CDash : CIP

Site Name: ip-172-31-24-227.ec2.internal
Build Name: CIP-Linux-3.10.0-123.8.1.el7.x86_64-x86_64-incr-SL-ON-SL-OFF (view notes)
Stamp: 20161017-0400-Nightly (related builds)
Time: 2016-10-17T00:06:23 EDT
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.10.0-123.8.1.el7.x86_64
OS Version: #1 SMP Mon Sep 22 19:06:58 UTC 2014
Compiler Version: unknown
CTest version: ctest-2.8.11

Current Build
Stage	Errors	Warnings
Update
Configure	0	0
Build	4	7
Test	24	0

Previous Build
Stage	Errors	Warnings
Update	0	0
Configure	0	0
Build	4	7
Test	24	0

History

Show Build History
Build History Filter

Notes

Add a Note to this Build

Graph

Show Build Graphs

Configure (0 errors, 0 warnings)

Start Time: 2016-10-17T00:06:06 EDT
End Time: 2016-10-17T00:06:18 EDT
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/home/centos/Projects/CIP"
Configure Return Value: 0
Configure Output:

----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
-- Using Infovis Boost
----------- DONE ------------
Appending new list
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull
-- Configuring SEM CLI module: RegisterLungAtlas
-- Configuring SEM CLI module: ResampleLabelMap
-- Configuring SEM CLI module: RescaleLabelMap
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ReadVTKWriteNRRDs
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: FindPatchMatch
-- Configuring SEM CLI module: TransferRegionAndTypeIndicesToFromPoints
-- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric
-- Configuring SEM CLI module: GetTransformationKappa2D
-- Configuring SEM CLI module: GetTransformationKappa
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: ReadVidaWriteCIP
-- Configuring SEM CLI module: RegisterLabelMaps
-- Configuring SEM CLI module: RegisterCT
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue
-- Configuring SEM CLI module: FilterConnectedComponents
-- Configuring SEM CLI module: EnhanceFissuresInImage
-- Configuring SEM CLI module: ComputeFissureFeatureVectors
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring SEM CLI module: GenerateLesionSegmentation
-- Configuring SEM CLI module: RemapLabelMap
-- Configuring SEM CLI module: GenerateNLMFilteredImage
-- Configuring SEM CLI module: ComputeAirwayWallFromParticles
-- Configuring SEM CLI module: RegionTypeLocationsToROIVolume
-- Configuring SEM CLI module: ExtractFissureBoundaryFromLobeMap
-- Configuring SEM CLI module: ExecuteSystemCommand
-- Configuring SEM CLI module: AVGraphCut
-- Configuring SEM CLI module: ReadParticlesWriteConnectedParticles
-- Configuring SEM CLI module: LabelAirwayParticlesByGeneration
-- Configuring SEM CLI module: GenerateStatisticsForAirwayGenerationLabeling
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/__init__.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/common
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/common/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/common/paths.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/common/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/common/tests/test_geometry_topology_data.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/common/chest_conventions_static.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/common/chest_conventions.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/common/cipChestConventionsXmlParser.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/common/geometry_topology_data.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/apply_reader_labels.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/classify_image_subtypes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/distance_feature_extractor.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/distance_feature_extractor_from_ROI.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/distance_feature_extractor_from_xmlpoints.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/emphysema_classification.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/get_ct_patch_from_center.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/hist_dist_knn.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/hist_dist_scikit_knn.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/kde_.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/kde_bandwidth.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/kde_histogram_feature_extractor.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/kde_histogram_feature_extractor_from_ROI.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/kde_histogram_feature_extractor_from_xmlpoints.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/lattice_classifier.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/local_histogram.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_apply_reader_labels.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_classify_image_subtypes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_distance_feature_extractor.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_distance_feature_extractor_from_ROI.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_distance_feature_extractor_from_xml_points.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_distance_histogram_extractors.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_get_ct_patch_from_center.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_hist_dist_knn.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_hist_dist_scikit_knn.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_kde_histogram_feature_extractor.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_kde_histogram_feature_extractor_from_ROI.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/classification/tests/test_kde_histogram_feature_extractor_from_xmlpoints.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/input_output
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/input_output/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/input_output/image_reader_writer.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/input_output/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/input_output/tests/test_image_reader_writer.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/cip_convention_manager.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/cip_node.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/__init__.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/cip
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/cip/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/cip/base.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/cip/cip.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/cip/cip_python_interfaces.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/cip/generate_classes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/cip/setup.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/unu
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/unu/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/interfaces/unu/unu.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflow_dispatcher.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/body_composition_workflow.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/cip_workflow.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/example.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/parenchyma_phenotype_workflow.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/parenchyma_phenotype_workflow_autocase.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/tests/test_vessel_particles_mask_workflow.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/vessel_particles_mask_workflow.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/vessel_particles_workflow.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/workflows/lung_lobe_segmentation_workflow.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/nipype/__init__.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/airway_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/chest_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/diaphragm_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/feature_strength_map.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/fissure_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/multires_airway_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/multires_vessel_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/particle_metrics.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_airway_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_fissure_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_particle_metrics.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/tests/test_vessel_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/particles/vessel_particles.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/body_composition_phenotypes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/bronchiectasis.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/diaphragm_thickness.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/emphysema_severity.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/gas_trapping.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/laa_phenotypes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/phenotypes.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests/test_body_composition_phenotypes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests/test_emphysema_severity.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests/test_laa_phenotypes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/tests/test_parenchyma_phenotypes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/vasculature.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/vasculature_phenotypes.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/phenotypes/parenchyma_phenotypes.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/qualitycontrol
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/__init__.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/vasculature_qc.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/qualitycontrol/xml_points_qc.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/registration
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/registration/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/registration/cip_registration.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/registration/tests
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/chest_partition.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/chest_partition_manager.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/comput_image_similarity.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/construct_chest_atlas.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/construct_pec_atlas_from_filenames.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/gaussian_rician.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/grid_segmenter.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/pectoralis_segmentor.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/register_tobase_get_closest.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/rind_vs_core_partition.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/segment_chest_with_atlas.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/slic_segmenter.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/tests/test_grid_segmenter.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/segmentation/tests/test_rind_vs_core_partition.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/WeightedFeatureMapDensity.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/anonymize_dicom.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/apply_label_from_classification.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/cluster_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/compute_dice_coefficient.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/feature_maps.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/generate_CLIs_description.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/generate_overlay_image.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/get_closest_cases.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/get_mi_similarity_vec.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/polynomial_feature_map.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/query_dicom_directories.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/quick_airway_vessel_segmentation.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/read_nrrds_write_vtk.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/region_type_parser.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/remap_lm.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_anonymize_dicom.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_compute_dice_coefficient.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_feature_maps.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_read_geometrytopologypoint_write_dataframe.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_region_type_parser.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_remap_lm.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_weighted_feature_map_densities.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/tests/test_read_geometrytopologypoint_write_polydata.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/weighted_feature_map_densities.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/read_geometrytopologypoint_write_polydata.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/utils/read_geometrytopologypoint_write_dataframe.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/visualization
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/visualization/__init__.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/visualization/display_particles.py
-- Up-to-date: /home/centos/Projects/CIP-build/CIP-build/cip_python/visualization/display_particles_volume.py
-- Installing: /home/centos/Projects/CIP-build/CIP-build/cip_python/visualization/tests
-- Configuring done
-- Generating done
-- Build files have been written to: /home/centos/Projects/CIP-build/CIP-build

View Configure Summary

Build (4 errors, 7 warnings)

Build command: /usr/bin/gmake -i
Start Time: 2016-10-17T00:06:23 EDT
End Time: 2016-10-17T00:07:53 EDT

Build Log line 1657

File: CommandLineTools/AVGraphCut/AVGraphCut.cxx Line: 94

[ 92%] Built target RegionTypeLocationsToROIVolume
[ 92%] Built target RegionTypeLocationsToROIVolumeTest
[ 92%] Built target ExtractFissureBoundaryFromLobeMapLib
[ 92%] Built target ExtractFissureBoundaryFromLobeMap
[ 93%] Built target ExtractFissureBoundaryFromLobeMapTest
[ 93%] Built target ExecuteSystemCommandLib
[ 94%] Built target ExecuteSystemCommand
[ 95%] Built target ExecuteSystemCommandTest
[ 95%] Building CXX object CommandLineTools/AVGraphCut/CMakeFiles/AVGraphCutLib.dir/AVGraphCut.cxx.o
/.../CIP/CommandLineTools/AVGraphCut/AVGraphCut.cxx: In function ‘void SaveData(std::vector<int, std::allocator<int> >, std::string, std::string)’:

/.../CIP/CommandLineTools/AVGraphCut/AVGraphCut.cxx:94:27: error: no matching function for call to ‘std::basic_ofstream<char>::basic_ofstream(std::string&)’

  ofstream outfile(namefile);
                           ^

/usr/bin/ar: CMakeFiles/AVGraphCutLib.dir/AVGraphCut.cxx.o: No such file or directory

[ 95%] Built target AVGraphCutLib

gmake[5]: *** No rule to make target `bin/libAVGraphCutLib.a', needed by `bin/AVGraphCut'.  Stop.

[ 95%] Built target AVGraphCut

gmake[5]: *** No rule to make target `bin/libAVGraphCutLib.a', needed by `CommandLineTools/Testing/bin/AVGraphCutTest'.  Stop.

[ 96%] Built target AVGraphCutTest
[ 97%] Built target ReadParticlesWriteConnectedParticlesLib
[ 97%] Built target ReadParticlesWriteConnectedParticles
[ 97%] Built target ReadParticlesWriteConnectedParticlesTest
[ 98%] Built target LabelAirwayParticlesByGenerationLib
[ 98%] Built target LabelAirwayParticlesByGeneration
[ 98%] Built target LabelAirwayParticlesByGenerationTest
[ 98%] Built target GenerateStatisticsForAirwayGenerationLabelingLib
[ 99%] Built target GenerateStatisticsForAirwayGenerationLabeling
[100%] Built target GenerateStatisticsForAirwayGenerationLabelingTest

View Errors Summary

Build Warnings (7)

Build Log line 1660

File: CommandLineTools/AVGraphCut/AVGraphCut.cxx Line: 94

/.../CIP/CommandLineTools/AVGraphCut/AVGraphCut.cxx:94:27: note: candidates are:

In file included from /.../CIP-build/VTKv7/Common/Core/vtkIOStream.h:29:0,
                 from /.../CIP-build/VTKv7/Common/Core/vtkSystemIncludes.h:36,
                 from /.../CIP-build/VTKv7/Common/Core/vtkIndent.h:25,
                 from /.../CIP-build/VTKv7/Common/Core/vtkObjectBase.h:44,
                 from /.../CIP-build/VTKv7/Common/Core/vtkSmartPointerBase.h:27,
                 from /.../CIP-build/VTKv7/Common/Core/vtkSmartPointer.h:23,
                 from /.../CIP/Common/cipHelper.h:12,
                 from /.../CIP/CommandLineTools/AVGraphCut/AVGraphCut.cxx:7:

Build Log line 1669

File: /usr/include/c++/4.8.2/fstream Line: 640

/usr/include/c++/4.8.2/fstream:640:7: note: std::basic_ofstream<_CharT, _Traits>::basic_ofstream(const char*, std::ios_base::openmode) [with _CharT = char; _Traits = std::char_traits<char>; std::ios_base::openmode = std::_Ios_Openmode]

       basic_ofstream(const char* __s,
       ^

Build Log line 1672

File: /usr/include/c++/4.8.2/fstream Line: 640

/usr/include/c++/4.8.2/fstream:640:7: note:   no known conversion for argument 1 from ‘std::string {aka std::basic_string<char>}’ to ‘const char*’

Build Log line 1673

File: /usr/include/c++/4.8.2/fstream Line: 625

/usr/include/c++/4.8.2/fstream:625:7: note: std::basic_ofstream<_CharT, _Traits>::basic_ofstream() [with _CharT = char; _Traits = std::char_traits<char>]

       basic_ofstream(): __ostream_type(), _M_filebuf()
       ^

Build Log line 1676

File: /usr/include/c++/4.8.2/fstream Line: 625

/usr/include/c++/4.8.2/fstream:625:7: note:   candidate expects 0 arguments, 1 provided

Build Log line 1677

File: /usr/include/c++/4.8.2/fstream Line: 599

/usr/include/c++/4.8.2/fstream:599:11: note: std::basic_ofstream<char>::basic_ofstream(const std::basic_ofstream<char>&)

     class basic_ofstream : public basic_ostream<_CharT,_Traits>
           ^

Build Log line 1680

File: /usr/include/c++/4.8.2/fstream Line: 599

/usr/include/c++/4.8.2/fstream:599:11: note:   no known conversion for argument 1 from ‘std::string {aka std::basic_string<char>}’ to ‘const std::basic_ofstream<char>&’

Linking CXX static library ../../bin/libAVGraphCutLib.a

View Warnings Summary

Test (51 passed, 24 failed, 0 not run)

View Tests Summary