Site Name: ip-172-31-24-227.ec2.internal
Build Name: CIP-Linux-3.10.0-123.8.1.el7.x86_64-x86_64-incr-SL-ON (view notes)
Stamp: 20160725-0400-Nightly (related builds)
Time: 2016-07-25T11:04:35 EDT
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.10.0-123.8.1.el7.x86_64
OS Version: #1 SMP Mon Sep 22 19:06:58 UTC 2014
Compiler Version: unknown
CTest version: ctest-2.8.11

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Stage: Update (0 errors, 0 warnings)

Start Time: 2016-07-25T11:03:56 EDT
End Time: 2016-07-25T11:03:56 EDT
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2016-07-25T11:03:58 EDT
End Time: 2016-07-25T11:04:34 EDT
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/home/centos/Projects/CIP"
Configure Return Value: 0
Configure Output: 
----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
----------- DONE ------------
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull
-- Configuring SEM CLI module: RegisterLungAtlas
-- Configuring SEM CLI module: ResampleLabelMap
-- Configuring SEM CLI module: RescaleLabelMap
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ReadVTKWriteNRRDs
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: FindPatchMatch
-- Configuring SEM CLI module: TransferRegionAndTypeIndicesToFromPoints
-- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric
-- Configuring SEM CLI module: GetTransformationKappa2D
-- Configuring SEM CLI module: GetTransformationKappa
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: ReadVidaWriteCIP
-- Configuring SEM CLI module: RegisterLabelMaps
-- Configuring SEM CLI module: RegisterCT
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue
-- Configuring SEM CLI module: FilterConnectedComponents
-- Configuring SEM CLI module: EnhanceFissuresInImage
-- Configuring SEM CLI module: ComputeFissureFeatureVectors
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring SEM CLI module: GenerateLesionSegmentation
-- Configuring SEM CLI module: RemapLabelMap
-- Configuring SEM CLI module: GenerateNLMFilteredImage
-- Configuring SEM CLI module: ComputeAirwayWallFromParticles
-- Configuring SEM CLI module: RegionTypeLocationsToROIVolume
-- Configuring SEM CLI module: ExtractFissureBoundaryFromLobeMap
-- Configuring SEM CLI module: ExecuteSystemCommand
ChestConventions will not be wrapped. Enable USE_CYTHON to wrap it
-- Configuring done
-- Generating done
-- Build files have been written to: /home/centos/Projects/CIP-build/CIP-build

View Configure Summary

Build (0 errors, 2 warnings)

Build command: /usr/bin/gmake -i
Start Time: 2016-07-25T11:04:35 EDT
End Time: 2016-07-25T13:07:41 EDT

View Errors Summary


Build Warnings (2)
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadElementBase.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadGrav.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadLandmark.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNoisyLandmark.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNode.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadPoint.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialBase.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialLinearElasticity.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMUtility.cxx.o
[ 50%] Building C object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/dsrc2c.c.o

cc1: warning: command line option ‘-fvisibility-inlines-hidden’ is valid for C++/ObjC++ but not for C [enabled by default]

Linking CXX shared library ../../../../lib/libITKFEM-4.10.so
[ 50%] Built target ITKFEM
[ 50%] Built target ITKFEM-all
[ 50%] Built target ITKPDEDeformableRegistration-all
[ 50%] Built target ITKFEMRegistration-all
[ 51%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Utilities/socketxx/socket++/CMakeFiles/gdcmsocketxx.dir/sockstream.cpp.o
[ 51%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Utilities/socketxx/socket++/CMakeFiles/gdcmsocketxx.dir/sockinet.cpp.o
[ 51%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Utilities/socketxx/socket++/CMakeFiles/gdcmsocketxx.dir/fork.cpp.o
[ 51%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Utilities/socketxx/socket++/CMakeFiles/gdcmsocketxx.dir/protocol.cpp.o
[ 51%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Utilities/socketxx/socket++/CMakeFiles/gdcmsocketxx.dir/echo.cpp.o
# All requested packages already installed.
# packages in environment at /.../CIP-build/CIPPython-install:
#
nose                      1.3.7                    py27_1  
[ 86%] Performing installpynrrd step for 'CIPPython'
[ 87%] Performing installpydicom step for 'CIPPython'
[ 88%] Completed 'CIPPython'
[ 88%] Built target CIPPython
[ 90%] Performing configure step for 'CIP'
Not searching for unused variables given on the command line.

Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)Warning: somethings is wrong with binstar_client (No module named binstar_client.utils)loading initial cache file /.../CIP-build/CIP-prefix/tmp/CIP-cache.cmake

----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
----------- DONE ------------
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull

View Warnings Summary


Test (68  passed, 6 failed, 0 not run)
 
View Tests Summary