[ 99%] Linking CXX shared library ../../lib/libvtkTestingRendering-7.1.dylib
[ 99%] Built target vtkTestingRendering
[ 99%] Linking CXX shared library ../../lib/libvtkViewsInfovis-7.1.dylib
[100%] Built target vtkViewsInfovis
[ 54%] No install step for 'VTKv7'
[ 56%] Completed 'VTKv7'
[ 59%] Built target VTKv7
[ 60%] Performing update step for 'teem'
[ 62%] Performing configure step for 'teem'
loading initial cache file /.../CIP-build/teem-prefix/tmp/teem-cache-Release.cmake
CMake Warning (dev) at CMakeLists.txt:555 (install):
Policy CMP0062 is not set: Disallow install() of export() result. Run
"cmake --help-policy CMP0062" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The file
/.../CIP-build/teem-build/TeemLibraryDepends.cmake
was generated by the export() command. It should not be installed with the
install() command. Use the install(EXPORT) mechanism instead. See the
cmake-packages(7) manual for more.
This warning is for project developers. Use -Wno-dev to suppress it.
-- Configuring done
-- Generating done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake
--help-policy CMP0042" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
MACOSX_RPATH is not specified for the following targets:
teem
This warning is for project developers. Use -Wno-dev to suppress it.
[100%] Built target MGHIO-all
[100%] Built target Strain-all
[ 74%] No install step for 'ITKv4'
[ 75%] Completed 'ITKv4'
[ 79%] Built target ITKv4
[ 80%] Performing update step for 'SlicerExecutionModel'
[ 81%] Performing configure step for 'SlicerExecutionModel'
loading initial cache file /.../CIP-build/SlicerExecutionModel-prefix/tmp/SlicerExecutionModel-cache-Release.cmake
-- Configuring done
-- Generating done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake
--help-policy CMP0042" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
MACOSX_RPATH is not specified for the following targets:
ModuleDescriptionParser
This warning is for project developers. Use -Wno-dev to suppress it.
[ 11%] Linking CXX static library /.../CIP-build/lib/libCIPIO.a
[ 11%] Built target CIPIO
running build_ext
skipping '/.../CIP/cip_python/utils/gco_python/gco_python.cpp' Cython extension (up-to-date)
building 'pygco' extension
/usr/bin/cc -fno-strict-aliasing -I/.../CIP-build/CIPPython-install/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/.../CIP/Utilities/GraphCutsOptimization -I/.../CIP-build/CIPPython-install/lib/python2.7/site-packages/numpy/core/include -I/.../CIP-build/CIPPython-install/include/python2.7 -c /.../CIP/cip_python/utils/gco_python/gco_python.cpp -o build/temp.macosx-10.7-x86_64-2.7/.../CIP/cip_python/utils/gco_python/gco_python.o
In file included from /.../CIP/cip_python/utils/gco_python/gco_python.cpp:449:
In file included from /.../CIP-build/CIPPython-install/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:
In file included from /.../CIP-build/CIPPython-install/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18:
In file included from /.../CIP-build/CIPPython-install/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1809:
/.../CIP-build/CIPPython-install/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it by " \
^
In file included from /.../CIP/cip_python/utils/gco_python/gco_python.cpp:451:
In file included from /.../CIP/Utilities/GraphCutsOptimization/GCoptimization.h:111:
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:366:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:443:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:366:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:443:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:97:3: warning: field 'm_smoothcostFn' will be initialized after field 'm_datacostFn' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:101:3: warning: field 'm_setupDataCostsSwap' will be initialized after field 'm_setupDataCostsExpansion' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:103:3: warning: field 'm_setupSmoothCostsSwap' will be initialized after field 'm_setupSmoothCostsExpansion' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:106:3: warning: field 'm_updateLabelingDataCosts' will be initialized after field 'm_giveSmoothEnergyInternal' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:108:3: warning: field 'm_solveSpecialCases' will be initialized after field 'm_datacostFnDelete' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:110:3: warning: field 'm_smoothcostFnDelete' will be initialized after field 'm_random_label_order' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:112:3: warning: field 'm_verbosity' will be initialized after field 'm_labelingInfoDirty' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:113:3: warning: field 'm_labelingInfoDirty' will be initialized after field 'm_lookupSiteVar' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:114:3: warning: field 'm_lookupSiteVar' will be initialized after field 'm_labeling' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:119:3: warning: field 'm_activeLabelCounts' will be initialized after field 'm_stepsThisCycle' [-Wreorder]
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:591:25: note: in instantiation of member function 'GCoptimization::GreedyIter<GCoptimization::DataCostFnFromArray>::GreedyIter' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:510:13: note: in instantiation of function template specialization 'GCoptimization::solveGreedy<GCoptimization::DataCostFnFromArray>' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:108:40: note: in instantiation of function template specialization 'GCoptimization::solveSpecialCases<GCoptimization::DataCostFnFromArray>' requested here
, m_solveSpecialCases(&GCoptimization::solveSpecialCases<DataCostFnFromArray>)
^
In file included from /.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:4:
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:591:25: note: in instantiation of member function 'GCoptimization::GreedyIter<GCoptimization::DataCostFnFromFunction>::GreedyIter' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:510:13: note: in instantiation of function template specialization 'GCoptimization::solveGreedy<GCoptimization::DataCostFnFromFunction>' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:235:49: note: in instantiation of function template specialization 'GCoptimization::solveSpecialCases<GCoptimization::DataCostFnFromFunction>' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:717:2: note: in instantiation of function template specialization 'GCoptimization::specializeDataCostFunctor<GCoptimization::DataCostFnFromFunction>' requested here
specializeDataCostFunctor(DataCostFnFromFunction(fn));
^
In file included from /.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:4:
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:591:25: note: in instantiation of member function 'GCoptimization::GreedyIter<GCoptimization::DataCostFnFromFunctionExtra>::GreedyIter' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:510:13: note: in instantiation of function template specialization 'GCoptimization::solveGreedy<GCoptimization::DataCostFnFromFunctionExtra>' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:235:49: note: in instantiation of function template specialization 'GCoptimization::solveSpecialCases<GCoptimization::DataCostFnFromFunctionExtra>' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:725:2: note: in instantiation of function template specialization 'GCoptimization::specializeDataCostFunctor<GCoptimization::DataCostFnFromFunctionExtra>' requested here
specializeDataCostFunctor(DataCostFnFromFunctionExtra(fn, extraData));
^
In file included from /.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:4:
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:591:25: note: in instantiation of member function 'GCoptimization::GreedyIter<GCoptimization::DataCostFunctor>::GreedyIter' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:510:13: note: in instantiation of function template specialization 'GCoptimization::solveGreedy<GCoptimization::DataCostFunctor>' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:769:49: note: in instantiation of function template specialization 'GCoptimization::solveSpecialCases<GCoptimization::DataCostFunctor>' requested here
m_solveSpecialCases = &GCoptimization::solveSpecialCases<DataCostFunctor>;
^
In file included from /.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:4:
In file included from /.../CIP/Utilities/GraphCutsOptimization/GCoptimization.h:111:
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:443:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:584:22: note: in instantiation of member function 'Graph<int, int, long long>::process_sink_orphan' requested here
/.../CIP/Utilities/GraphCutsOptimization/energy.h:325:25: note: in instantiation of member function 'Graph<int, int, long long>::maxflow' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:1241:28: note: in instantiation of member function 'Energy<int, int, long long>::minimize' requested here
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:366:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:585:22: note: in instantiation of member function 'Graph<int, int, long long>::process_source_orphan' requested here
/.../CIP/Utilities/GraphCutsOptimization/energy.h:325:25: note: in instantiation of member function 'Graph<int, int, long long>::maxflow' requested here
/.../CIP/Utilities/GraphCutsOptimization/GCoptimization.cpp:1241:28: note: in instantiation of member function 'Energy<int, int, long long>::minimize' requested here
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:366:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:443:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
[ 28%] Built target SegmentLungLobesLib
[ 28%] Linking CXX executable ../../bin/SegmentLungLobes
Copying XML file 'SegmentLungLobes.xml' along side the executable
[ 29%] Built target SegmentLungLobes
Scanning dependencies of target SegmentLungLobesTest
[ 29%] Building CXX object CommandLineTools/SegmentLungLobes/CMakeFiles/SegmentLungLobesTest.dir/Testing/SegmentLungLobesTest.cxx.o
[ 30%] Linking CXX executable ../Testing/bin/SegmentLungLobesTest
[ 30%] Built target SegmentLungLobesTest
Scanning dependencies of target ReadDicomWriteTagsLib
[ 30%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTagsLib.dir/ReadDicomWriteTags.cxx.o
/.../CIP/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:246:28: warning: comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]
if ( commaLocation != std::string::npos )
~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~
/.../CIP/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:252:30: warning: comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]
if ( newlineLocation != std::string::npos )
~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~
2 warnings generated.
[ 30%] Linking CXX static library ../../bin/libReadDicomWriteTagsLib.a
[ 30%] Built target ReadDicomWriteTagsLib
[ 30%] Linking CXX executable ../../bin/ReadDicomWriteTags
Copying XML file 'ReadDicomWriteTags.xml' along side the executable
[ 30%] Built target ReadDicomWriteTags
Scanning dependencies of target ReadDicomWriteTagsTest
[ 31%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTagsTest.dir/Testing/ReadDicomWriteTagsTest.cxx.o
Copying XML file 'ExecuteSystemCommand.xml' along side the executable
[ 94%] Built target ExecuteSystemCommand
Scanning dependencies of target ExecuteSystemCommandTest
[ 95%] Building CXX object CommandLineTools/ExecuteSystemCommand/CMakeFiles/ExecuteSystemCommandTest.dir/Testing/ExecuteSystemCommandTest.cxx.o
[ 95%] Linking CXX executable ../Testing/bin/ExecuteSystemCommandTest
[ 95%] Built target ExecuteSystemCommandTest
Scanning dependencies of target GraphCutsOptimizationLib
[ 96%] Building CXX object CommandLineTools/GraphCutsOptimization/CMakeFiles/GraphCutsOptimizationLib.dir/GraphCutsOptimization.cxx.o
In file included from /.../CIP/CommandLineTools/GraphCutsOptimization/GraphCutsOptimization.cxx:14:
In file included from /.../CIP/Utilities/GraphCutsOptimization/GCoptimization.h:111:
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:366:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
/.../CIP/Utilities/GraphCutsOptimization/maxflow.cpp:443:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
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