Site Name: ip-172-31-24-227.ec2.internal
Build Name: CIP-Linux-3.10.0-123.8.1.el7.x86_64-x86_64-incr-SL-ON (view notes)
Stamp: 20160412-0400-Nightly (related builds)
Time: 2016-04-12T00:03:40 EDT
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.10.0-123.8.1.el7.x86_64
OS Version: #1 SMP Mon Sep 22 19:06:58 UTC 2014
Compiler Version: unknown
CTest version: ctest-2.8.11

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Stage: Update (0 errors, 0 warnings)

Start Time: 2016-04-12T00:03:23 EDT
End Time: 2016-04-12T00:03:24 EDT
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 3

Configure (0 errors, 0 warnings)

Start Time: 2016-04-12T00:03:25 EDT
End Time: 2016-04-12T00:03:37 EDT
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/home/centos/Projects/CIP"
Configure Return Value: 0
Configure Output: 
----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
----------- DONE ------------
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull
-- Configuring SEM CLI module: RegisterLungAtlas
-- Configuring SEM CLI module: ResampleLabelMap
-- Configuring SEM CLI module: RescaleLabelMap
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ReadVTKWriteNRRDs
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: FindPatchMatch
-- Configuring SEM CLI module: TransferRegionAndTypeIndicesToFromPoints
-- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateRegionHistogramsAndParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric
-- Configuring SEM CLI module: GetTransformationKappa2D
-- Configuring SEM CLI module: GetTransformationKappa
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: ReadVidaWriteCIP
-- Configuring SEM CLI module: RegisterLabelMaps
-- Configuring SEM CLI module: RegisterCT
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue
-- Configuring SEM CLI module: FilterConnectedComponents
-- Configuring SEM CLI module: EnhanceFissuresInImage
-- Configuring SEM CLI module: ComputeFissureFeatureVectors
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring SEM CLI module: GenerateLesionSegmentation
-- Configuring SEM CLI module: RemapLabelMap
-- Configuring SEM CLI module: GenerateNLMFilteredImage
-- Configuring SEM CLI module: ComputeAirwayWallFromParticles
-- Configuring SEM CLI module: RegionTypeLocationsToROIVolume
-- Configuring SEM CLI module: ExtractFissureBoundaryFromLobeMap
-- Configuring SEM CLI module: ExecuteSystemCommand
Wrapping ChestConventions with Python in /home/centos/Projects/CIP-build/CIPPython-install/bin/python and flags   -fPIC  -Wno-array-bounds -msse2 
-- Configuring done
-- Generating done
-- Build files have been written to: /home/centos/Projects/CIP-build/CIP-build

View Configure Summary

Build (2 errors, 0 warnings)

Build command: /usr/bin/gmake -i
Start Time: 2016-04-12T00:03:40 EDT
End Time: 2016-04-12T00:40:04 EDT

[ 97%] Built target ITKIOSiemens-all
[ 97%] Built target ITKIOStimulate
[ 97%] Built target ITKIOStimulate-all
[ 97%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformFactoryBase.cxx.o
virtual memory exhausted: Cannot allocate memory
[ 97%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformFileReader.cxx.o
[ 97%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformFileWriterSpecializations.cxx.o
[ 97%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformIOBase.cxx.o
[ 97%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformIOFactory.cxx.o
Linking CXX shared library ../../../../lib/libITKIOTransformBase-4.10.so

c++: error: CMakeFiles/ITKIOTransformBase.dir/itkTransformFactoryBase.cxx.o: No such file or directory

[ 97%] Built target ITKIOTransformBase
[ 97%] Built target ITKIOTransformBase-all
Scanning dependencies of target ITKIOTransformHDF5
[ 97%] Building CXX object Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/itkHDF5TransformIO.cxx.o
[ 97%] Building CXX object Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/itkHDF5TransformIOFactory.cxx.o
Linking CXX shared library ../../../../lib/libITKIOTransformHDF5-4.10.so
[ 97%] Built target ITKIOTransformHDF5
[ 97%] Built target ITKIOTransformHDF5-all
Scanning dependencies of target ITKIOTransformInsightLegacy
[ 97%] Building CXX object Modules/IO/TransformInsightLegacy/src/CMakeFiles/ITKIOTransformInsightLegacy.dir/itkTxtTransformIO.cxx.o
[100%] Built target ExecuteSystemCommandLib
Scanning dependencies of target ExecuteSystemCommand
[100%] Building CXX object CommandLineTools/ExecuteSystemCommand/CMakeFiles/ExecuteSystemCommand.dir/.../CIP-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o
Linking CXX executable ../../bin/ExecuteSystemCommand
[100%] Built target ExecuteSystemCommand
Scanning dependencies of target ExecuteSystemCommandTest
[100%] Building CXX object CommandLineTools/ExecuteSystemCommand/CMakeFiles/ExecuteSystemCommandTest.dir/Testing/ExecuteSystemCommandTest.cxx.o
/tmp/ccrNbBd7.s: Assembler messages:
/tmp/ccrNbBd7.s: Fatal error: can't close CMakeFiles/ExecuteSystemCommandTest.dir/Testing/ExecuteSystemCommandTest.cxx.o: No space left on device
Linking CXX executable ../Testing/bin/ExecuteSystemCommandTest

c++: error: CMakeFiles/ExecuteSystemCommandTest.dir/Testing/ExecuteSystemCommandTest.cxx.o: No such file or directory

[100%] Built target ExecuteSystemCommandTest
[ 93%] No install step for 'CIP'
[ 95%] Completed 'CIP'
[100%] Built target CIP

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Build Warnings (0)

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Test (0  passed, 0 failed, 0 not run)
 
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