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----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
-- Using Infovis Boost
-- Using CYTHON components
----------- DONE ------------
Appending new list
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull
-- Configuring SEM CLI module: RegisterLungAtlas
-- Configuring SEM CLI module: ResampleLabelMap
-- Configuring SEM CLI module: RescaleLabelMap
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ReadVTKWriteNRRDs
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: FindPatchMatch
-- Configuring SEM CLI module: TransferRegionAndTypeIndicesToFromPoints
-- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric
-- Configuring SEM CLI module: GetTransformationKappa2D
-- Configuring SEM CLI module: GetTransformationKappa
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: ReadVidaWriteCIP
-- Configuring SEM CLI module: RegisterLabelMaps
-- Configuring SEM CLI module: RegisterCT
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue
-- Configuring SEM CLI module: FilterConnectedComponents
-- Configuring SEM CLI module: EnhanceFissuresInImage
-- Configuring SEM CLI module: ComputeFissureFeatureVectors
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring SEM CLI module: GenerateLesionSegmentation
-- Configuring SEM CLI module: RemapLabelMap
-- Configuring SEM CLI module: GenerateNLMFilteredImage
-- Configuring SEM CLI module: ComputeAirwayWallFromParticles
-- Configuring SEM CLI module: RegionTypeLocationsToROIVolume
-- Configuring SEM CLI module: ExtractFissureBoundaryFromLobeMap
-- Configuring SEM CLI module: ExecuteSystemCommand
-- Configuring SEM CLI module: GraphCutsOptimization
-- Configuring SEM CLI module: SegmentLungAirways
-- Configuring SEM CLI module: ComputeStrainFromDeformationField
-- Configuring SEM CLI module: ReadParticlesWriteConnectedParticles
-- Configuring SEM CLI module: LabelAirwayParticlesByGeneration
-- Configuring SEM CLI module: GenerateStatisticsForAirwayGenerationLabeling
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/__init__.py
Wrapping GraphCutsOptimization with Python in D:/Projects/CIP-build/CIPPython-install/python.exe and flags /DWIN32 /D_WINDOWS /W3 /GR /EHsc  /bigobj  /bigobj
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/anatomic_structures_manager.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/chest_conventions.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/chest_conventions_static.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/cipChestConventionsXmlParser.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/geometry_topology_data.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/paths.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/tests/test_geometry_topology_data.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/common/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/apply_reader_labels.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/classify_image_subtypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/distance_feature_extractor.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/distance_feature_extractor_from_ROI.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/distance_feature_extractor_from_xmlpoints.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/emphysema_classification.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/get_ct_patch_from_center.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/hist_dist_knn.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/hist_dist_scikit_knn.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/kde_.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/kde_bandwidth.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/kde_histogram_feature_extractor.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/kde_histogram_feature_extractor_from_ROI.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/kde_histogram_feature_extractor_from_xmlpoints.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/lattice_classifier.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/local_histogram.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_apply_reader_labels.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_classify_image_subtypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_distance_feature_extractor.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_distance_feature_extractor_from_ROI.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_distance_feature_extractor_from_xml_points.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_distance_histogram_extractors.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_get_ct_patch_from_center.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_hist_dist_knn.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_hist_dist_scikit_knn.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_kde_histogram_feature_extractor.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_kde_histogram_feature_extractor_from_ROI.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_kde_histogram_feature_extractor_from_xmlpoints.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/classification/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/input_output
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/input_output/image_reader_writer.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/input_output/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/input_output/tests/test_image_reader_writer.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/input_output/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/airway_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/chest_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/diaphragm_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/feature_strength_map.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/fissure_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/multires_airway_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/multires_vessel_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/particle_metrics.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_airway_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_fissure_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_particle_metrics.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_transfer_particles_region_type_values.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_vessel_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/transfer_particles_region_type_values.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/vessel_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/particles/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/airway_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/body_composition_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/bronchiectasis.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/diaphragm_thickness.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/emphysema_severity.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/gas_trapping.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/laa_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/nodule_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/parenchyma_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests/test_body_composition_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests/test_emphysema_severity.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests/test_laa_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests/test_parenchyma_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/vasculature.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/vasculature_phenotypes.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/phenotypes/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/body_composition_qc.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/ct_qc.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/ct_registration_qc.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/lung_segmentation_qc.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/qc_base.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/vasculature_qc.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/xml_points_qc.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/registration
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/registration/cip_registration.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/registration/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/registration/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/anterior_vs_posterior_partition.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/chest_partition.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/chest_partition_manager.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/comput_image_similarity.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/construct_chest_atlas.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/construct_pec_atlas_from_filenames.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/gaussian_rician.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/grid_segmenter.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/lung_splitter.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/nodule_segmenter.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/pectoralis_segmentor.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/register_tobase_get_closest.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/rind_vs_core_partition.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/segment_chest_with_atlas.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/slic_segmenter.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/tests/test_grid_segmenter.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/tests/test_rind_vs_core_partition.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/segmentation/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/anonymize_dicom.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/apply_label_from_classification.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/cluster_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/compute_dice_coefficient.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/convert_labelmap_to_int.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/feature_maps.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/gco_python
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/gco_python/setup.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/gco_python/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/generate_CLIs_description.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/generate_overlay_image.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/geometry_topology_data_extract_slices.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/get_closest_cases.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/get_mi_similarity_vec.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/interpolate_volume.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/locate_cardiac_gating_artifacts.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/locate_CARDIA_gated_artifacts.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/merge_particle_files.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/polynomial_feature_map.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/query_dicom_directories.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/quick_airway_vessel_segmentation.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/read_geometrytopologypoint_write_dataframe.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/read_geometrytopologypoint_write_polydata.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/read_nrrds_write_vtk.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/region_type_parser.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/remap_lm.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_anonymize_dicom.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_compute_dice_coefficient.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_feature_maps.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_read_geometrytopologypoint_write_dataframe.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_read_geometrytopologypoint_write_polydata.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_region_type_parser.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_remap_lm.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_weighted_feature_map_densities.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/WeightedFeatureMapDensity.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/weighted_feature_map_densities.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/utils/__init__.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/visualization
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/visualization/display_particles.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/visualization/display_particles_volume.py
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/visualization/tests
-- Up-to-date: D:/Projects/CIP-build/CIP-build/cip_python/visualization/__init__.py
-- Configuring done
-- Generating done
-- Build files have been written to: D:/Projects/CIP-build/CIP-build

7>99>Embedding manifest...
7>98>Embedding manifest...
7>99>Copying XML file 'FilterFissureParticleData.xml' along side the executable
7>98>Build log was saved at "file://d:\Projects\CIP-build\CIP-build\CommandLineTools\ResampleCT\ResampleCTTest.dir\Release\BuildLog.htm"
7>98>ResampleCTTest - 0 error(s), 0 warning(s)
7>99>Build log was saved at "file://d:\Projects\CIP-build\CIP-build\CommandLineTools\FilterFissureParticleData\FilterFissureParticleData.dir\Release\BuildLog.htm"
7>99>FilterFissureParticleData - 0 error(s), 0 warning(s)
7>100>------ Build started: Project: FilterConnectedComponentsTest, Configuration: Release x64 ------
7>100>Performing Pre-Link Event...
7>100>Linking...

7>100>.\FilterConnectedComponentsTest.dir\Release\FilterConnectedComponentsTest.obj : fatal error LNK1136: invalid or corrupt file

7>100>Build log was saved at "file://d:\Projects\CIP-build\CIP-build\CommandLineTools\FilterConnectedComponents\FilterConnectedComponentsTest.dir\Release\BuildLog.htm"
7>100>FilterConnectedComponentsTest - 1 error(s), 0 warning(s)
7>101>------ Build started: Project: ResampleLabelMap, Configuration: Release x64 ------
7>101>Linking...
7>101>   Creating library D:\Projects\CIP-build\CIP-build\bin\Release\ResampleLabelMap.lib and object D:\Projects\CIP-build\CIP-build\bin\Release\ResampleLabelMap.exp
7>101>Embedding manifest...
7>101>Copying XML file 'ResampleLabelMap.xml' along side the executable
7>101>Build log was saved at "file://d:\Projects\CIP-build\CIP-build\CommandLineTools\ResampleLabelMap\ResampleLabelMap.dir\Release\BuildLog.htm"
7>101>ResampleLabelMap - 0 error(s), 0 warning(s)
7>102>------ Build started: Project: ResampleLabelMapTest, Configuration: Release x64 ------

7>160>------ Build started: Project: ClassifyFissureParticlesTest, Configuration: Release x64 ------
7>160>Compiling...
7>160>ClassifyFissureParticlesTest.cxx
7>160>Performing Pre-Link Event...
7>160>Linking...
7>160>   Creating library D:\Projects\CIP-build\lib\Release\ClassifyFissureParticlesTest.lib and object D:\Projects\CIP-build\lib\Release\ClassifyFissureParticlesTest.exp
7>160>Embedding manifest...
7>160>Build log was saved at "file://d:\Projects\CIP-build\CIP-build\CommandLineTools\ClassifyFissureParticles\ClassifyFissureParticlesTest.dir\Release\BuildLog.htm"
7>160>ClassifyFissureParticlesTest - 0 error(s), 0 warning(s)
7>========== Build: 159 succeeded, 1 failed, 83 up-to-date, 0 skipped ==========

7>Project : error PRJ0019: A tool returned an error code from "Performing build step for 'CIP'"

7>Build log was saved at "file://d:\Projects\CIP-build\CIP.dir\Release\BuildLog.htm"
7>CIP - 2 error(s), 2 warning(s)
8>------ Build started: Project: ALL_BUILD, Configuration: Release x64 ------
8>Building Custom Rule /.../CIP/CMakeLists.txt
8>CMake does not need to re-run because /.../CIP-build/CMakeFiles/generate.stamp is up-to-date.
8>Build log was saved at "file://d:\Projects\CIP-build\ALL_BUILD.dir\Release\BuildLog.htm"
8>ALL_BUILD - 0 error(s), 0 warning(s)
========== Build: 7 succeeded, 1 failed, 2 up-to-date, 0 skipped ==========

6>Completed 'SlicerExecutionModel'
6>Building Custom Rule /.../CIP/CMakeLists.txt
6>CMake does not need to re-run because /.../CIP-build/CMakeFiles/generate.stamp is up-to-date.
6>Build log was saved at "file://d:\Projects\CIP-build\SlicerExecutionModel.dir\Release\BuildLog.htm"
6>SlicerExecutionModel - 0 error(s), 0 warning(s)
5>Microsoft (R) Visual C++ Express Edition Version 9.0.30729.1.
5>Copyright (C) Microsoft Corp 2007. All rights reserved.
5>1>------ Build started: Project: teem, Configuration: Release x64 ------
5>1>Compiling...
5>1>setup.c

5>1>..\teem\src\push\setup.c(279) : warning C4267: '=' : conversion from 'size_t' to 'unsigned int', possible loss of data

5>1>..\teem\src\push\setup.c(381) : warning C4267: '=' : conversion from 'size_t' to 'unsigned int', possible loss of data

5>1>methodsPush.c
5>1>forces.c
5>1>defaultsPush.c
5>1>corePush.c
5>1>binning.c
5>1>action.c
5>1>tensorCoil.c
5>1>scalarCoil.c
5>1>realmethods.c
5>1>methodsCoil.c

5>1>enumsCoil.c
5>1>defaultsCoil.c
5>1>coreCoil.c

5>1>..\teem\src\coil\coreCoil.c(134) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\coil\coreCoil.c(157) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\coil\coreCoil.c(158) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\coil\coreCoil.c(159) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>maximaElf.c
5>1>glyphElf.c
5>1>ESHEstimElf.c

5>1>..\teem\src\elf\ESHEstimElf.c(299) : warning C4244: '*=' : conversion from 'double' to 'float', possible loss of data

5>1>ballStickElf.c
5>1>valid.c

5>1>..\teem\src\bane\valid.c(205) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>trnsf.c

5>1>..\teem\src\bane\trnsf.c(59) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(111) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(112) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(179) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(220) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(293) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(317) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(318) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(455) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(465) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(469) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(470) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\trnsf.c(483) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>Generating Code...
5>1>Compiling...
5>1>trex.c
5>1>scat.c
5>1>rangeBane.c
5>1>methodsBane.c
5>1>measr.c
5>1>inc.c

5>1>..\teem\src\bane\inc.c(59) : warning C4267: 'function' : conversion from 'size_t' to 'unsigned int', possible loss of data

5>1>..\teem\src\bane\inc.c(138) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\inc.c(229) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>hvol.c

5>1>..\teem\src\bane\hvol.c(103) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\hvol.c(104) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\hvol.c(105) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\hvol.c(291) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\hvol.c(292) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\hvol.c(293) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>gkmsTxf.c
5>1>gkmsScat.c
5>1>gkmsPvg.c

5>1>..\teem\src\bane\gkmsPvg.c(141) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>..\teem\src\bane\gkmsPvg.c(142) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>1>gkmsOpac.c
5>1>gkmsMite.c
5>1>gkmsInfo.c
5>1>gkmsHvol.c
5>1>gkmsFlotsam.c
5>1>defaultsBane.c
5>1>clip.c
5>1>shTijk.c
5>1>nrrdTijk.c

5>1>..\teem\src\tijk\nrrdTijk.c(50) : warning C4267: '=' : conversion from 'size_t' to 'unsigned int', possible loss of data

5>1>..\teem\src\tijk\nrrdTijk.c(80) : warning C4267: '=' : conversion from 'size_t' to 'unsigned int', possible loss of data

5>1>..\teem\src\tijk\nrrdTijk.c(110) : warning C4267: '=' : conversion from 'size_t' to 'unsigned int', possible loss of data

5>1>miscTijk.c
5>1>Generating Code...
5>1>Compiling...
5>1>fsTijk.c
5>1>enumsTijk.c
5>1>approxTijk.c
5>1>3dTijk.c
5>1>2dTijk.c
5>1>methodsAlan.c
5>1>enumsAlan.c

5>1>Linking...
5>1>   Creating library D:\Projects\CIP-build\teem-build\bin\Release\teem.lib and object D:\Projects\CIP-build\teem-build\bin\Release\teem.exp
5>1>Embedding manifest...
5>1>Build log was saved at "file://d:\Projects\CIP-build\teem-build\teem.dir\Release\BuildLog.htm"
5>1>teem - 0 error(s), 35 warning(s)
5>2>------ Build started: Project: tend, Configuration: Release x64 ------
5>3>------ Build started: Project: ungantry, Configuration: Release x64 ------
5>3>Compiling...
5>2>Linking...
5>3>ungantry.c

5>3>..\..\..\teem\src\bin\ungantry.c(89) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>3>..\..\..\teem\src\bin\ungantry.c(90) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>3>..\..\..\teem\src\bin\ungantry.c(91) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>3>Linking...
5>2>Embedding manifest...
5>3>Embedding manifest...
5>2>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\tend.dir\Release\BuildLog.htm"
5>2>tend - 0 error(s), 0 warning(s)
5>3>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\ungantry.dir\Release\BuildLog.htm"
5>3>ungantry - 0 error(s), 3 warning(s)
5>4>------ Build started: Project: unu, Configuration: Release x64 ------
5>4>Linking...
5>4>Embedding manifest...

5>4>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\unu.dir\Release\BuildLog.htm"
5>4>unu - 0 error(s), 0 warning(s)
5>5>------ Build started: Project: talkweb, Configuration: Release x64 ------
5>5>Compiling...
5>5>talkweb.c

5>5>..\..\..\teem\src\bin\talkweb.c(115) : warning C4267: '+=' : conversion from 'size_t' to 'unsigned int', possible loss of data

5>5>..\..\..\teem\src\bin\talkweb.c(242) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>5>..\..\..\teem\src\bin\talkweb.c(243) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>5>..\..\..\teem\src\bin\talkweb.c(245) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>5>..\..\..\teem\src\bin\talkweb.c(315) : warning C4267: '+=' : conversion from 'size_t' to 'int', possible loss of data

5>5>..\..\..\teem\src\bin\talkweb.c(318) : warning C4267: '+=' : conversion from 'size_t' to 'int', possible loss of data

5>5>..\..\..\teem\src\bin\talkweb.c(320) : warning C4267: '+=' : conversion from 'size_t' to 'int', possible loss of data

5>5>Linking...
5>6>------ Build started: Project: spots, Configuration: Release x64 ------
5>5>Embedding manifest...
5>6>Compiling...
5>6>spots.c
5>5>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\talkweb.dir\Release\BuildLog.htm"
5>5>talkweb - 0 error(s), 7 warning(s)
5>6>Linking...
5>6>Embedding manifest...
5>6>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\spots.dir\Release\BuildLog.htm"

5>6>spots - 0 error(s), 0 warning(s)
5>7>------ Build started: Project: qbert, Configuration: Release x64 ------
5>7>Compiling...
5>7>qbert.c

5>7>..\..\..\teem\src\bin\qbert.c(56) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>7>..\..\..\teem\src\bin\qbert.c(68) : warning C4244: '=' : conversion from 'size_t' to 'double', possible loss of data

5>7>..\..\..\teem\src\bin\qbert.c(93) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>7>..\..\..\teem\src\bin\qbert.c(157) : warning C4244: '=' : conversion from 'size_t' to 'double', possible loss of data

5>7>..\..\..\teem\src\bin\qbert.c(300) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>7>..\..\..\teem\src\bin\qbert.c(403) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>7>..\..\..\teem\src\bin\qbert.c(415) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>7>..\..\..\teem\src\bin\qbert.c(426) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>7>..\..\..\teem\src\bin\qbert.c(436) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>7>Linking...
5>7>Embedding manifest...
5>7>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\qbert.dir\Release\BuildLog.htm"
5>7>qbert - 0 error(s), 9 warning(s)
5>8>------ Build started: Project: puller, Configuration: Release x64 ------
5>8>Linking...
5>8>Embedding manifest...
5>8>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\puller.dir\Release\BuildLog.htm"
5>8>puller - 0 error(s), 0 warning(s)
5>9>------ Build started: Project: pprobe, Configuration: Release x64 ------

5>10>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\overrgb.dir\Release\BuildLog.htm"
5>10>overrgb - 0 error(s), 0 warning(s)
5>11>------ Build started: Project: nrrdSanity, Configuration: Release x64 ------
5>11>Linking...
5>11>Embedding manifest...
5>11>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\nrrdSanity.dir\Release\BuildLog.htm"
5>11>nrrdSanity - 0 error(s), 0 warning(s)
5>12>------ Build started: Project: ninspect, Configuration: Release x64 ------
5>12>Compiling...
5>12>ninspect.c

5>12>..\..\..\teem\src\bin\ninspect.c(107) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>12>..\..\..\teem\src\bin\ninspect.c(230) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>12>..\..\..\teem\src\bin\ninspect.c(231) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>12>..\..\..\teem\src\bin\ninspect.c(232) : warning C4267: '=' : conversion from 'size_t' to 'int', possible loss of data

5>12>Linking...
5>12>Embedding manifest...
5>12>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\ninspect.dir\Release\BuildLog.htm"
5>12>ninspect - 0 error(s), 4 warning(s)
5>13>------ Build started: Project: mrender, Configuration: Release x64 ------
5>13>Linking...
5>13>Embedding manifest...
5>13>Build log was saved at "file://d:\Projects\CIP-build\teem-build\src\bin\mrender.dir\Release\BuildLog.htm"
5>13>mrender - 0 error(s), 0 warning(s)
5>14>------ Build started: Project: miter, Configuration: Release x64 ------

7>142>ComputeIntensityStatisticsTest.cxx
7>139>Performing Pre-Link Event...
7>139>Linking...
7>139>   Creating library D:\Projects\CIP-build\lib\Release\ComputeStrainFromDeformationFieldTest.lib and object D:\Projects\CIP-build\lib\Release\ComputeStrainFromDeformationFieldTest.exp
7>139>Embedding manifest...
7>139>Build log was saved at "file://d:\Projects\CIP-build\CIP-build\CommandLineTools\ComputeStrainFromDeformationField\ComputeStrainFromDeformationFieldTest.dir\Release\BuildLog.htm"
7>139>ComputeStrainFromDeformationFieldTest - 0 error(s), 0 warning(s)
7>143>------ Build started: Project: cipLobeSurfaceModelTEST, Configuration: Release x64 ------
7>143>Compiling...
7>143>cipLobeSurfaceModelTEST.cxx

7>143>..\..\..\..\CIP\Common\Testing\cipLobeSurfaceModelTEST.cxx(25) : warning C4267: 'initializing' : conversion from 'size_t' to 'unsigned int', possible loss of data

7>143>..\..\..\..\CIP\Common\Testing\cipLobeSurfaceModelTEST.cxx(26) : warning C4267: 'initializing' : conversion from 'size_t' to 'unsigned int', possible loss of data

7>143>Performing Pre-Link Event...
7>143>Linking...
7>143>Embedding manifest...
7>143>Build log was saved at "file://d:\Projects\CIP-build\CIP-build\Common\Testing\cipLobeSurfaceModelTEST.dir\Release\BuildLog.htm"
7>143>cipLobeSurfaceModelTEST - 0 error(s), 2 warning(s)
7>144>------ Build started: Project: ComputeIntensityStatistics, Configuration: Release x64 ------
7>144>Compiling...
7>144>SEMCommandLineLibraryWrapper.cxx
7>144>Linking...
7>144>   Creating library D:\Projects\CIP-build\CIP-build\bin\Release\ComputeIntensityStatistics.lib and object D:\Projects\CIP-build\CIP-build\bin\Release\ComputeIntensityStatistics.exp

*** WARNING non-zero return value in ctest from: C:\Program Files\CMake\bin\cmake.exe

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