::SignedMaurerDistanceMapImageFilter<itk::Image<float, 2>, itk::Image<float, 2> >' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/SegmentLungLobes/SegmentLungLobes.cxx:13:
In file included from /.../CIP/Common/cipLabelMapToLungLobeLabelMapImageFilter.h:212:
In file included from /.../CIP/Common/cipLabelMapToLungLobeLabelMapImageFilter.txx:9:
/.../CIP/Utilities/ITK/itkSignedMaurerDistanceMapImageFilter.h:126:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
/.../CIP/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:246:28: warning: result of comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]
if ( commaLocation != std::string::npos )
~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~
/.../CIP/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:252:30: warning: result of comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 28%] Built target ReadDicomWriteTagsTest
Scanning dependencies of target SplitLeftLungRightLungLib
[ 28%] Building CXX object CommandLineTools/SplitLeftLungRightLung/CMakeFiles/SplitLeftLungRightLungLib.dir/SplitLeftLungRightLung.cxx.o
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:19:
/.../CIP/Utilities/ITK/itkGraph.h:298:16: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:493:3: note: in instantiation of template class 'itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> >' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkDataObject.h:484:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:20:
In file included from /.../CIP/Utilities/ITK/itkImageToGraphFilter.h:20:
/.../CIP/Utilities/ITK/itkGraphSource.h:125:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkGraphToGraphFilter.h:40:46: note: in instantiation of template class 'itk::GraphSource<itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
class ITK_EXPORT GraphToGraphFilter : public GraphSource<TOutputGraph>
^
/.../CIP/Common/itkCIPDijkstraMinCostPathGraphToGraphFilter.h:22:68: note: in instantiation of template class 'itk::GraphToGraphFilter<itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> >, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
class ITK_EXPORT CIPDijkstraMinCostPathGraphToGraphFilter : public GraphToGraphFilter< TInputGraph, TOutputGraph >
^
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:515:3: note: in instantiation of template class 'itk::CIPDijkstraMinCostPathGraphToGraphFilter<itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> >, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkProcessObject.h:495:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:20:
In file included from /.../CIP/Utilities/ITK/itkImageToGraphFilter.h:20:
/.../CIP/Utilities/ITK/itkGraphSource.h:130:8: warning: 'GenerateInputRequestedRegion' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkProcessObject.h:716:16: note: overridden virtual function is here
virtual void GenerateInputRequestedRegion();
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:22:
/.../CIP/Common/itkCIPDijkstraMinCostPathGraphToGraphFilter.h:61:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:515:3: note: in instantiation of template class 'itk::CIPDijkstraMinCostPathGraphToGraphFilter<itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> >, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:90:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:63:4: note: in instantiation of template class 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:133:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageSource.h:238:16: note: overridden virtual function is here
virtual void GenerateData() ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:20:
In file included from /.../CIP/Utilities/ITK/itkImageToGraphFilter.h:22:
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:169:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:193:10: note: in instantiation of template class 'itk::ImageToGraphFunctor<itk::Image<short, 2>, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
: public ImageToGraphFunctor<TInputImage, TOutputGraph>
^
/.../CIP/Common/itkCIPDijkstraImageToGraphFunctor.h:49:10: note: in instantiation of template class 'itk::DefaultImageToGraphFunctor<itk::Image<short, 2>, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
: public DefaultImageToGraphFunctor<TInputImage, TOutputGraph>
^
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:478:12: note: in instantiation of template class 'itk::CIPDijkstraImageToGraphFunctor<itk::Image<short, 2>, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:107:8: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::FindMinCostPath' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:112:3: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::GenerateData' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:46:15: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::CIPSplitLeftLungRightLungImageFilter' requested here
/.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:63:51: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::New' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkProcessObject.h:495:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:20:
In file included from /.../CIP/Utilities/ITK/itkImageToGraphFilter.h:22:
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:223:16: warning: 'IsPixelANode' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/itkCIPDijkstraImageToGraphFunctor.h:49:10: note: in instantiation of template class 'itk::DefaultImageToGraphFunctor<itk::Image<short, 2>, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
: public DefaultImageToGraphFunctor<TInputImage, TOutputGraph>
^
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:478:12: note: in instantiation of template class 'itk::CIPDijkstraImageToGraphFunctor<itk::Image<short, 2>, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:107:8: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::FindMinCostPath' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:112:3: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::GenerateData' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:46:15: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::CIPSplitLeftLungRightLungImageFilter' requested here
/.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:63:51: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::New' requested here
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:226:26: warning: 'GetEdgeWeight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:228:26: warning: 'GetNodeWeight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:230:16: warning: 'NormalizeGraph' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:235:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:169:8: note: overridden virtual function is here
void PrintSelf( std::ostream& os, Indent indent ) const;
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:21:
/.../CIP/Common/itkCIPDijkstraImageToGraphFunctor.h:82:26: warning: 'GetEdgeWeight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:478:12: note: in instantiation of template class 'itk::CIPDijkstraImageToGraphFunctor<itk::Image<short, 2>, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:107:8: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::FindMinCostPath' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:112:3: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::GenerateData' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:46:15: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::CIPSplitLeftLungRightLungImageFilter' requested here
/.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:63:51: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::New' requested here
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:226:26: note: overridden virtual function is here
virtual EdgeWeightType GetEdgeWeight(IndexType idx1, IndexType idx2 )
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:21:
/.../CIP/Common/itkCIPDijkstraImageToGraphFunctor.h:83:26: warning: 'GetNodeWeight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:228:26: note: overridden virtual function is here
virtual NodeWeightType GetNodeWeight( IndexType idx )
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:21:
/.../CIP/Common/itkCIPDijkstraImageToGraphFunctor.h:84:16: warning: 'IsPixelANode' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:223:16: note: overridden virtual function is here
virtual bool IsPixelANode(IndexType idx)
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:21:
/.../CIP/Common/itkCIPDijkstraImageToGraphFunctor.h:85:16: warning: 'NormalizeGraph' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:230:16: note: overridden virtual function is here
virtual void NormalizeGraph( NodeImageType *im, OutputGraphType *g ) {}
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:21:
/.../CIP/Common/itkCIPDijkstraImageToGraphFunctor.h:153:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkDefaultImageToGraphFunctor.h:235:8: note: overridden virtual function is here
void PrintSelf(std::ostream& os, Indent indent) const
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:20:
/.../CIP/Utilities/ITK/itkImageToGraphFilter.h:53:24: warning: 'MakeOutput' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
DataObject::Pointer MakeOutput( unsigned int idx );
^
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:486:12: note: in instantiation of template class 'itk::ImageToGraphFilter<itk::Image<short, 2>, itk::Graph<itk::CIPDijkstraGraphTraits<unsigned long, 2> > >' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.txx:107:8: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::FindMinCostPath' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:112:3: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::GenerateData' requested here
/.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:46:15: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::CIPSplitLeftLungRightLungImageFilter' requested here
/.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:63:51: note: in instantiation of member function 'itk::CIPSplitLeftLungRightLungImageFilter<itk::Image<short, 3> >::New' requested here
/.../CIP/Utilities/ITK/itkGraphSource.h:120:29: note: overridden virtual function is here
virtual DataObjectPointer MakeOutput( unsigned int idx );
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:20:
/.../CIP/Utilities/ITK/itkImageToGraphFilter.h:96:8: warning: 'GenerateOutputInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkProcessObject.h:741:16: note: overridden virtual function is here
virtual void GenerateOutputInformation();
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:20:
/.../CIP/Utilities/ITK/itkImageToGraphFilter.h:101:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/Utilities/ITK/itkGraphSource.h:125:8: note: overridden virtual function is here
void PrintSelf( std::ostream& os, Indent indent ) const;
^
In file included from /.../CIP/CommandLineTools/SplitLeftLungRightLung/SplitLeftLungRightLung.cxx:20:
In file included from /.../CIP/Common/itkCIPSplitLeftLungRightLungImageFilter.h:20:
/.../CIP/Utilities/ITK/itkImageToGraphFilter.h:103:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'SplitLeftLungRightLung.xml' along side the executable
[ 29%] Built target SplitLeftLungRightLung
Scanning dependencies of target SplitLeftLungRightLungTest
[ 29%] Building CXX object CommandLineTools/SplitLeftLungRightLung/CMakeFiles/SplitLeftLungRightLungTest.dir/Testing/SplitLeftLungRightLungTest.cxx.o
[ 30%] Linking CXX executable ../Testing/bin/SplitLeftLungRightLungTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 30%] Built target SplitLeftLungRightLungTest
Scanning dependencies of target ExtractChestLabelMapLib
[ 31%] Building CXX object CommandLineTools/ExtractChestLabelMap/CMakeFiles/ExtractChestLabelMapLib.dir/ExtractChestLabelMap.cxx.o
In file included from /.../CIP/CommandLineTools/ExtractChestLabelMap/ExtractChestLabelMap.cxx:12:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:86:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/ExtractChestLabelMap/ExtractChestLabelMap.cxx:43:3: note: in instantiation of template class 'itk::CIPExtractChestLabelMapImageFilter<3>' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/ExtractChestLabelMap/ExtractChestLabelMap.cxx:12:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:118:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 31%] Built target ExtractChestLabelMapTest
[ 31%] Linking CXX executable ../../bin/ExtractChestLabelMap
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ExtractChestLabelMap.xml' along side the executable
[ 31%] Built target ExtractChestLabelMap
Scanning dependencies of target LabelParticlesByChestRegionChestTypeLib
[ 31%] Building CXX object CommandLineTools/LabelParticlesByChestRegionChestType/CMakeFiles/LabelParticlesByChestRegionChestTypeLib.dir/LabelParticlesByChestRegionChestType.cxx.o
[ 32%] Linking CXX static library ../../bin/libLabelParticlesByChestRegionChestTypeLib.a
[ 32%] Built target LabelParticlesByChestRegionChestTypeLib
Scanning dependencies of target LabelParticlesByChestRegionChestTypeTest
[ 32%] Building CXX object CommandLineTools/LabelParticlesByChestRegionChestType/CMakeFiles/LabelParticlesByChestRegionChestTypeTest.dir/Testing/LabelParticlesByChestRegionChestTypeTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 32%] Built target LabelParticlesByChestRegionChestTypeTest
[ 32%] Linking CXX executable ../../bin/LabelParticlesByChestRegionChestType
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'LabelParticlesByChestRegionChestType.xml' along side the executable
[ 32%] Built target LabelParticlesByChestRegionChestType
Scanning dependencies of target GenerateStenciledLabelMapFromParticlesLib
[ 32%] Building CXX object CommandLineTools/GenerateStenciledLabelMapFromParticles/CMakeFiles/GenerateStenciledLabelMapFromParticlesLib.dir/GenerateStenciledLabelMapFromParticles.cxx.o
In file included from /.../CIP/CommandLineTools/GenerateStenciledLabelMapFromParticles/GenerateStenciledLabelMapFromParticles.cxx:15:
/.../CIP/Common/cipParticlesToStenciledLabelMapImageFilter.h:62:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/GenerateStenciledLabelMapFromParticles/GenerateStenciledLabelMapFromParticles.cxx:67:3: note: in instantiation of template class 'cipParticlesToStenciledLabelMapImageFilter<itk::Image<unsigned short, 3> >' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/GenerateStenciledLabelMapFromParticles/GenerateStenciledLabelMapFromParticles.cxx:15:
/.../CIP/Common/cipParticlesToStenciledLabelMapImageFilter.h:67:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 32%] Built target GenerateStenciledLabelMapFromParticlesTest
[ 33%] Linking CXX executable ../../bin/GenerateStenciledLabelMapFromParticles
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GenerateStenciledLabelMapFromParticles.xml' along side the executable
[ 33%] Built target GenerateStenciledLabelMapFromParticles
Scanning dependencies of target GenerateDistanceMapFromLabelMapLib
[ 34%] Building CXX object CommandLineTools/GenerateDistanceMapFromLabelMap/CMakeFiles/GenerateDistanceMapFromLabelMapLib.dir/GenerateDistanceMapFromLabelMap.cxx.o
In file included from /.../CIP/CommandLineTools/GenerateDistanceMapFromLabelMap/GenerateDistanceMapFromLabelMap.cxx:14:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:86:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/GenerateDistanceMapFromLabelMap/GenerateDistanceMapFromLabelMap.cxx:182:3: note: in instantiation of template class 'itk::CIPExtractChestLabelMapImageFilter<3>' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/GenerateDistanceMapFromLabelMap/GenerateDistanceMapFromLabelMap.cxx:14:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:118:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 34%] Built target GenerateDistanceMapFromLabelMapTest
[ 34%] Linking CXX executable ../../bin/GenerateDistanceMapFromLabelMap
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GenerateDistanceMapFromLabelMap.xml' along side the executable
[ 34%] Built target GenerateDistanceMapFromLabelMap
Scanning dependencies of target FilterVesselParticleDataLib
[ 34%] Building CXX object CommandLineTools/FilterVesselParticleData/CMakeFiles/FilterVesselParticleDataLib.dir/FilterVesselParticleData.cxx.o
[ 34%] Linking CXX static library ../../bin/libFilterVesselParticleDataLib.a
[ 34%] Built target FilterVesselParticleDataLib
Scanning dependencies of target FilterVesselParticleDataTest
[ 35%] Building CXX object CommandLineTools/FilterVesselParticleData/CMakeFiles/FilterVesselParticleDataTest.dir/Testing/FilterVesselParticleDataTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 35%] Built target FilterVesselParticleDataTest
[ 35%] Linking CXX executable ../../bin/FilterVesselParticleData
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'FilterVesselParticleData.xml' along side the executable
[ 35%] Built target FilterVesselParticleData
Scanning dependencies of target FilterAirwayParticleDataLib
[ 35%] Building CXX object CommandLineTools/FilterAirwayParticleData/CMakeFiles/FilterAirwayParticleDataLib.dir/FilterAirwayParticleData.cxx.o
[ 35%] Linking CXX static library ../../bin/libFilterAirwayParticleDataLib.a
[ 36%] Built target FilterAirwayParticleDataLib
[ 36%] Linking CXX executable ../../bin/FilterAirwayParticleData
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'FilterAirwayParticleData.xml' along side the executable
[ 36%] Built target FilterAirwayParticleData
Scanning dependencies of target FilterAirwayParticleDataTest
[ 36%] Building CXX object CommandLineTools/FilterAirwayParticleData/CMakeFiles/FilterAirwayParticleDataTest.dir/Testing/FilterAirwayParticleDataTest.cxx.o
[ 36%] Linking CXX executable ../Testing/bin/FilterAirwayParticleDataTest
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 36%] Built target FilterAirwayParticleDataTest
Scanning dependencies of target ReadNRRDsWriteVTKLib
[ 36%] Building CXX object CommandLineTools/ReadNRRDsWriteVTK/CMakeFiles/ReadNRRDsWriteVTKLib.dir/ReadNRRDsWriteVTK.cxx.o
[ 36%] Linking CXX static library ../../bin/libReadNRRDsWriteVTKLib.a
[ 36%] Built target ReadNRRDsWriteVTKLib
Scanning dependencies of target ReadNRRDsWriteVTKTest
[ 36%] Building CXX object CommandLineTools/ReadNRRDsWriteVTK/CMakeFiles/ReadNRRDsWriteVTKTest.dir/Testing/ReadNRRDsWriteVTKTest.cxx.o
[ 36%] Linking CXX executable ../Testing/bin/ReadNRRDsWriteVTKTest
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 36%] Built target ReadNRRDsWriteVTKTest
[ 37%] Linking CXX executable ../../bin/ReadNRRDsWriteVTK
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ReadNRRDsWriteVTK.xml' along side the executable
[ 37%] Built target ReadNRRDsWriteVTK
Scanning dependencies of target ReadVTKWriteNRRDsLib
[ 37%] Building CXX object CommandLineTools/ReadVTKWriteNRRDs/CMakeFiles/ReadVTKWriteNRRDsLib.dir/ReadVTKWriteNRRDs.cxx.o
[ 37%] Linking CXX static library ../../bin/libReadVTKWriteNRRDsLib.a
[ 37%] Built target ReadVTKWriteNRRDsLib
Scanning dependencies of target ReadVTKWriteNRRDsTest
[ 37%] Building CXX object CommandLineTools/ReadVTKWriteNRRDs/CMakeFiles/ReadVTKWriteNRRDsTest.dir/Testing/ReadVTKWriteNRRDsTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 37%] Built target ReadVTKWriteNRRDsTest
[ 37%] Linking CXX executable ../../bin/ReadVTKWriteNRRDs
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ReadVTKWriteNRRDs.xml' along side the executable
[ 38%] Built target ReadVTKWriteNRRDs
Scanning dependencies of target ComputeCrossSectionalAreaLib
[ 39%] Building CXX object CommandLineTools/ComputeCrossSectionalArea/CMakeFiles/ComputeCrossSectionalAreaLib.dir/ComputeCrossSectionalArea.cxx.o
[ 39%] Linking CXX static library ../../bin/libComputeCrossSectionalAreaLib.a
[ 39%] Built target ComputeCrossSectionalAreaLib
Scanning dependencies of target ComputeCrossSectionalAreaTest
[ 39%] Building CXX object CommandLineTools/ComputeCrossSectionalArea/CMakeFiles/ComputeCrossSectionalAreaTest.dir/Testing/ComputeCrossSectionalAreaTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 39%] Built target ComputeCrossSectionalAreaTest
[ 39%] Linking CXX executable ../../bin/ComputeCrossSectionalArea
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ComputeCrossSectionalArea.xml' along side the executable
[ 39%] Built target ComputeCrossSectionalArea
Scanning dependencies of target ComputeIntensityStatisticsLib
[ 39%] Building CXX object CommandLineTools/ComputeIntensityStatistics/CMakeFiles/ComputeIntensityStatisticsLib.dir/ComputeIntensityStatistics.cxx.o
[ 39%] Linking CXX static library ../../bin/libComputeIntensityStatisticsLib.a
[ 40%] Built target ComputeIntensityStatisticsLib
Scanning dependencies of target ComputeIntensityStatisticsTest
[ 40%] Building CXX object CommandLineTools/ComputeIntensityStatistics/CMakeFiles/ComputeIntensityStatisticsTest.dir/Testing/ComputeIntensityStatisticsTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 40%] Built target ComputeIntensityStatisticsTest
[ 40%] Linking CXX executable ../../bin/ComputeIntensityStatistics
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ComputeIntensityStatistics.xml' along side the executable
[ 40%] Built target ComputeIntensityStatistics
Scanning dependencies of target FilterFissureParticleDataLib
[ 40%] Building CXX object CommandLineTools/FilterFissureParticleData/CMakeFiles/FilterFissureParticleDataLib.dir/FilterFissureParticleData.cxx.o
[ 40%] Linking CXX static library ../../bin/libFilterFissureParticleDataLib.a
[ 40%] Built target FilterFissureParticleDataLib
[ 40%] Linking CXX executable ../../bin/FilterFissureParticleData
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'FilterFissureParticleData.xml' along side the executable
[ 40%] Built target FilterFissureParticleData
Scanning dependencies of target FilterFissureParticleDataTest
[ 40%] Building CXX object CommandLineTools/FilterFissureParticleData/CMakeFiles/FilterFissureParticleDataTest.dir/Testing/FilterFissureParticleDataTest.cxx.o
[ 41%] Linking CXX executable ../Testing/bin/FilterFissureParticleDataTest
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 41%] Built target FilterFissureParticleDataTest
Scanning dependencies of target GenerateLobeSurfaceModelsHelper
[ 41%] Building CXX object CommandLineTools/GenerateLobeSurfaceModels/CMakeFiles/GenerateLobeSurfaceModelsHelper.dir/GenerateLobeSurfaceModelsHelper.cxx.o
[ 41%] Linking CXX static library /.../CIP-build/lib/libGenerateLobeSurfaceModelsHelper.a
[ 41%] Built target GenerateLobeSurfaceModelsHelper
Scanning dependencies of target GenerateLobeSurfaceModelsLib
[ 41%] Building CXX object CommandLineTools/GenerateLobeSurfaceModels/CMakeFiles/GenerateLobeSurfaceModelsLib.dir/GenerateLobeSurfaceModels.cxx.o
In file included from /.../CIP/CommandLineTools/GenerateLobeSurfaceModels/GenerateLobeSurfaceModels.cxx:46:
In file included from /.../CIP/CommandLineTools/GenerateLobeSurfaceModels/GenerateLobeSurfaceModelsHelper.h:21:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:86:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/GenerateLobeSurfaceModels/GenerateLobeSurfaceModels.cxx:168:3: note: in instantiation of template class 'itk::CIPExtractChestLabelMapImageFilter<3>' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/GenerateLobeSurfaceModels/GenerateLobeSurfaceModels.cxx:46:
In file included from /.../CIP/CommandLineTools/GenerateLobeSurfaceModels/GenerateLobeSurfaceModelsHelper.h:21:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:118:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GenerateLobeSurfaceModels.xml' along side the executable
[ 42%] Built target GenerateLobeSurfaceModels
Scanning dependencies of target GenerateLobeSurfaceModelsTest
[ 42%] Building CXX object CommandLineTools/GenerateLobeSurfaceModels/CMakeFiles/GenerateLobeSurfaceModelsTest.dir/Testing/GenerateLobeSurfaceModelsTest.cxx.o
[ 43%] Linking CXX executable ../Testing/bin/GenerateLobeSurfaceModelsTest
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 43%] Built target GenerateLobeSurfaceModelsTest
Scanning dependencies of target ClassifyFissureParticlesLib
[ 43%] Building CXX object CommandLineTools/ClassifyFissureParticles/CMakeFiles/ClassifyFissureParticlesLib.dir/ClassifyFissureParticles.cxx.o
[ 43%] Linking CXX static library ../../bin/libClassifyFissureParticlesLib.a
[ 43%] Built target ClassifyFissureParticlesLib
Scanning dependencies of target ClassifyFissureParticlesTest
[ 44%] Building CXX object CommandLineTools/ClassifyFissureParticles/CMakeFiles/ClassifyFissureParticlesTest.dir/Testing/ClassifyFissureParticlesTest.cxx.o
[ 44%] Linking CXX executable ../Testing/bin/ClassifyFissureParticlesTest
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 44%] Built target ClassifyFissureParticlesTest
[ 44%] Linking CXX executable ../../bin/ClassifyFissureParticles
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'ClassifyFissureParticles.xml' along side the executable
[ 44%] Built target ClassifyFissureParticles
Scanning dependencies of target CropLungLib
[ 44%] Building CXX object CommandLineTools/CropLung/CMakeFiles/CropLungLib.dir/CropLung.cxx.o
In file included from /.../CIP/CommandLineTools/CropLung/CropLung.cxx:17:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:86:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/CropLung/CropLung.cxx:204:3: note: in instantiation of template class 'itk::CIPExtractChestLabelMapImageFilter<3>' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/CropLung/CropLung.cxx:17:
/.../CIP/Common/itkCIPExtractChestLabelMapImageFilter.h:118:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 45%] Built target CropLungTest
[ 45%] Linking CXX executable ../../bin/CropLung
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'CropLung.xml' along side the executable
[ 45%] Built target CropLung
Scanning dependencies of target GenerateModelLib
[ 45%] Building CXX object CommandLineTools/GenerateModel/CMakeFiles/GenerateModelLib.dir/GenerateModel.cxx.o
In file included from /.../CIP/CommandLineTools/GenerateModel/GenerateModel.cxx:13:
/.../CIP/Utilities/ITK/itkImageToVTKImageFilter.h:88:8: warning: 'Update' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/GenerateModel/GenerateModel.cxx:43:3: note: in instantiation of template class 'itk::ImageToVTKImageFilter<itk::Image<unsigned short, 3> >' requested here
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 46%] Built target GenerateModelTest
[ 46%] Linking CXX executable ../../bin/GenerateModel
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'GenerateModel.xml' along side the executable
[ 46%] Built target GenerateModel
Scanning dependencies of target GenerateImageSubVolumesLib
[ 46%] Building CXX object CommandLineTools/GenerateImageSubVolumes/CMakeFiles/GenerateImageSubVolumesLib.dir/GenerateImageSubVolumes.cxx.o
[ 46%] Linking CXX static library ../../bin/libGenerateImageSubVolumesLib.a
[ 47%] Built target GenerateImageSubVolumesLib
[ 47%] Linking CXX executable ../../bin/GenerateImageSubVolumes
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GenerateImageSubVolumes.xml' along side the executable
[ 47%] Built target GenerateImageSubVolumes
Scanning dependencies of target GenerateImageSubVolumesTest
[ 47%] Building CXX object CommandLineTools/GenerateImageSubVolumes/CMakeFiles/GenerateImageSubVolumesTest.dir/Testing/GenerateImageSubVolumesTest.cxx.o
[ 47%] Linking CXX executable ../Testing/bin/GenerateImageSubVolumesTest
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 47%] Built target GenerateImageSubVolumesTest
Scanning dependencies of target GenerateMedianFilteredImageLib
[ 47%] Building CXX object CommandLineTools/GenerateMedianFilteredImage/CMakeFiles/GenerateMedianFilteredImageLib.dir/GenerateMedianFilteredImage.cxx.o
[ 47%] Linking CXX static library ../../bin/libGenerateMedianFilteredImageLib.a
[ 47%] Built target GenerateMedianFilteredImageLib
[ 47%] Linking CXX executable ../../bin/GenerateMedianFilteredImage
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'GenerateMedianFilteredImage.xml' along side the executable
[ 47%] Built target GenerateMedianFilteredImage
Scanning dependencies of target GenerateMedianFilteredImageTest
[ 48%] Building CXX object CommandLineTools/GenerateMedianFilteredImage/CMakeFiles/GenerateMedianFilteredImageTest.dir/Testing/GenerateMedianFilteredImageTest.cxx.o
[ 48%] Linking CXX executable ../Testing/bin/GenerateMedianFilteredImageTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 48%] Built target GenerateMedianFilteredImageTest
Scanning dependencies of target FindPatchMatchLib
[ 48%] Building CXX object CommandLineTools/FindPatchMatch/CMakeFiles/FindPatchMatchLib.dir/FindPatchMatch.cxx.o
[ 48%] Linking CXX static library ../../bin/libFindPatchMatchLib.a
[ 48%] Built target FindPatchMatchLib
Scanning dependencies of target FindPatchMatchTest
[ 49%] Building CXX object CommandLineTools/FindPatchMatch/CMakeFiles/FindPatchMatchTest.dir/Testing/FindPatchMatchTest.cxx.o
[ 49%] Linking CXX executable ../Testing/bin/FindPatchMatchTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 49%] Built target FindPatchMatchTest
[ 49%] Linking CXX executable ../../bin/FindPatchMatch
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'FindPatchMatch.xml' along side the executable
[ 49%] Built target FindPatchMatch
Scanning dependencies of target TransferRegionAndTypeIndicesToFromPointsLib
[ 49%] Building CXX object CommandLineTools/TransferRegionAndTypeIndicesToFromPoints/CMakeFiles/TransferRegionAndTypeIndicesToFromPointsLib.dir/TransferRegionAndTypeIndicesToFromPoints.cxx.o
[ 49%] Linking CXX static library ../../bin/libTransferRegionAndTypeIndicesToFromPointsLib.a
[ 49%] Built target TransferRegionAndTypeIndicesToFromPointsLib
Scanning dependencies of target TransferRegionAndTypeIndicesToFromPointsTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 50%] Built target TransferRegionAndTypeIndicesToFromPointsTest
[ 50%] Linking CXX executable ../../bin/TransferRegionAndTypeIndicesToFromPoints
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'TransferRegionAndTypeIndicesToFromPoints.xml' along side the executable
[ 50%] Built target TransferRegionAndTypeIndicesToFromPoints
Scanning dependencies of target EvaluateLungLobeSegmentationResultsLib
[ 50%] Building CXX object CommandLineTools/EvaluateLungLobeSegmentationResults/CMakeFiles/EvaluateLungLobeSegmentationResultsLib.dir/EvaluateLungLobeSegmentationResults.cxx.o
[ 50%] Linking CXX static library ../../bin/libEvaluateLungLobeSegmentationResultsLib.a
[ 50%] Built target EvaluateLungLobeSegmentationResultsLib
Scanning dependencies of target EvaluateLungLobeSegmentationResultsTest
[ 51%] Building CXX object CommandLineTools/EvaluateLungLobeSegmentationResults/CMakeFiles/EvaluateLungLobeSegmentationResultsTest.dir/Testing/EvaluateLungLobeSegmentationResultsTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 51%] Built target EvaluateLungLobeSegmentationResultsTest
[ 51%] Linking CXX executable ../../bin/EvaluateLungLobeSegmentationResults
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'EvaluateLungLobeSegmentationResults.xml' along side the executable
[ 51%] Built target EvaluateLungLobeSegmentationResults
Scanning dependencies of target ConvertLabelMapValueToChestRegionChestTypeLib
[ 51%] Building CXX object CommandLineTools/ConvertLabelMapValueToChestRegionChestType/CMakeFiles/ConvertLabelMapValueToChestRegionChestTypeLib.dir/ConvertLabelMapValueToChestRegionChestType.cxx.o
[ 51%] Linking CXX static library ../../bin/libConvertLabelMapValueToChestRegionChestTypeLib.a
[ 51%] Built target ConvertLabelMapValueToChestRegionChestTypeLib
Scanning dependencies of target ConvertLabelMapValueToChestRegionChestTypeTest
[ 51%] Building CXX object CommandLineTools/ConvertLabelMapValueToChestRegionChestType/CMakeFiles/ConvertLabelMapValueToChestRegionChestTypeTest.dir/Testing/ConvertLabelMapValueToChestRegionChestTypeTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 52%] Built target ConvertLabelMapValueToChestRegionChestTypeTest
[ 52%] Linking CXX executable ../../bin/ConvertLabelMapValueToChestRegionChestType
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'ConvertLabelMapValueToChestRegionChestType.xml' along side the executable
[ 53%] Built target ConvertLabelMapValueToChestRegionChestType
Scanning dependencies of target GenerateParenchymaPhenotypesLib
[ 54%] Building CXX object CommandLineTools/GenerateParenchymaPhenotypes/CMakeFiles/GenerateParenchymaPhenotypesLib.dir/GenerateParenchymaPhenotypes.cxx.o
[ 54%] Linking CXX static library ../../bin/libGenerateParenchymaPhenotypesLib.a
[ 54%] Built target GenerateParenchymaPhenotypesLib
Scanning dependencies of target GenerateParenchymaPhenotypesTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 54%] Built target GenerateParenchymaPhenotypesTest
[ 54%] Linking CXX executable ../../bin/GenerateParenchymaPhenotypes
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GenerateParenchymaPhenotypes.xml' along side the executable
[ 54%] Built target GenerateParenchymaPhenotypes
Scanning dependencies of target ComputeDistanceMapLib
[ 55%] Building CXX object CommandLineTools/ComputeDistanceMap/CMakeFiles/ComputeDistanceMapLib.dir/ComputeDistanceMap.cxx.o
In file included from /.../CIP/CommandLineTools/ComputeDistanceMap/ComputeDistanceMap.cxx:7:
/.../CIP/Utilities/ITK/itkSignedMaurerDistanceMapImageFilter.h:125:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
/.../CIP/CommandLineTools/ComputeDistanceMap/ComputeDistanceMap.cxx:57:5: note: in instantiation of template class 'itk::SignedMaurerDistanceMapImageFilter<itk::Image<unsigned short, 3>, itk::Image<float, 3> >' requested here
/.../CIP-build/ITKv4/Modules/Core/Common/include/itkImageToImageFilter.h:214:16: note: overridden virtual function is here
virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
^
In file included from /.../CIP/CommandLineTools/ComputeDistanceMap/ComputeDistanceMap.cxx:7:
/.../CIP/Utilities/ITK/itkSignedMaurerDistanceMapImageFilter.h:126:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'ComputeDistanceMap.xml' along side the executable
[ 55%] Built target ComputeDistanceMap
Scanning dependencies of target ComputeDistanceMapTest
[ 55%] Building CXX object CommandLineTools/ComputeDistanceMap/CMakeFiles/ComputeDistanceMapTest.dir/Testing/ComputeDistanceMapTest.cxx.o
[ 55%] Linking CXX executable ../Testing/bin/ComputeDistanceMapTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 55%] Built target ComputeDistanceMapTest
Scanning dependencies of target PerturbParticlesLib
[ 55%] Building CXX object CommandLineTools/PerturbParticles/CMakeFiles/PerturbParticlesLib.dir/PerturbParticles.cxx.o
[ 55%] Linking CXX static library ../../bin/libPerturbParticlesLib.a
[ 56%] Built target PerturbParticlesLib
Scanning dependencies of target PerturbParticlesTest
[ 56%] Building CXX object CommandLineTools/PerturbParticles/CMakeFiles/PerturbParticlesTest.dir/Testing/PerturbParticlesTest.cxx.o
[ 56%] Linking CXX executable ../Testing/bin/PerturbParticlesTest
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 56%] Built target PerturbParticlesTest
[ 56%] Linking CXX executable ../../bin/PerturbParticles
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'PerturbParticles.xml' along side the executable
[ 56%] Built target PerturbParticles
Scanning dependencies of target ReadWriteRegionAndTypePointsLib
[ 56%] Building CXX object CommandLineTools/ReadWriteRegionAndTypePoints/CMakeFiles/ReadWriteRegionAndTypePointsLib.dir/ReadWriteRegionAndTypePoints.cxx.o
[ 56%] Linking CXX static library ../../bin/libReadWriteRegionAndTypePointsLib.a
[ 56%] Built target ReadWriteRegionAndTypePointsLib
[ 56%] Linking CXX executable ../../bin/ReadWriteRegionAndTypePoints
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'ReadWriteRegionAndTypePoints.xml' along side the executable
[ 56%] Built target ReadWriteRegionAndTypePoints
Scanning dependencies of target ReadWriteRegionAndTypePointsTest
[ 57%] Building CXX object CommandLineTools/ReadWriteRegionAndTypePoints/CMakeFiles/ReadWriteRegionAndTypePointsTest.dir/Testing/ReadWriteRegionAndTypePointsTest.cxx.o
[ 57%] Linking CXX executable ../Testing/bin/ReadWriteRegionAndTypePointsTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 57%] Built target ReadWriteRegionAndTypePointsTest
Scanning dependencies of target PerformMorphologicalLib
[ 58%] Building CXX object CommandLineTools/PerformMorphological/CMakeFiles/PerformMorphologicalLib.dir/PerformMorphological.cxx.o
[ 58%] Linking CXX static library ../../bin/libPerformMorphologicalLib.a
[ 58%] Built target PerformMorphologicalLib
Scanning dependencies of target PerformMorphologicalTest
[ 58%] Building CXX object CommandLineTools/PerformMorphological/CMakeFiles/PerformMorphologicalTest.dir/Testing/PerformMorphologicalTest.cxx.o
[ 58%] Linking CXX executable ../Testing/bin/PerformMorphologicalTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 58%] Built target PerformMorphologicalTest
[ 58%] Linking CXX executable ../../bin/PerformMorphological
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: unable to execute command: Segmentation fault: 11
clang: error: linker command failed due to signal (use -v to see invocation)
Copying XML file 'PerformMorphological.xml' along side the executable
[ 58%] Built target PerformMorphological
Scanning dependencies of target GenerateOverlayImagesLib
[ 58%] Building CXX object CommandLineTools/GenerateOverlayImages/CMakeFiles/GenerateOverlayImagesLib.dir/GenerateOverlayImages.cxx.o
[ 59%] Linking CXX static library ../../bin/libGenerateOverlayImagesLib.a
[ 59%] Built target GenerateOverlayImagesLib
Scanning dependencies of target GenerateOverlayImagesTest
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 59%] Built target GenerateOverlayImagesTest
[ 59%] Linking CXX executable ../../bin/GenerateOverlayImages
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GenerateOverlayImages.xml' along side the executable
[ 59%] Built target GenerateOverlayImages
Scanning dependencies of target GetTransformationSimilarityMetricLib
[ 59%] Building CXX object CommandLineTools/GetTransformationSimilarityMetric/CMakeFiles/GetTransformationSimilarityMetricLib.dir/GetTransformationSimilarityMetric.cxx.o
[ 59%] Linking CXX static library ../../bin/libGetTransformationSimilarityMetricLib.a
[ 59%] Built target GetTransformationSimilarityMetricLib
Scanning dependencies of target GetTransformationSimilarityMetricTest
[ 59%] Building CXX object CommandLineTools/GetTransformationSimilarityMetric/CMakeFiles/GetTransformationSimilarityMetricTest.dir/Testing/GetTransformationSimilarityMetricTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 60%] Built target GetTransformationSimilarityMetricTest
[ 60%] Linking CXX executable ../../bin/GetTransformationSimilarityMetric
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GetTransformationSimilarityMetric.xml' along side the executable
[ 61%] Built target GetTransformationSimilarityMetric
Scanning dependencies of target GetTransformationKappa2DLib
[ 61%] Building CXX object CommandLineTools/GetTransformationKappa2D/CMakeFiles/GetTransformationKappa2DLib.dir/GetTransformationKappa2D.cxx.o
[ 61%] Linking CXX static library ../../bin/libGetTransformationKappa2DLib.a
[ 61%] Built target GetTransformationKappa2DLib
Scanning dependencies of target GetTransformationKappa2DTest
[ 62%] Building CXX object CommandLineTools/GetTransformationKappa2D/CMakeFiles/GetTransformationKappa2DTest.dir/Testing/GetTransformationKappa2DTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 62%] Built target GetTransformationKappa2DTest
[ 62%] Linking CXX executable ../../bin/GetTransformationKappa2D
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Copying XML file 'GetTransformationKappa2D.xml' along side the executable
[ 62%] Built target GetTransformationKappa2D
Scanning dependencies of target GetTransformationKappaLib
[ 62%] Building CXX object CommandLineTools/GetTransformationKappa/CMakeFiles/GetTransformationKappaLib.dir/GetTransformationKappa.cxx.o
[ 62%] Linking CXX static library ../../bin/libGetTransformationKappaLib.a
[ 62%] Built target GetTransformationKappaLib
Scanning dependencies of target GetTransformationKappaTest
[ 62%] Building CXX object CommandLineTools/GetTransformationKappa/CMakeFiles/GetTransformationKappaTest.dir/Testing/GetTransformationKappaTest.cxx.o
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[ 62%] Built target GetTransformationKappaTest
[ 63%] Linking CXX executable ../../bin/GetTransformationKappa
ld: warning: text-based stub file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices.tbd and library file /System/Library/Frameworks//ApplicationServices.framework/ApplicationServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//CoreServices.framework/CoreServices.tbd and library file /System/Library/Frameworks//CoreServices.framework/CoreServices are out of sync. Falling back to library file for linking.
ld: warning: text-based stub file /System/Library/Frameworks//Cocoa.framework/Cocoa.tbd and library file /System/Library/Frameworks//Cocoa.framework/Cocoa are out of sync. Falling back to library file for linking.
ld: archive has no table of contents file '/.../CIP-build/lib/libCIPCommon.a' for architecture x86_64
The maximum number of reported warnings or errors has been reached!!!
Show Build Graphs
