Wednesday, August 12 2026 13:20:43
CIP
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Show Build Graphs-- The C compiler identification is GNU 4.8.2 -- The CXX compiler identification is GNU 4.8.2 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done ----------- ENTRY ------------ Configuring Superbuild... -- Found Git: /usr/bin/git (found version "1.8.3.1") -- PRIMARY_PROJECT_NAME_DEPENDENCIES: CIPPython;SlicerExecutionModel;VTKv7;ITKv4;Boost;teem -- SuperBuild - First pass -- SuperBuild - First pass - done -- SuperBuild - CIP => Requires CIPPython[INCLUDED], SlicerExecutionModel, VTKv7, ITKv4, Boost[INCLUDED], teem, -- SuperBuild - SlicerExecutionModel => Requires ITKv4, -- SuperBuild - ITKv4 => Requires zlib, VTKv7, -- SuperBuild - zlib[OK] -- SuperBuild - ZLIB_INCLUDE_DIR:/home/centos/Projects/CIP-build/CIP-build/zlib-install/include -- SuperBuild - ZLIB_LIBRARY:/home/centos/Projects/CIP-build/CIP-build/zlib-install/lib/libzlib.a -- SuperBuild - ZLIB_ROOT:/home/centos/Projects/CIP-build/CIP-build/zlib-install -- SuperBuild - VTKv7 => Requires zlib[INCLUDED], CIPPython[INCLUDED], Boost[INCLUDED], -- SuperBuild - VTKv7[OK] -- SuperBuild - PNG_INCLUDE_DIR:/home/centos/Projects/CIP-build/CIP-build/VTKv7/Utilities/vtkpng -- SuperBuild - PNG_LIBRARY:/home/centos/Projects/CIP-build/CIP-build/VTKv7-build/bin/libvtkpng.so -- SuperBuild - LIBXML_INCLUDE_DIR:/home/centos/Projects/CIP-build/CIP-build/VTKv7/ThirdParty/libxml2/vtklibxml2 -- SuperBuild - ITKv4[OK] -- SuperBuild - SlicerExecutionModel[OK] -- SuperBuild - teem => Requires zlib[INCLUDED], VTKv7[INCLUDED], -- SuperBuild - teem[OK] -- SuperBuild - CIP[OK] ----------- DONE ------------ -- Configuring done -- Generating done -- Build files have been written to: /home/centos/Projects/CIP-build/CIP-build
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateCursor'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderSetPictureClipRectangles'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQuerySubpixelOrder'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindVisualFormat'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeText32'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreeGlyphSet'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFillRectangle'
collect2: error: ld returned 1 exit status
[ 19%] Built target cipHelperTEST Scanning dependencies of target cipLobeSurfaceModelTEST [ 19%] Building CXX object Common/Testing/CMakeFiles/cipLobeSurfaceModelTEST.dir/cipLobeSurfaceModelTEST.cxx.o Linking CXX executable cipLobeSurfaceModelTEST
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
[ 19%] Built target cipLobeSurfaceModelTEST
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateCursor'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderSetPictureClipRectangles'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQuerySubpixelOrder'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindVisualFormat'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeText32'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreeGlyphSet'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFillRectangle'
collect2: error: ld returned 1 exit status
Scanning dependencies of target cipNelderMeadSimplexOptimizerTEST [ 19%] Building CXX object Common/Testing/CMakeFiles/cipNelderMeadSimplexOptimizerTEST.dir/cipNelderMeadSimplexOptimizerTEST.cxx.o Linking CXX executable cipNelderMeadSimplexOptimizerTEST
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite'
[ 19%] Built target cipNelderMeadSimplexOptimizerTEST
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateCursor'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderSetPictureClipRectangles'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQuerySubpixelOrder'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindVisualFormat'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeText32' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreeGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFillRectangle' collect2: error: ld returned 1 exit status Scanning dependencies of target itkCIPExtractChestLabelMapImageFilterTEST [ 19%] Building CXX object Common/Testing/CMakeFiles/itkCIPExtractChestLabelMapImageFilterTEST.dir/itkCIPExtractChestLabelMapImageFilterTEST.cxx.o Linking CXX executable itkCIPExtractChestLabelMapImageFilterTEST The maximum number of reported warnings or errors has been reached!!!View Errors Summary
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/pthread
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/pthread/thread.o
In file included from ./boost/bind/bind.hpp:29:0,
from ./boost/bind.hpp:22,
from ./boost/thread/detail/thread.hpp:29,
from ./boost/thread/thread_only.hpp:22,
from libs/thread/src/pthread/thread.cpp:11:
./boost/bind/arg.hpp: In constructor ‘boost::arg<I>::arg(const T&)’:
./boost/bind/arg.hpp:37:22: warning: typedef ‘T_must_be_placeholder’ locally defined but not used [-Wunused-local-typedefs]
typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
^
In file included from ./boost/tuple/tuple.hpp:33:0,
from ./boost/thread/detail/async_func.hpp:37,
from ./boost/thread/future.hpp:22,
from libs/thread/src/pthread/thread.cpp:19:
./boost/tuple/detail/tuple_basic.hpp: In function ‘typename boost::tuples::access_traits<typename boost::tuples::element<N, boost::tuples::cons<HT, TT> >::type>::const_type boost::tuples::get(const boost::tuples::cons<HT, TT>&)’:
./boost/tuple/detail/tuple_basic.hpp:228:45: warning: typedef ‘cons_element’ locally defined but not used [-Wunused-local-typedefs]
typedef BOOST_DEDUCED_TYPENAME impl::type cons_element;
^
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/pthread/once.o
In file included from ./boost/bind/bind.hpp:29:0,
from ./boost/bind.hpp:22,
from ./boost/thread/pthread/once_atomic.hpp:19,
from ./boost/thread/once.hpp:20,
from libs/thread/src/pthread/./once_atomic.cpp:9,
from libs/thread/src/pthread/once.cpp:8:
./boost/bind/arg.hpp: In constructor ‘boost::arg<I>::arg(const T&)’:./boost/bind/arg.hpp:37:22: warning: typedef ‘T_must_be_placeholder’ locally defined but not used [-Wunused-local-typedefs]
typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
^
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/future.o
gcc.link.dll bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/libboost_thread.so.1.54.0
common.copy /.../CIP-build/Boost-install/lib/libboost_thread.so.1.54.0
ln-UNIX /.../CIP-build/Boost-install/lib/libboost_thread.so
common.mkdir bin.v2/libs/context/build
common.mkdir bin.v2/libs/context/build/gcc-4.8.2
common.mkdir bin.v2/libs/context/build/gcc-4.8.2/release
common.mkdir bin.v2/libs/context/build/gcc-4.8.2/release/link-staticcommon.copy /.../CIP-build/Boost-install/lib/libboost_context.a common.mkdir bin.v2/libs/coroutine common.mkdir bin.v2/libs/coroutine/build common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2 common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2/release common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi/detail gcc.compile.c++ bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi/detail/standard_stack_allocator_posix.o libs/coroutine/src/detail/standard_stack_allocator_posix.cpp: In function ‘rlimit boost::coroutines::detail::stacksize_limit_()’:
libs/coroutine/src/detail/standard_stack_allocator_posix.cpp:61:15: warning: unused variable ‘result’ [-Wunused-variable]
const int result = ::getrlimit( RLIMIT_STACK, & limit);
^
libs/coroutine/src/detail/standard_stack_allocator_posix.cpp: In member function ‘void boost::coroutines::detail::standard_stack_allocator::allocate(boost::coroutines::stack_context&, std::size_t)’:
libs/coroutine/src/detail/standard_stack_allocator_posix.cpp:135:15: warning: unused variable ‘result’ [-Wunused-variable]
const int result( ::mprotect( limit, detail::pagesize(), PROT_NONE) );
^
gcc.compile.c++ bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi/detail/coroutine_context.o
gcc.archive bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi/libboost_coroutine.a
common.copy /.../CIP-build/Boost-install/lib/libboost_coroutine.a
common.mkdir /.../CIP-build/Boost-install/include
common.mkdir /.../CIP-build/Boost-install/include/boost
common.copy /.../CIP-build/Boost-install/include/boost/aligned_storage.hpp
common.copy /.../CIP-build/Boost-install/include/boost/any.hpp
common.copy /.../CIP-build/Boost-install/include/boost/array.hppcommon.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/link-static
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/pthread
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/pthread/thread.o
In file included from ./boost/bind/bind.hpp:29:0,
from ./boost/bind.hpp:22,
from ./boost/thread/detail/thread.hpp:29,
from ./boost/thread/thread_only.hpp:22,
from libs/thread/src/pthread/thread.cpp:11:
./boost/bind/arg.hpp: In constructor ‘boost::arg<I>::arg(const T&)’:
./boost/bind/arg.hpp:37:22: warning: typedef ‘T_must_be_placeholder’ locally defined but not used [-Wunused-local-typedefs]
typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
^
In file included from ./boost/tuple/tuple.hpp:33:0,
from ./boost/thread/detail/async_func.hpp:37,
from ./boost/thread/future.hpp:22,
from libs/thread/src/pthread/thread.cpp:19:
./boost/tuple/detail/tuple_basic.hpp: In function ‘typename boost::tuples::access_traits<typename boost::tuples::element<N, boost::tuples::cons<HT, TT> >::type>::const_type boost::tuples::get(const boost::tuples::cons<HT, TT>&)’:
./boost/tuple/detail/tuple_basic.hpp:228:45: warning: typedef ‘cons_element’ locally defined but not used [-Wunused-local-typedefs]
typedef BOOST_DEDUCED_TYPENAME impl::type cons_element;
^
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/pthread/once.o
In file included from ./boost/bind/bind.hpp:29:0,
from ./boost/bind.hpp:22,
from ./boost/thread/pthread/once_atomic.hpp:19,
from ./boost/thread/once.hpp:20,
from libs/thread/src/pthread/./once_atomic.cpp:9,
from libs/thread/src/pthread/once.cpp:8:
./boost/bind/arg.hpp: In constructor ‘boost::arg<I>::arg(const T&)’:./boost/bind/arg.hpp:37:22: warning: typedef ‘T_must_be_placeholder’ locally defined but not used [-Wunused-local-typedefs]
typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
^
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/future.o
gcc.archive bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/libboost_thread.a
common.copy /.../CIP-build/Boost-install/lib/libboost_thread.a
...updated 10644 targets...
[ 7%] Performing build step for 'Boost'
cmake version 2.8.11
Usage
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadElementBase.cxx.o [ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadGrav.cxx.o [ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadLandmark.cxx.o [ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNoisyLandmark.cxx.o [ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNode.cxx.o [ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadPoint.cxx.o [ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialBase.cxx.o [ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialLinearElasticity.cxx.o [ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMUtility.cxx.o [ 50%] Building C object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/dsrc2c.c.o
cc1: warning: command line option ‘-fvisibility-inlines-hidden’ is valid for C++/ObjC++ but not for C [enabled by default]
Linking CXX shared library ../../../../lib/libITKFEM-4.11.so [ 50%] Built target ITKFEM Scanning dependencies of target ITKFEM-all [ 50%] Built target ITKFEM-all Scanning dependencies of target ITKPDEDeformableRegistration-all [ 50%] Built target ITKPDEDeformableRegistration-all Scanning dependencies of target ITKFEMRegistration-all [ 50%] Built target ITKFEMRegistration-all Scanning dependencies of target gdcmsocketxx [ 50%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Utilities/socketxx/socket++/CMakeFiles/gdcmsocketxx.dir/sockstream.cpp.o
Scanning dependencies of target CIPIO [ 17%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipLobeSurfaceModelIO.cxx.o [ 17%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipChestRegionChestTypeLocationsIO.cxx.o [ 17%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipThinPlateSplineSurfaceIO.cxx.o [ 18%] Building CXX object IO/CMakeFiles/CIPIO.dir/cipGeometryTopologyDataIO.cxx.o Linking CXX static library /.../CIP-build/lib/libCIPIO.a [ 18%] Built target CIPIO Scanning dependencies of target cipHelperTEST [ 19%] Building CXX object Common/Testing/CMakeFiles/cipHelperTEST.dir/cipHelperTEST.cxx.o Linking CXX executable cipHelperTEST
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQuerySubpixelOrder' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindVisualFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeText32' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreeGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFillRectangle' collect2: error: ld returned 1 exit status [ 19%] Built target itkCIPExtractChestLabelMapImageFilterTEST Scanning dependencies of target itkCIPMergeChestLabelMapsImageFilterTEST [ 20%] Building CXX object Common/Testing/CMakeFiles/itkCIPMergeChestLabelMapsImageFilterTEST.dir/itkCIPMergeChestLabelMapsImageFilterTEST.cxx.o Linking CXX executable itkCIPMergeChestLabelMapsImageFilterTEST
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQuerySubpixelOrder' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindVisualFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeText32' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreeGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFillRectangle' collect2: error: ld returned 1 exit status [ 20%] Built target itkCIPMergeChestLabelMapsImageFilterTEST Scanning dependencies of target cipChestRegionChestTypeLocationsIOTEST [ 20%] Building CXX object IO/Testing/CMakeFiles/cipChestRegionChestTypeLocationsIOTEST.dir/cipChestRegionChestTypeLocationsIOTEST.cxx.o Linking CXX executable cipChestRegionChestTypeLocationsIOTEST
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQuerySubpixelOrder' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindVisualFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeText32' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreeGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFillRectangle' collect2: error: ld returned 1 exit status [ 20%] Built target cipChestRegionChestTypeLocationsIOTEST Scanning dependencies of target cipLobeSurfaceModelIOTEST [ 20%] Building CXX object IO/Testing/CMakeFiles/cipLobeSurfaceModelIOTEST.dir/cipLobeSurfaceModelIOTEST.cxx.o Linking CXX executable cipLobeSurfaceModelIOTEST
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ConvertDicom/ConvertDicom.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ConvertDicom/ConvertDicomCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "I/O" has 2 parameters Scanning dependencies of target ConvertDicomLib [ 20%] Building CXX object CommandLineTools/ConvertDicom/CMakeFiles/ConvertDicomLib.dir/ConvertDicom.cxx.o Linking CXX static library ../../bin/libConvertDicomLib.a [ 20%] Built target ConvertDicomLib Scanning dependencies of target ConvertDicom [ 21%] Building CXX object CommandLineTools/ConvertDicom/CMakeFiles/ConvertDicom.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ConvertDicom
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/MergeParticleDataSets/MergeParticleDataSets.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/MergeParticleDataSets/MergeParticleDataSetsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 2 parameters Scanning dependencies of target MergeParticleDataSetsLib [ 22%] Building CXX object CommandLineTools/MergeParticleDataSets/CMakeFiles/MergeParticleDataSetsLib.dir/MergeParticleDataSets.cxx.o Linking CXX static library ../../bin/libMergeParticleDataSetsLib.a [ 22%] Built target MergeParticleDataSetsLib Scanning dependencies of target MergeParticleDataSets [ 22%] Building CXX object CommandLineTools/MergeParticleDataSets/CMakeFiles/MergeParticleDataSets.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/MergeParticleDataSets
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/RemoveParticlesFromParticlesDataSet/RemoveParticlesFromParticlesDataSet.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/RemoveParticlesFromParticlesDataSet/RemoveParticlesFromParticlesDataSetCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 3 parameters Scanning dependencies of target RemoveParticlesFromParticlesDataSetLib [ 22%] Building CXX object CommandLineTools/RemoveParticlesFromParticlesDataSet/CMakeFiles/RemoveParticlesFromParticlesDataSetLib.dir/RemoveParticlesFromParticlesDataSet.cxx.o Linking CXX static library ../../bin/libRemoveParticlesFromParticlesDataSetLib.a [ 22%] Built target RemoveParticlesFromParticlesDataSetLib Scanning dependencies of target RemoveParticlesFromParticlesDataSet [ 23%] Building CXX object CommandLineTools/RemoveParticlesFromParticlesDataSet/CMakeFiles/RemoveParticlesFromParticlesDataSet.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/RemoveParticlesFromParticlesDataSet
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 3 parameters GenerateCLP: Group "" has 2 parameters Scanning dependencies of target ExtractParticlesFromChestRegionChestTypeLib [ 25%] Building CXX object CommandLineTools/ExtractParticlesFromChestRegionChestType/CMakeFiles/ExtractParticlesFromChestRegionChestTypeLib.dir/ExtractParticlesFromChestRegionChestType.cxx.o Linking CXX static library ../../bin/libExtractParticlesFromChestRegionChestTypeLib.a [ 25%] Built target ExtractParticlesFromChestRegionChestTypeLib Scanning dependencies of target ExtractParticlesFromChestRegionChestType [ 25%] Building CXX object CommandLineTools/ExtractParticlesFromChestRegionChestType/CMakeFiles/ExtractParticlesFromChestRegionChestType.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ExtractParticlesFromChestRegionChestType
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "Options" has 4 parameters Scanning dependencies of target GenerateOtsuLungCastLib [ 26%] Building CXX object CommandLineTools/GenerateOtsuLungCast/CMakeFiles/GenerateOtsuLungCastLib.dir/GenerateOtsuLungCast.cxx.o Linking CXX static library ../../bin/libGenerateOtsuLungCastLib.a [ 26%] Built target GenerateOtsuLungCastLib Scanning dependencies of target GenerateOtsuLungCast [ 26%] Building CXX object CommandLineTools/GenerateOtsuLungCast/CMakeFiles/GenerateOtsuLungCast.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateOtsuLungCast
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/GenerateAtlasConvexHull/GenerateAtlasConvexHull.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/GenerateAtlasConvexHull/GenerateAtlasConvexHullCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 7 parameters Scanning dependencies of target GenerateAtlasConvexHullLib [ 27%] Building CXX object CommandLineTools/GenerateAtlasConvexHull/CMakeFiles/GenerateAtlasConvexHullLib.dir/GenerateAtlasConvexHull.cxx.o Linking CXX static library ../../bin/libGenerateAtlasConvexHullLib.a [ 27%] Built target GenerateAtlasConvexHullLib Scanning dependencies of target GenerateAtlasConvexHull [ 27%] Building CXX object CommandLineTools/GenerateAtlasConvexHull/CMakeFiles/GenerateAtlasConvexHull.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateAtlasConvexHull
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 3 parameters GenerateCLP: Group "Parameters" has 2 parameters Scanning dependencies of target RegisterLungAtlasLib [ 28%] Building CXX object CommandLineTools/RegisterLungAtlas/CMakeFiles/RegisterLungAtlasLib.dir/RegisterLungAtlas.cxx.o Linking CXX static library ../../bin/libRegisterLungAtlasLib.a [ 28%] Built target RegisterLungAtlasLib Scanning dependencies of target RegisterLungAtlas [ 28%] Building CXX object CommandLineTools/RegisterLungAtlas/CMakeFiles/RegisterLungAtlas.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/RegisterLungAtlas
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 4 parameters GenerateCLP: Group "Resampling parameters" has 2 parameters Scanning dependencies of target ResampleLabelMapLib [ 28%] Building CXX object CommandLineTools/ResampleLabelMap/CMakeFiles/ResampleLabelMapLib.dir/ResampleLabelMap.cxx.o Linking CXX static library ../../bin/libResampleLabelMapLib.a [ 28%] Built target ResampleLabelMapLib Scanning dependencies of target ResampleLabelMap [ 28%] Building CXX object CommandLineTools/ResampleLabelMap/CMakeFiles/ResampleLabelMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ResampleLabelMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 2 parameters GenerateCLP: Group "Rescaling parameters" has 3 parameters Scanning dependencies of target RescaleLabelMapLib [ 29%] Building CXX object CommandLineTools/RescaleLabelMap/CMakeFiles/RescaleLabelMapLib.dir/RescaleLabelMap.cxx.o Linking CXX static library ../../bin/libRescaleLabelMapLib.a [ 29%] Built target RescaleLabelMapLib Scanning dependencies of target RescaleLabelMap [ 29%] Building CXX object CommandLineTools/RescaleLabelMap/CMakeFiles/RescaleLabelMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/RescaleLabelMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ResampleCT/ResampleCT.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ResampleCT/ResampleCTCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 6 parameters Scanning dependencies of target ResampleCTLib [ 30%] Building CXX object CommandLineTools/ResampleCT/CMakeFiles/ResampleCTLib.dir/ResampleCT.cxx.o Linking CXX static library ../../bin/libResampleCTLib.a [ 30%] Built target ResampleCTLib Scanning dependencies of target ResampleCT [ 30%] Building CXX object CommandLineTools/ResampleCT/CMakeFiles/ResampleCT.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ResampleCT
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/QualityControl/QualityControl.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/QualityControl/QualityControlCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 8 parameters Scanning dependencies of target QualityControlLib [ 31%] Building CXX object CommandLineTools/QualityControl/CMakeFiles/QualityControlLib.dir/QualityControl.cxx.o Linking CXX static library ../../bin/libQualityControlLib.a [ 31%] Built target QualityControlLib Scanning dependencies of target QualityControl [ 32%] Building CXX object CommandLineTools/QualityControl/CMakeFiles/QualityControl.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/QualityControl
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 3 parameters GenerateCLP: Group "Parameters" has 1 parameters Scanning dependencies of target RemoveChestTypeFromLabelMapUsingParticlesLib [ 32%] Building CXX object CommandLineTools/RemoveChestTypeFromLabelMapUsingParticles/CMakeFiles/RemoveChestTypeFromLabelMapUsingParticlesLib.dir/RemoveChestTypeFromLabelMapUsingParticles.cxx.o Linking CXX static library ../../bin/libRemoveChestTypeFromLabelMapUsingParticlesLib.a [ 32%] Built target RemoveChestTypeFromLabelMapUsingParticlesLib Scanning dependencies of target RemoveChestTypeFromLabelMapUsingParticles [ 33%] Building CXX object CommandLineTools/RemoveChestTypeFromLabelMapUsingParticles/CMakeFiles/RemoveChestTypeFromLabelMapUsingParticles.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/RemoveChestTypeFromLabelMapUsingParticles
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Group "Fissure Particles" has 3 parameters GenerateCLP: Group "Region Type Points" has 1 parameters GenerateCLP: Group "Options" has 3 parameters Scanning dependencies of target SegmentLungLobesLib [ 34%] Building CXX object CommandLineTools/SegmentLungLobes/CMakeFiles/SegmentLungLobesLib.dir/SegmentLungLobes.cxx.o Linking CXX static library ../../bin/libSegmentLungLobesLib.a [ 34%] Built target SegmentLungLobesLib Scanning dependencies of target SegmentLungLobes [ 34%] Building CXX object CommandLineTools/SegmentLungLobes/CMakeFiles/SegmentLungLobes.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/SegmentLungLobes
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTagsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 4 parameters Scanning dependencies of target ReadDicomWriteTagsLib [ 34%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTagsLib.dir/ReadDicomWriteTags.cxx.o Linking CXX static library ../../bin/libReadDicomWriteTagsLib.a [ 34%] Built target ReadDicomWriteTagsLib Scanning dependencies of target ReadDicomWriteTags [ 35%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTags.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ReadDicomWriteTags
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 3 parameters GenerateCLP: Group "Parameters" has 3 parameters Scanning dependencies of target SplitLeftLungRightLungLib [ 37%] Building CXX object CommandLineTools/SplitLeftLungRightLung/CMakeFiles/SplitLeftLungRightLungLib.dir/SplitLeftLungRightLung.cxx.o Linking CXX static library ../../bin/libSplitLeftLungRightLungLib.a [ 37%] Built target SplitLeftLungRightLungLib Scanning dependencies of target SplitLeftLungRightLung [ 37%] Building CXX object CommandLineTools/SplitLeftLungRightLung/CMakeFiles/SplitLeftLungRightLung.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/SplitLeftLungRightLung
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "Region Type" has 4 parameters Scanning dependencies of target ExtractChestLabelMapLib [ 38%] Building CXX object CommandLineTools/ExtractChestLabelMap/CMakeFiles/ExtractChestLabelMapLib.dir/ExtractChestLabelMap.cxx.o Linking CXX static library ../../bin/libExtractChestLabelMapLib.a [ 38%] Built target ExtractChestLabelMapLib Scanning dependencies of target ExtractChestLabelMap [ 38%] Building CXX object CommandLineTools/ExtractChestLabelMap/CMakeFiles/ExtractChestLabelMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ExtractChestLabelMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 3 parameters GenerateCLP: Group "Parameters" has 2 parameters Scanning dependencies of target LabelParticlesByChestRegionChestTypeLib [ 39%] Building CXX object CommandLineTools/LabelParticlesByChestRegionChestType/CMakeFiles/LabelParticlesByChestRegionChestTypeLib.dir/LabelParticlesByChestRegionChestType.cxx.o Linking CXX static library ../../bin/libLabelParticlesByChestRegionChestTypeLib.a [ 39%] Built target LabelParticlesByChestRegionChestTypeLib Scanning dependencies of target LabelParticlesByChestRegionChestType [ 39%] Building CXX object CommandLineTools/LabelParticlesByChestRegionChestType/CMakeFiles/LabelParticlesByChestRegionChestType.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/LabelParticlesByChestRegionChestType
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 3 parameters GenerateCLP: Group "Parameters" has 9 parameters Scanning dependencies of target GenerateStenciledLabelMapFromParticlesLib [ 39%] Building CXX object CommandLineTools/GenerateStenciledLabelMapFromParticles/CMakeFiles/GenerateStenciledLabelMapFromParticlesLib.dir/GenerateStenciledLabelMapFromParticles.cxx.o Linking CXX static library ../../bin/libGenerateStenciledLabelMapFromParticlesLib.a [ 39%] Built target GenerateStenciledLabelMapFromParticlesLib Scanning dependencies of target GenerateStenciledLabelMapFromParticles [ 40%] Building CXX object CommandLineTools/GenerateStenciledLabelMapFromParticles/CMakeFiles/GenerateStenciledLabelMapFromParticles.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateStenciledLabelMapFromParticles
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/GenerateDistanceMapFromLabelMap/GenerateDistanceMapFromLabelMap.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/GenerateDistanceMapFromLabelMap/GenerateDistanceMapFromLabelMapCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 6 parameters Scanning dependencies of target GenerateDistanceMapFromLabelMapLib [ 41%] Building CXX object CommandLineTools/GenerateDistanceMapFromLabelMap/CMakeFiles/GenerateDistanceMapFromLabelMapLib.dir/GenerateDistanceMapFromLabelMap.cxx.o Linking CXX static library ../../bin/libGenerateDistanceMapFromLabelMapLib.a [ 41%] Built target GenerateDistanceMapFromLabelMapLib Scanning dependencies of target GenerateDistanceMapFromLabelMap [ 41%] Building CXX object CommandLineTools/GenerateDistanceMapFromLabelMap/CMakeFiles/GenerateDistanceMapFromLabelMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateDistanceMapFromLabelMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "Parameters" has 7 parameters Scanning dependencies of target FilterVesselParticleDataLib [ 41%] Building CXX object CommandLineTools/FilterVesselParticleData/CMakeFiles/FilterVesselParticleDataLib.dir/FilterVesselParticleData.cxx.o Linking CXX static library ../../bin/libFilterVesselParticleDataLib.a [ 41%] Built target FilterVesselParticleDataLib Scanning dependencies of target FilterVesselParticleData [ 41%] Building CXX object CommandLineTools/FilterVesselParticleData/CMakeFiles/FilterVesselParticleData.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/FilterVesselParticleData
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "Parameters" has 7 parameters Scanning dependencies of target FilterAirwayParticleDataLib [ 43%] Building CXX object CommandLineTools/FilterAirwayParticleData/CMakeFiles/FilterAirwayParticleDataLib.dir/FilterAirwayParticleData.cxx.o Linking CXX static library ../../bin/libFilterAirwayParticleDataLib.a [ 43%] Built target FilterAirwayParticleDataLib Scanning dependencies of target FilterAirwayParticleData [ 43%] Building CXX object CommandLineTools/FilterAirwayParticleData/CMakeFiles/FilterAirwayParticleData.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/FilterAirwayParticleData
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ReadNRRDsWriteVTK/ReadNRRDsWriteVTK.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ReadNRRDsWriteVTK/ReadNRRDsWriteVTKCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 11 parameters Scanning dependencies of target ReadNRRDsWriteVTKLib [ 43%] Building CXX object CommandLineTools/ReadNRRDsWriteVTK/CMakeFiles/ReadNRRDsWriteVTKLib.dir/ReadNRRDsWriteVTK.cxx.o Linking CXX static library ../../bin/libReadNRRDsWriteVTKLib.a [ 43%] Built target ReadNRRDsWriteVTKLib Scanning dependencies of target ReadNRRDsWriteVTK [ 43%] Building CXX object CommandLineTools/ReadNRRDsWriteVTK/CMakeFiles/ReadNRRDsWriteVTK.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ReadNRRDsWriteVTK
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ReadVTKWriteNRRDs/ReadVTKWriteNRRDs.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ReadVTKWriteNRRDs/ReadVTKWriteNRRDsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 2 parameters Scanning dependencies of target ReadVTKWriteNRRDsLib [ 44%] Building CXX object CommandLineTools/ReadVTKWriteNRRDs/CMakeFiles/ReadVTKWriteNRRDsLib.dir/ReadVTKWriteNRRDs.cxx.o Linking CXX static library ../../bin/libReadVTKWriteNRRDsLib.a [ 44%] Built target ReadVTKWriteNRRDsLib Scanning dependencies of target ReadVTKWriteNRRDs [ 44%] Building CXX object CommandLineTools/ReadVTKWriteNRRDs/CMakeFiles/ReadVTKWriteNRRDs.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ReadVTKWriteNRRDs
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ComputeCrossSectionalArea/ComputeCrossSectionalArea.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ComputeCrossSectionalArea/ComputeCrossSectionalAreaCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 2 parameters Scanning dependencies of target ComputeCrossSectionalAreaLib [ 46%] Building CXX object CommandLineTools/ComputeCrossSectionalArea/CMakeFiles/ComputeCrossSectionalAreaLib.dir/ComputeCrossSectionalArea.cxx.o Linking CXX static library ../../bin/libComputeCrossSectionalAreaLib.a [ 46%] Built target ComputeCrossSectionalAreaLib Scanning dependencies of target ComputeCrossSectionalArea [ 46%] Building CXX object CommandLineTools/ComputeCrossSectionalArea/CMakeFiles/ComputeCrossSectionalArea.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ComputeCrossSectionalArea
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ComputeIntensityStatistics/ComputeIntensityStatistics.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ComputeIntensityStatistics/ComputeIntensityStatisticsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 3 parameters Scanning dependencies of target ComputeIntensityStatisticsLib [ 47%] Building CXX object CommandLineTools/ComputeIntensityStatistics/CMakeFiles/ComputeIntensityStatisticsLib.dir/ComputeIntensityStatistics.cxx.o Linking CXX static library ../../bin/libComputeIntensityStatisticsLib.a [ 47%] Built target ComputeIntensityStatisticsLib Scanning dependencies of target ComputeIntensityStatistics [ 47%] Building CXX object CommandLineTools/ComputeIntensityStatistics/CMakeFiles/ComputeIntensityStatistics.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ComputeIntensityStatistics
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "" has 4 parameters Scanning dependencies of target FilterFissureParticleDataLib [ 47%] Building CXX object CommandLineTools/FilterFissureParticleData/CMakeFiles/FilterFissureParticleDataLib.dir/FilterFissureParticleData.cxx.o Linking CXX static library ../../bin/libFilterFissureParticleDataLib.a [ 47%] Built target FilterFissureParticleDataLib Scanning dependencies of target FilterFissureParticleData [ 47%] Building CXX object CommandLineTools/FilterFissureParticleData/CMakeFiles/FilterFissureParticleData.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/FilterFissureParticleData
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 6 parameters GenerateCLP: Group "" has 5 parameters Scanning dependencies of target GenerateLobeSurfaceModelsLib [ 49%] Building CXX object CommandLineTools/GenerateLobeSurfaceModels/CMakeFiles/GenerateLobeSurfaceModelsLib.dir/GenerateLobeSurfaceModels.cxx.o Linking CXX static library ../../bin/libGenerateLobeSurfaceModelsLib.a [ 49%] Built target GenerateLobeSurfaceModelsLib Scanning dependencies of target GenerateLobeSurfaceModels [ 49%] Building CXX object CommandLineTools/GenerateLobeSurfaceModels/CMakeFiles/GenerateLobeSurfaceModels.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateLobeSurfaceModels
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 6 parameters GenerateCLP: Group "Fischer Linear Discriminant Params" has 4 parameters Scanning dependencies of target ClassifyFissureParticlesLib [ 51%] Building CXX object CommandLineTools/ClassifyFissureParticles/CMakeFiles/ClassifyFissureParticlesLib.dir/ClassifyFissureParticles.cxx.o Linking CXX static library ../../bin/libClassifyFissureParticlesLib.a [ 51%] Built target ClassifyFissureParticlesLib Scanning dependencies of target ClassifyFissureParticles [ 51%] Building CXX object CommandLineTools/ClassifyFissureParticles/CMakeFiles/ClassifyFissureParticles.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ClassifyFissureParticles
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Group "IO" has 4 parameters GenerateCLP: Group "Region Type" has 4 parameters GenerateCLP: Group "Options" has 3 parameters Scanning dependencies of target CropLungLib [ 51%] Building CXX object CommandLineTools/CropLung/CMakeFiles/CropLungLib.dir/CropLung.cxx.o Linking CXX static library ../../bin/libCropLungLib.a [ 51%] Built target CropLungLib Scanning dependencies of target CropLung [ 51%] Building CXX object CommandLineTools/CropLung/CMakeFiles/CropLung.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/CropLung
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "Parameters" has 3 parameters Scanning dependencies of target GenerateModelLib [ 52%] Building CXX object CommandLineTools/GenerateModel/CMakeFiles/GenerateModelLib.dir/GenerateModel.cxx.o Linking CXX static library ../../bin/libGenerateModelLib.a [ 52%] Built target GenerateModelLib Scanning dependencies of target GenerateModel [ 52%] Building CXX object CommandLineTools/GenerateModel/CMakeFiles/GenerateModel.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateModel
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 5 parameters GenerateCLP: Group "Parameters" has 2 parameters Scanning dependencies of target GenerateImageSubVolumesLib [ 54%] Building CXX object CommandLineTools/GenerateImageSubVolumes/CMakeFiles/GenerateImageSubVolumesLib.dir/GenerateImageSubVolumes.cxx.o Linking CXX static library ../../bin/libGenerateImageSubVolumesLib.a [ 54%] Built target GenerateImageSubVolumesLib Scanning dependencies of target GenerateImageSubVolumes [ 54%] Building CXX object CommandLineTools/GenerateImageSubVolumes/CMakeFiles/GenerateImageSubVolumes.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateImageSubVolumes
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/GenerateMedianFilteredImage/GenerateMedianFilteredImage.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/GenerateMedianFilteredImage/GenerateMedianFilteredImageCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 4 parameters Scanning dependencies of target GenerateMedianFilteredImageLib [ 54%] Building CXX object CommandLineTools/GenerateMedianFilteredImage/CMakeFiles/GenerateMedianFilteredImageLib.dir/GenerateMedianFilteredImage.cxx.o Linking CXX static library ../../bin/libGenerateMedianFilteredImageLib.a [ 54%] Built target GenerateMedianFilteredImageLib Scanning dependencies of target GenerateMedianFilteredImage [ 54%] Building CXX object CommandLineTools/GenerateMedianFilteredImage/CMakeFiles/GenerateMedianFilteredImage.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateMedianFilteredImage
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/FindPatchMatch/FindPatchMatch.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/FindPatchMatch/FindPatchMatchCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "I/O" has 2 parameters Scanning dependencies of target FindPatchMatchLib [ 55%] Building CXX object CommandLineTools/FindPatchMatch/CMakeFiles/FindPatchMatchLib.dir/FindPatchMatch.cxx.o Linking CXX static library ../../bin/libFindPatchMatchLib.a [ 55%] Built target FindPatchMatchLib Scanning dependencies of target FindPatchMatch [ 55%] Building CXX object CommandLineTools/FindPatchMatch/CMakeFiles/FindPatchMatch.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/FindPatchMatch
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/TransferRegionAndTypeIndicesToFromPoints/TransferRegionAndTypeIndicesToFromPoints.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/TransferRegionAndTypeIndicesToFromPoints/TransferRegionAndTypeIndicesToFromPointsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 5 parameters Scanning dependencies of target TransferRegionAndTypeIndicesToFromPointsLib [ 57%] Building CXX object CommandLineTools/TransferRegionAndTypeIndicesToFromPoints/CMakeFiles/TransferRegionAndTypeIndicesToFromPointsLib.dir/TransferRegionAndTypeIndicesToFromPoints.cxx.o Linking CXX static library ../../bin/libTransferRegionAndTypeIndicesToFromPointsLib.a [ 57%] Built target TransferRegionAndTypeIndicesToFromPointsLib Scanning dependencies of target TransferRegionAndTypeIndicesToFromPoints [ 57%] Building CXX object CommandLineTools/TransferRegionAndTypeIndicesToFromPoints/CMakeFiles/TransferRegionAndTypeIndicesToFromPoints.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/TransferRegionAndTypeIndicesToFromPoints
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/EvaluateLungLobeSegmentationResults/EvaluateLungLobeSegmentationResults.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/EvaluateLungLobeSegmentationResults/EvaluateLungLobeSegmentationResultsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "I/O" has 9 parameters Scanning dependencies of target EvaluateLungLobeSegmentationResultsLib [ 57%] Building CXX object CommandLineTools/EvaluateLungLobeSegmentationResults/CMakeFiles/EvaluateLungLobeSegmentationResultsLib.dir/EvaluateLungLobeSegmentationResults.cxx.o Linking CXX static library ../../bin/libEvaluateLungLobeSegmentationResultsLib.a [ 57%] Built target EvaluateLungLobeSegmentationResultsLib Scanning dependencies of target EvaluateLungLobeSegmentationResults [ 57%] Building CXX object CommandLineTools/EvaluateLungLobeSegmentationResults/CMakeFiles/EvaluateLungLobeSegmentationResults.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/EvaluateLungLobeSegmentationResults
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ConvertLabelMapValueToChestRegionChestType/ConvertLabelMapValueToChestRegionChestType.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ConvertLabelMapValueToChestRegionChestType/ConvertLabelMapValueToChestRegionChestTypeCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 1 parameters Scanning dependencies of target ConvertLabelMapValueToChestRegionChestTypeLib [ 58%] Building CXX object CommandLineTools/ConvertLabelMapValueToChestRegionChestType/CMakeFiles/ConvertLabelMapValueToChestRegionChestTypeLib.dir/ConvertLabelMapValueToChestRegionChestType.cxx.o Linking CXX static library ../../bin/libConvertLabelMapValueToChestRegionChestTypeLib.a [ 58%] Built target ConvertLabelMapValueToChestRegionChestTypeLib Scanning dependencies of target ConvertLabelMapValueToChestRegionChestType [ 59%] Building CXX object CommandLineTools/ConvertLabelMapValueToChestRegionChestType/CMakeFiles/ConvertLabelMapValueToChestRegionChestType.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ConvertLabelMapValueToChestRegionChestType
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 5 parameters GenerateCLP: Group "Options" has 2 parameters Scanning dependencies of target GenerateParenchymaPhenotypesLib [ 61%] Building CXX object CommandLineTools/GenerateParenchymaPhenotypes/CMakeFiles/GenerateParenchymaPhenotypesLib.dir/GenerateParenchymaPhenotypes.cxx.o Linking CXX static library ../../bin/libGenerateParenchymaPhenotypesLib.a [ 61%] Built target GenerateParenchymaPhenotypesLib Scanning dependencies of target GenerateParenchymaPhenotypes [ 61%] Building CXX object CommandLineTools/GenerateParenchymaPhenotypes/CMakeFiles/GenerateParenchymaPhenotypes.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateParenchymaPhenotypes
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "Parameters" has 4 parameters Scanning dependencies of target ComputeDistanceMapLib [ 62%] Building CXX object CommandLineTools/ComputeDistanceMap/CMakeFiles/ComputeDistanceMapLib.dir/ComputeDistanceMap.cxx.o Linking CXX static library ../../bin/libComputeDistanceMapLib.a [ 62%] Built target ComputeDistanceMapLib Scanning dependencies of target ComputeDistanceMap [ 62%] Building CXX object CommandLineTools/ComputeDistanceMap/CMakeFiles/ComputeDistanceMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ComputeDistanceMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "Parameters" has 2 parameters Scanning dependencies of target PerturbParticlesLib [ 62%] Building CXX object CommandLineTools/PerturbParticles/CMakeFiles/PerturbParticlesLib.dir/PerturbParticles.cxx.o Linking CXX static library ../../bin/libPerturbParticlesLib.a [ 62%] Built target PerturbParticlesLib Scanning dependencies of target PerturbParticles [ 63%] Building CXX object CommandLineTools/PerturbParticles/CMakeFiles/PerturbParticles.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/PerturbParticles
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ReadWriteRegionAndTypePoints/ReadWriteRegionAndTypePoints.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ReadWriteRegionAndTypePoints/ReadWriteRegionAndTypePointsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 2 parameters Scanning dependencies of target ReadWriteRegionAndTypePointsLib [ 64%] Building CXX object CommandLineTools/ReadWriteRegionAndTypePoints/CMakeFiles/ReadWriteRegionAndTypePointsLib.dir/ReadWriteRegionAndTypePoints.cxx.o Linking CXX static library ../../bin/libReadWriteRegionAndTypePointsLib.a [ 64%] Built target ReadWriteRegionAndTypePointsLib Scanning dependencies of target ReadWriteRegionAndTypePoints [ 64%] Building CXX object CommandLineTools/ReadWriteRegionAndTypePoints/CMakeFiles/ReadWriteRegionAndTypePoints.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ReadWriteRegionAndTypePoints
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Group "I/O" has 2 parameters GenerateCLP: Group "morphological operators" has 4 parameters GenerateCLP: Group "morphological parameters" has 6 parameters Scanning dependencies of target PerformMorphologicalLib [ 65%] Building CXX object CommandLineTools/PerformMorphological/CMakeFiles/PerformMorphologicalLib.dir/PerformMorphological.cxx.o Linking CXX static library ../../bin/libPerformMorphologicalLib.a [ 65%] Built target PerformMorphologicalLib Scanning dependencies of target PerformMorphological [ 65%] Building CXX object CommandLineTools/PerformMorphological/CMakeFiles/PerformMorphological.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/PerformMorphological
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 4 parameters GenerateCLP: Group "" has 10 parameters Scanning dependencies of target GenerateOverlayImagesLib [ 66%] Building CXX object CommandLineTools/GenerateOverlayImages/CMakeFiles/GenerateOverlayImagesLib.dir/GenerateOverlayImages.cxx.o Linking CXX static library ../../bin/libGenerateOverlayImagesLib.a [ 66%] Built target GenerateOverlayImagesLib Scanning dependencies of target GenerateOverlayImages [ 66%] Building CXX object CommandLineTools/GenerateOverlayImages/CMakeFiles/GenerateOverlayImages.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateOverlayImages
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 6 parameters GenerateCLP: Group "Similarity parameters" has 5 parameters Scanning dependencies of target GetTransformationSimilarityMetricLib [ 66%] Building CXX object CommandLineTools/GetTransformationSimilarityMetric/CMakeFiles/GetTransformationSimilarityMetricLib.dir/GetTransformationSimilarityMetric.cxx.o Linking CXX static library ../../bin/libGetTransformationSimilarityMetricLib.a [ 66%] Built target GetTransformationSimilarityMetricLib Scanning dependencies of target GetTransformationSimilarityMetric [ 66%] Building CXX object CommandLineTools/GetTransformationSimilarityMetric/CMakeFiles/GetTransformationSimilarityMetric.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GetTransformationSimilarityMetric
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 6 parameters GenerateCLP: Group "Similarity parameters" has 4 parameters Scanning dependencies of target GetTransformationKappa2DLib [ 67%] Building CXX object CommandLineTools/GetTransformationKappa2D/CMakeFiles/GetTransformationKappa2DLib.dir/GetTransformationKappa2D.cxx.o Linking CXX static library ../../bin/libGetTransformationKappa2DLib.a [ 67%] Built target GetTransformationKappa2DLib Scanning dependencies of target GetTransformationKappa2D [ 67%] Building CXX object CommandLineTools/GetTransformationKappa2D/CMakeFiles/GetTransformationKappa2D.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GetTransformationKappa2D
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 6 parameters GenerateCLP: Group "Similarity parameters" has 4 parameters Scanning dependencies of target GetTransformationKappaLib [ 68%] Building CXX object CommandLineTools/GetTransformationKappa/CMakeFiles/GetTransformationKappaLib.dir/GetTransformationKappa.cxx.o Linking CXX static library ../../bin/libGetTransformationKappaLib.a [ 68%] Built target GetTransformationKappaLib Scanning dependencies of target GetTransformationKappa [ 69%] Building CXX object CommandLineTools/GetTransformationKappa/CMakeFiles/GetTransformationKappa.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GetTransformationKappa
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ReadWriteImageData/ReadWriteImageData.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ReadWriteImageData/ReadWriteImageDataCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 4 parameters Scanning dependencies of target ReadWriteImageDataLib [ 71%] Building CXX object CommandLineTools/ReadWriteImageData/CMakeFiles/ReadWriteImageDataLib.dir/ReadWriteImageData.cxx.o Linking CXX static library ../../bin/libReadWriteImageDataLib.a [ 71%] Built target ReadWriteImageDataLib Scanning dependencies of target ReadWriteImageData [ 71%] Building CXX object CommandLineTools/ReadWriteImageData/CMakeFiles/ReadWriteImageData.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ReadWriteImageData
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/GetStructuresInLabelMap/GetStructuresInLabelMap.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/GetStructuresInLabelMap/GetStructuresInLabelMapCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 1 parameters Scanning dependencies of target GetStructuresInLabelMapLib [ 71%] Building CXX object CommandLineTools/GetStructuresInLabelMap/CMakeFiles/GetStructuresInLabelMapLib.dir/GetStructuresInLabelMap.cxx.o Linking CXX static library ../../bin/libGetStructuresInLabelMapLib.a [ 71%] Built target GetStructuresInLabelMapLib Scanning dependencies of target GetStructuresInLabelMap [ 72%] Building CXX object CommandLineTools/GetStructuresInLabelMap/CMakeFiles/GetStructuresInLabelMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GetStructuresInLabelMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 3 parameters GenerateCLP: Group "Parameters" has 9 parameters Scanning dependencies of target GeneratePartialLungLabelMapLib [ 73%] Building CXX object CommandLineTools/GeneratePartialLungLabelMap/CMakeFiles/GeneratePartialLungLabelMapLib.dir/GeneratePartialLungLabelMap.cxx.o Linking CXX static library ../../bin/libGeneratePartialLungLabelMapLib.a [ 73%] Built target GeneratePartialLungLabelMapLib Scanning dependencies of target GeneratePartialLungLabelMap [ 73%] Building CXX object CommandLineTools/GeneratePartialLungLabelMap/CMakeFiles/GeneratePartialLungLabelMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GeneratePartialLungLabelMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 3 parameters GenerateCLP: Group "Parameters" has 2 parameters Scanning dependencies of target ReadVidaWriteCIPLib [ 74%] Building CXX object CommandLineTools/ReadVidaWriteCIP/CMakeFiles/ReadVidaWriteCIPLib.dir/ReadVidaWriteCIP.cxx.o Linking CXX static library ../../bin/libReadVidaWriteCIPLib.a [ 74%] Built target ReadVidaWriteCIPLib Scanning dependencies of target ReadVidaWriteCIP [ 74%] Building CXX object CommandLineTools/ReadVidaWriteCIP/CMakeFiles/ReadVidaWriteCIP.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ReadVidaWriteCIP
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 7 parameters GenerateCLP: Group "Registration parameters" has 6 parameters Scanning dependencies of target RegisterLabelMapsLib [ 75%] Building CXX object CommandLineTools/RegisterLabelMaps/CMakeFiles/RegisterLabelMapsLib.dir/RegisterLabelMaps.cxx.o Linking CXX static library ../../bin/libRegisterLabelMapsLib.a [ 75%] Built target RegisterLabelMapsLib Scanning dependencies of target RegisterLabelMaps [ 75%] Building CXX object CommandLineTools/RegisterLabelMaps/CMakeFiles/RegisterLabelMaps.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/RegisterLabelMaps
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 8 parameters GenerateCLP: Group "Registration parameters" has 10 parameters Scanning dependencies of target RegisterCTLib [ 76%] Building CXX object CommandLineTools/RegisterCT/CMakeFiles/RegisterCTLib.dir/RegisterCT.cxx.o Linking CXX static library ../../bin/libRegisterCTLib.a [ 76%] Built target RegisterCTLib Scanning dependencies of target RegisterCT [ 76%] Building CXX object CommandLineTools/RegisterCT/CMakeFiles/RegisterCT.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/RegisterCT
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 3 parameters GenerateCLP: Group "Rules" has 7 parameters Scanning dependencies of target MergeChestLabelMapsLib [ 77%] Building CXX object CommandLineTools/MergeChestLabelMaps/CMakeFiles/MergeChestLabelMapsLib.dir/MergeChestLabelMaps.cxx.o Linking CXX static library ../../bin/libMergeChestLabelMapsLib.a [ 77%] Built target MergeChestLabelMapsLib Scanning dependencies of target MergeChestLabelMaps [ 77%] Building CXX object CommandLineTools/MergeChestLabelMaps/CMakeFiles/MergeChestLabelMaps.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/MergeChestLabelMaps
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "" has 3 parameters Scanning dependencies of target MaskOutLabelMapStructuresLib [ 78%] Building CXX object CommandLineTools/MaskOutLabelMapStructures/CMakeFiles/MaskOutLabelMapStructuresLib.dir/MaskOutLabelMapStructures.cxx.o Linking CXX static library ../../bin/libMaskOutLabelMapStructuresLib.a [ 78%] Built target MaskOutLabelMapStructuresLib Scanning dependencies of target MaskOutLabelMapStructures [ 78%] Building CXX object CommandLineTools/MaskOutLabelMapStructures/CMakeFiles/MaskOutLabelMapStructures.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/MaskOutLabelMapStructures
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Group "General Parameters" has 6 parameters GenerateCLP: Group "Frangi and Decouteaux Methods Parameters" has 3 parameters GenerateCLP: Group "Strain Energy's method Parameters" has 4 parameters Scanning dependencies of target ComputeFeatureStrengthLib [ 79%] Building CXX object CommandLineTools/ComputeFeatureStrength/CMakeFiles/ComputeFeatureStrengthLib.dir/ComputeFeatureStrength.cxx.o Linking CXX static library ../../bin/libComputeFeatureStrengthLib.a [ 79%] Built target ComputeFeatureStrengthLib Scanning dependencies of target ComputeFeatureStrength [ 79%] Building CXX object CommandLineTools/ComputeFeatureStrength/CMakeFiles/ComputeFeatureStrength.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ComputeFeatureStrength
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/LabelMapFromRegionAndTypePoints/LabelMapFromRegionAndTypePoints.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/LabelMapFromRegionAndTypePoints/LabelMapFromRegionAndTypePointsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 4 parameters Scanning dependencies of target LabelMapFromRegionAndTypePointsLib [ 80%] Building CXX object CommandLineTools/LabelMapFromRegionAndTypePoints/CMakeFiles/LabelMapFromRegionAndTypePointsLib.dir/LabelMapFromRegionAndTypePoints.cxx.o Linking CXX static library ../../bin/libLabelMapFromRegionAndTypePointsLib.a [ 80%] Built target LabelMapFromRegionAndTypePointsLib Scanning dependencies of target LabelMapFromRegionAndTypePoints [ 80%] Building CXX object CommandLineTools/LabelMapFromRegionAndTypePoints/CMakeFiles/LabelMapFromRegionAndTypePoints.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/LabelMapFromRegionAndTypePoints
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 2 parameters GenerateCLP: Group "Parameters" has 1 parameters Scanning dependencies of target GenerateSimpleLungMaskLib [ 81%] Building CXX object CommandLineTools/GenerateSimpleLungMask/CMakeFiles/GenerateSimpleLungMaskLib.dir/GenerateSimpleLungMask.cxx.o Linking CXX static library ../../bin/libGenerateSimpleLungMaskLib.a [ 81%] Built target GenerateSimpleLungMaskLib Scanning dependencies of target GenerateSimpleLungMask [ 81%] Building CXX object CommandLineTools/GenerateSimpleLungMask/CMakeFiles/GenerateSimpleLungMask.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateSimpleLungMask
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' Copying XML file 'GenerateSimpleLungMask.xml' along side the executable
GenerateCLP --InputXML /.../CIP/CommandLineTools/GenerateBinaryThinning3D/GenerateBinaryThinning3D.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/GenerateBinaryThinning3D/GenerateBinaryThinning3DCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 2 parameters Scanning dependencies of target GenerateBinaryThinning3DLib [ 82%] Building CXX object CommandLineTools/GenerateBinaryThinning3D/CMakeFiles/GenerateBinaryThinning3DLib.dir/GenerateBinaryThinning3D.cxx.o Linking CXX static library ../../bin/libGenerateBinaryThinning3DLib.a [ 82%] Built target GenerateBinaryThinning3DLib Scanning dependencies of target GenerateBinaryThinning3D [ 82%] Building CXX object CommandLineTools/GenerateBinaryThinning3D/CMakeFiles/GenerateBinaryThinning3D.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateBinaryThinning3D
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ConvertChestRegionChestTypeToLabelMapValue/ConvertChestRegionChestTypeToLabelMapValue.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ConvertChestRegionChestTypeToLabelMapValue/ConvertChestRegionChestTypeToLabelMapValueCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 2 parameters Scanning dependencies of target ConvertChestRegionChestTypeToLabelMapValueLib [ 82%] Building CXX object CommandLineTools/ConvertChestRegionChestTypeToLabelMapValue/CMakeFiles/ConvertChestRegionChestTypeToLabelMapValueLib.dir/ConvertChestRegionChestTypeToLabelMapValue.cxx.o Linking CXX static library ../../bin/libConvertChestRegionChestTypeToLabelMapValueLib.a [ 82%] Built target ConvertChestRegionChestTypeToLabelMapValueLib Scanning dependencies of target ConvertChestRegionChestTypeToLabelMapValue [ 83%] Building CXX object CommandLineTools/ConvertChestRegionChestTypeToLabelMapValue/CMakeFiles/ConvertChestRegionChestTypeToLabelMapValue.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ConvertChestRegionChestTypeToLabelMapValue
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/FilterConnectedComponents/FilterConnectedComponents.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/FilterConnectedComponents/FilterConnectedComponentsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 15 parameters Scanning dependencies of target FilterConnectedComponentsLib [ 84%] Building CXX object CommandLineTools/FilterConnectedComponents/CMakeFiles/FilterConnectedComponentsLib.dir/FilterConnectedComponents.cxx.o Linking CXX static library ../../bin/libFilterConnectedComponentsLib.a [ 84%] Built target FilterConnectedComponentsLib Scanning dependencies of target FilterConnectedComponents [ 84%] Building CXX object CommandLineTools/FilterConnectedComponents/CMakeFiles/FilterConnectedComponents.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/FilterConnectedComponents
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/EnhanceFissuresInImage/EnhanceFissuresInImage.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/EnhanceFissuresInImage/EnhanceFissuresInImageCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 5 parameters Scanning dependencies of target EnhanceFissuresInImageLib [ 85%] Building CXX object CommandLineTools/EnhanceFissuresInImage/CMakeFiles/EnhanceFissuresInImageLib.dir/EnhanceFissuresInImage.cxx.o Linking CXX static library ../../bin/libEnhanceFissuresInImageLib.a [ 85%] Built target EnhanceFissuresInImageLib Scanning dependencies of target EnhanceFissuresInImage [ 85%] Building CXX object CommandLineTools/EnhanceFissuresInImage/CMakeFiles/EnhanceFissuresInImage.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/EnhanceFissuresInImage
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ComputeFissureFeatureVectors/ComputeFissureFeatureVectors.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ComputeFissureFeatureVectors/ComputeFissureFeatureVectorsCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 8 parameters Scanning dependencies of target ComputeFissureFeatureVectorsLib [ 87%] Building CXX object CommandLineTools/ComputeFissureFeatureVectors/CMakeFiles/ComputeFissureFeatureVectorsLib.dir/ComputeFissureFeatureVectors.cxx.o Linking CXX static library ../../bin/libComputeFissureFeatureVectorsLib.a [ 87%] Built target ComputeFissureFeatureVectorsLib Scanning dependencies of target ComputeFissureFeatureVectors [ 87%] Building CXX object CommandLineTools/ComputeFissureFeatureVectors/CMakeFiles/ComputeFissureFeatureVectors.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ComputeFissureFeatureVectors
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 10 parameters GenerateCLP: Group "" has 11 parameters Scanning dependencies of target FitLobeSurfaceModelsToParticleDataLib [ 88%] Building CXX object CommandLineTools/FitLobeSurfaceModelsToParticleData/CMakeFiles/FitLobeSurfaceModelsToParticleDataLib.dir/FitLobeSurfaceModelsToParticleData.cxx.o Linking CXX static library ../../bin/libFitLobeSurfaceModelsToParticleDataLib.a [ 88%] Built target FitLobeSurfaceModelsToParticleDataLib Scanning dependencies of target FitLobeSurfaceModelsToParticleData [ 88%] Building CXX object CommandLineTools/FitLobeSurfaceModelsToParticleData/CMakeFiles/FitLobeSurfaceModelsToParticleData.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/FitLobeSurfaceModelsToParticleData
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Group "IO" has 3 parameters GenerateCLP: Group "Lesion ROI" has 5 parameters GenerateCLP: Group "Segmentation Options" has 2 parameters Scanning dependencies of target GenerateLesionSegmentationLib [ 89%] Building CXX object CommandLineTools/GenerateLesionSegmentation/CMakeFiles/GenerateLesionSegmentationLib.dir/GenerateLesionSegmentation.cxx.o Linking CXX static library ../../bin/libGenerateLesionSegmentationLib.a [ 89%] Built target GenerateLesionSegmentationLib Scanning dependencies of target GenerateLesionSegmentation [ 89%] Building CXX object CommandLineTools/GenerateLesionSegmentation/CMakeFiles/GenerateLesionSegmentation.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateLesionSegmentation
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/RemapLabelMap/RemapLabelMap.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/RemapLabelMap/RemapLabelMapCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "" has 4 parameters Scanning dependencies of target RemapLabelMapLib [ 89%] Building CXX object CommandLineTools/RemapLabelMap/CMakeFiles/RemapLabelMapLib.dir/RemapLabelMap.cxx.o Linking CXX static library ../../bin/libRemapLabelMapLib.a [ 89%] Built target RemapLabelMapLib Scanning dependencies of target RemapLabelMap [ 90%] Building CXX object CommandLineTools/RemapLabelMap/CMakeFiles/RemapLabelMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/RemapLabelMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 3 parameters GenerateCLP: Group "Parameters" has 5 parameters Scanning dependencies of target GenerateNLMFilteredImageLib [ 91%] Building CXX object CommandLineTools/GenerateNLMFilteredImage/CMakeFiles/GenerateNLMFilteredImageLib.dir/GenerateNLMFilteredImage.cxx.o Linking CXX static library ../../bin/libGenerateNLMFilteredImageLib.a [ 91%] Built target GenerateNLMFilteredImageLib Scanning dependencies of target GenerateNLMFilteredImage [ 91%] Building CXX object CommandLineTools/GenerateNLMFilteredImage/CMakeFiles/GenerateNLMFilteredImage.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateNLMFilteredImage
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 3 parameters GenerateCLP: Group "Parameters" has 13 parameters Scanning dependencies of target ComputeAirwayWallFromParticlesLib [ 92%] Building CXX object CommandLineTools/ComputeAirwayWallFromParticles/CMakeFiles/ComputeAirwayWallFromParticlesLib.dir/ComputeAirwayWallFromParticles.cxx.o Linking CXX static library ../../bin/libComputeAirwayWallFromParticlesLib.a [ 92%] Built target ComputeAirwayWallFromParticlesLib Scanning dependencies of target ComputeAirwayWallFromParticles [ 92%] Building CXX object CommandLineTools/ComputeAirwayWallFromParticles/CMakeFiles/ComputeAirwayWallFromParticles.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ComputeAirwayWallFromParticles
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/RegionTypeLocationsToROIVolume/RegionTypeLocationsToROIVolume.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/RegionTypeLocationsToROIVolume/RegionTypeLocationsToROIVolumeCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 8 parameters Scanning dependencies of target RegionTypeLocationsToROIVolumeLib [ 93%] Building CXX object CommandLineTools/RegionTypeLocationsToROIVolume/CMakeFiles/RegionTypeLocationsToROIVolumeLib.dir/RegionTypeLocationsToROIVolume.cxx.o Linking CXX static library ../../bin/libRegionTypeLocationsToROIVolumeLib.a [ 93%] Built target RegionTypeLocationsToROIVolumeLib Scanning dependencies of target RegionTypeLocationsToROIVolume [ 93%] Building CXX object CommandLineTools/RegionTypeLocationsToROIVolume/CMakeFiles/RegionTypeLocationsToROIVolume.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/RegionTypeLocationsToROIVolume
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ExtractFissureBoundaryFromLobeMap/ExtractFissureBoundaryFromLobeMap.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ExtractFissureBoundaryFromLobeMap/ExtractFissureBoundaryFromLobeMapCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "IO" has 2 parameters Scanning dependencies of target ExtractFissureBoundaryFromLobeMapLib [ 94%] Building CXX object CommandLineTools/ExtractFissureBoundaryFromLobeMap/CMakeFiles/ExtractFissureBoundaryFromLobeMapLib.dir/ExtractFissureBoundaryFromLobeMap.cxx.o Linking CXX static library ../../bin/libExtractFissureBoundaryFromLobeMapLib.a [ 94%] Built target ExtractFissureBoundaryFromLobeMapLib Scanning dependencies of target ExtractFissureBoundaryFromLobeMap [ 94%] Building CXX object CommandLineTools/ExtractFissureBoundaryFromLobeMap/CMakeFiles/ExtractFissureBoundaryFromLobeMap.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ExtractFissureBoundaryFromLobeMap
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP --InputXML /.../CIP/CommandLineTools/ExecuteSystemCommand/ExecuteSystemCommand.xml --OutputCxx /.../CIP-build/CIP-build/CommandLineTools/ExecuteSystemCommand/ExecuteSystemCommandCLP.h GenerateCLP: Found 1 parameters groups GenerateCLP: Group "Command" has 2 parameters Scanning dependencies of target ExecuteSystemCommandLib [ 95%] Building CXX object CommandLineTools/ExecuteSystemCommand/CMakeFiles/ExecuteSystemCommandLib.dir/ExecuteSystemCommand.cxx.o Linking CXX static library ../../bin/libExecuteSystemCommandLib.a [ 95%] Built target ExecuteSystemCommandLib Scanning dependencies of target ExecuteSystemCommand [ 95%] Building CXX object CommandLineTools/ExecuteSystemCommand/CMakeFiles/ExecuteSystemCommand.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ExecuteSystemCommand
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 1 parameters GenerateCLP: Group "GC Params" has 4 parameters Scanning dependencies of target GraphCutsOptimizationLib [ 95%] Building CXX object CommandLineTools/GraphCutsOptimization/CMakeFiles/GraphCutsOptimizationLib.dir/GraphCutsOptimization.cxx.o Linking CXX static library ../../bin/libGraphCutsOptimizationLib.a [ 95%] Built target GraphCutsOptimizationLib Scanning dependencies of target GraphCutsOptimization [ 95%] Building CXX object CommandLineTools/GraphCutsOptimization/CMakeFiles/GraphCutsOptimization.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GraphCutsOptimization
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "Segmentation Parameters" has 1 parameters GenerateCLP: Group "IO" has 4 parameters Scanning dependencies of target SegmentLungAirwaysLib [ 97%] Building CXX object CommandLineTools/SegmentLungAirways/CMakeFiles/SegmentLungAirwaysLib.dir/SegmentLungAirways.cxx.o Linking CXX static library ../../bin/libSegmentLungAirwaysLib.a [ 97%] Built target SegmentLungAirwaysLib Scanning dependencies of target SegmentLungAirways [ 97%] Building CXX object CommandLineTools/SegmentLungAirways/CMakeFiles/SegmentLungAirways.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/SegmentLungAirways
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 3 parameters GenerateCLP: Group "" has 2 parameters Scanning dependencies of target ReadParticlesWriteConnectedParticlesLib [ 97%] Building CXX object CommandLineTools/ReadParticlesWriteConnectedParticles/CMakeFiles/ReadParticlesWriteConnectedParticlesLib.dir/ReadParticlesWriteConnectedParticles.cxx.o Linking CXX static library ../../bin/libReadParticlesWriteConnectedParticlesLib.a [ 97%] Built target ReadParticlesWriteConnectedParticlesLib Scanning dependencies of target ReadParticlesWriteConnectedParticles [ 97%] Building CXX object CommandLineTools/ReadParticlesWriteConnectedParticles/CMakeFiles/ReadParticlesWriteConnectedParticles.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/ReadParticlesWriteConnectedParticles
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "IO" has 3 parameters GenerateCLP: Group "" has 5 parameters Scanning dependencies of target LabelAirwayParticlesByGenerationLib [ 99%] Building CXX object CommandLineTools/LabelAirwayParticlesByGeneration/CMakeFiles/LabelAirwayParticlesByGenerationLib.dir/LabelAirwayParticlesByGeneration.cxx.o Linking CXX static library ../../bin/libLabelAirwayParticlesByGenerationLib.a [ 99%] Built target LabelAirwayParticlesByGenerationLib Scanning dependencies of target LabelAirwayParticlesByGeneration [ 99%] Building CXX object CommandLineTools/LabelAirwayParticlesByGeneration/CMakeFiles/LabelAirwayParticlesByGeneration.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/LabelAirwayParticlesByGeneration
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' Copying XML file 'LabelAirwayParticlesByGeneration.xml' along side the executable /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite'
GenerateCLP: Found 2 parameters groups GenerateCLP: Group "I/O" has 5 parameters GenerateCLP: Group "Parameters" has 2 parameters Scanning dependencies of target GenerateStatisticsForAirwayGenerationLabelingLib [100%] Building CXX object CommandLineTools/GenerateStatisticsForAirwayGenerationLabeling/CMakeFiles/GenerateStatisticsForAirwayGenerationLabelingLib.dir/GenerateStatisticsForAirwayGenerationLabeling.cxx.o Linking CXX static library ../../bin/libGenerateStatisticsForAirwayGenerationLabelingLib.a [100%] Built target GenerateStatisticsForAirwayGenerationLabelingLib Scanning dependencies of target GenerateStatisticsForAirwayGenerationLabeling [100%] Building CXX object CommandLineTools/GenerateStatisticsForAirwayGenerationLabeling/CMakeFiles/GenerateStatisticsForAirwayGenerationLabeling.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o Linking CXX executable ../../bin/GenerateStatisticsForAirwayGenerationLabeling
/usr/bin/ld: warning: libXrender.so.1, needed by /.../CIP-build/CIPPython-install/lib/libQtGui.so, not found (try using -rpath or -rpath-link)
/.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCompositeTrapezoids' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryExtension' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreatePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderQueryVersion' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderAddGlyphs' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderCreateGlyphSet' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFindStandardFormat' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderChangePicture' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderComposite' /.../CIP-build/CIPPython-install/lib/libQtGui.so: undefined reference to `XRenderFreePicture'
