----------- ENTRY ------------
Configuring Superbuild...
-- SuperBuild - First pass
-- SuperBuild - First pass - done
-- SuperBuild - CIP => Requires CIPPython[INCLUDED], SlicerExecutionModel, VTKv6, ITKv4, Boost[INCLUDED], teem, OpenCV,
-- SuperBuild - SlicerExecutionModel => Requires ITKv4,
-- SuperBuild - ITKv4 => Requires zlib, VTKv6,
CMake Warning (dev) at CMake/ExternalProjectDependency.cmake:338 (if):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "SB_SECOND_PASS" will no longer be dereferenced when
the policy is set to NEW. Since the policy is not set the OLD behavior
will be used.
Call Stack (most recent call first):
CMake/ExternalProjectDependency.cmake:589 (ExternalProject_Message)
SuperBuild/External_zlib.cmake:8 (ExternalProject_Include_Dependencies)
CMake/ExternalProjectDependency.cmake:561 (include)
SuperBuild/External_ITKv4.cmake:11 (ExternalProject_Include_Dependencies)
CMake/ExternalProjectDependency.cmake:561 (include)
SuperBuild/External_SlicerExecutionModel.cmake:8 (ExternalProject_Include_Dependencies)
CMake/ExternalProjectDependency.cmake:561 (include)
CMake/ExternalProjectDependency.cmake:607 (ExternalProject_Include_Dependencies)
SuperBuild.cmake:451 (ExternalProject_Include_Dependencies)
CMakeLists.txt:31 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
-- SuperBuild - zlib[OK]
-- SuperBuild - ZLIB_INCLUDE_DIR:/Users/jonieva/Projects/CIP-master-build/CIP-build/zlib-install/include
-- SuperBuild - ZLIB_LIBRARY:/Users/jonieva/Projects/CIP-master-build/CIP-build/zlib-install/lib/libzlib.a
-- SuperBuild - ZLIB_ROOT:/Users/jonieva/Projects/CIP-master-build/CIP-build/zlib-install
-- SuperBuild - VTKv6 => Requires zlib[INCLUDED],
-- SuperBuild - VTKv6[OK]
-- SuperBuild - PNG_INCLUDE_DIR:/Users/jonieva/Projects/CIP-master-build/CIP-build/VTKv6/Utilities/vtkpng
-- SuperBuild - PNG_LIBRARY:/Users/jonieva/Projects/CIP-master-build/CIP-build/VTKv6-build/bin/libvtkpng.dylib
-- SuperBuild - ITKv4[OK]
-- SuperBuild - SlicerExecutionModel[OK]
-- SuperBuild - teem => Requires zlib[INCLUDED], VTKv6[INCLUDED],
-- SuperBuild - teem[OK]
-- SuperBuild - OpenCV[OK]
-- SuperBuild - CIP[OK]
CMake Warning (dev) at /Applications/CMake.app/Contents/share/cmake-3.4/Modules/ExternalProject.cmake:1126 (if):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "ZLIB_INCLUDE_DIR" will no longer be dereferenced
when the policy is set to NEW. Since the policy is not set the OLD
behavior will be used.
Call Stack (most recent call first):
/Applications/CMake.app/Contents/share/cmake-3.4/Modules/ExternalProject.cmake:2129 (_ep_command_line_to_initial_cache)
/Applications/CMake.app/Contents/share/cmake-3.4/Modules/ExternalProject.cmake:2433 (_ep_add_configure_command)
SuperBuild.cmake:457 (ExternalProject_Add)
CMakeLists.txt:31 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
----------- DONE ------------
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/jonieva/Projects/CIP-master-build/CIP-build
CMake Warning (dev) at Utilities/KWSys/vtksys/CMakeLists.txt:267 (CONFIGURE_FILE):
configure_file called with unknown argument(s):
COPY_ONLY
This warning is for project developers. Use -Wno-dev to suppress it.
-- Checking whether header cstdio is available
-- Checking whether header cstdio is available - yes
-- Checking for Large File Support
-- Checking for Large File Support - yes
-- Checking whether backtrace works with this C++ compiler
-- Checking whether backtrace works with this C++ compiler - yes
-- Looking for C++ include dlfcn.h
-- Looking for C++ include dlfcn.h - found
-- Checking whether dladdr works with this C++ compiler
-- Checking whether dladdr works with this C++ compiler - yes
-- Looking for C++ include cxxabi.h
-- Looking for C++ include cxxabi.h - found
-- Checking whether cxxabi works with this C++ compiler
-- Checking whether cxxabi works with this C++ compiler - yes
CMake Warning (dev) at Common/Core/CMakeLists.txt:70 (configure_file):
configure_file called with unknown argument(s):
COPY_ONLY
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at Common/Core/CMakeLists.txt:73 (configure_file):
configure_file called with unknown argument(s):
COPY_ONLY
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at Common/Core/CMakeLists.txt:76 (configure_file):
configure_file called with unknown argument(s):
COPY_ONLY
This warning is for project developers. Use -Wno-dev to suppress it.
-- Performing Test VTK_HAS_STD_ISNAN
-- Performing Test VTK_HAS_STD_ISNAN - Success
-- Performing Test VTK_HAS_STD_ISINF
-- Performing Test VTK_HAS_STD_ISINF - Success
-- Looking for fstat64
-- Looking for fstat64 - found
-- Looking for stat64
-- Looking for stat64 - found
-- Looking for tzname
-- Looking for tzname - found
-- Looking for TIOCGWINSZ
-- Looking for TIOCGWINSZ - found
-- Looking for TIOCGETD
-- Looking for TIOCGETD - found
CMake Warning (dev) at ThirdParty/hdf5/vtkhdf5/ConfigureChecks.cmake:450 (IF):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "H5_HAVE_SYS_TIME_H" will no longer be dereferenced
when the policy is set to NEW. Since the policy is not set the OLD
behavior will be used.
Call Stack (most recent call first):
ThirdParty/hdf5/vtkhdf5/ConfigureChecks.cmake:511 (HDF5_FUNCTION_TEST)
-- Performing Other Test TIME_WITH_SYS_TIME - Success
-- Performing Other Test STDC_HEADERS - Success
-- Performing Other Test HAVE_TM_ZONE - Success
-- Performing Other Test HAVE_STRUCT_TM_TM_ZONE - Success
-- Performing Other Test HAVE_ATTRIBUTE - Success
-- Performing Other Test HAVE_FUNCTION - Success
-- Performing Other Test HAVE_TM_GMTOFF - Success
-- Performing Other Test HAVE_STRUCT_TIMEZONE - Failed
-- Performing Other Test HAVE_STAT_ST_BLOCKS - Success
CMake Warning (dev) at ThirdParty/hdf5/vtkhdf5/ConfigureChecks.cmake:433 (IF):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "H5_HAVE_FUNCTION" will no longer be dereferenced
when the policy is set to NEW. Since the policy is not set the OLD
behavior will be used.
Call Stack (most recent call first):
ThirdParty/hdf5/vtkhdf5/ConfigureChecks.cmake:511 (HDF5_FUNCTION_TEST)
[ 0%] Building CXX object Utilities/KWSys/vtksys/CMakeFiles/vtksys.dir/Directory.cxx.o
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ld: warning: object file (CMakeFiles/vtksys.dir/ProcessUNIX.c.o) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (CMakeFiles/vtksys.dir/Base64.c.o) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (CMakeFiles/vtksys.dir/EncodingC.c.o) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (CMakeFiles/vtksys.dir/MD5.c.o) was built for newer OSX version (10.11) than being linked (10.6)
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/.../CIP-master-build/VTKv6/Common/Math/vtkPolynomialSolversUnivariate.cxx:814:7: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'? [-Wmismatched-new-delete]
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/.../CIP-master-build/VTKv6/Common/DataModel/vtkGenericAttributeCollection.cxx:456:44: warning: comparison of array 'this->AttributesToInterpolate' not equal to a null pointer is always true [-Wtautological-pointer-compare]
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk/usr/include/assert.h:93:25: note: expanded from macro 'assert'
(__builtin_expect(!(e), 0) ? __assert_rtn(__func__, __FILE__, __LINE__, #e) : (void)0)
^
1 warning generated.
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ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(compress.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(uncompr.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(deflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(trees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(adler32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(crc32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inffast.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inftrees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(zutil.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
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ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(trees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(adler32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(compress.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inffast.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inftrees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(zutil.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
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[ 53%] Building CXX object IO/Image/CMakeFiles/vtkIOImage.dir/vtkVolume16Reader.cxx.o
[ 53%] Building CXX object IO/Image/CMakeFiles/vtkIOImage.dir/vtkVolumeReader.cxx.o
[ 53%] Linking CXX shared library ../../lib/libvtkIOImage-6.2.dylib
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(gzio.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
[ 53%] Built target vtkIOImage
Scanning dependencies of target vtkImagingHybrid
[ 53%] Building CXX object Imaging/Hybrid/CMakeFiles/vtkImagingHybrid.dir/vtkBooleanTexture.cxx.o
[ 53%] Building CXX object Imaging/Hybrid/CMakeFiles/vtkImagingHybrid.dir/vtkShepardMethod.cxx.o
[ 53%] Building CXX object Imaging/Hybrid/CMakeFiles/vtkImagingHybrid.dir/vtkVoxelModeller.cxx.o
[ 53%] Building CXX object Imaging/Hybrid/CMakeFiles/vtkImagingHybrid.dir/vtkSurfaceReconstructionFilter.cxx.o
[ 53%] Building CXX object Imaging/Hybrid/CMakeFiles/vtkImagingHybrid.dir/vtkFastSplatter.cxx.o
[ 53%] Building CXX object Imaging/Hybrid/CMakeFiles/vtkImagingHybrid.dir/vtkGaussianSplatter.cxx.o
[ 53%] Building CXX object Imaging/Hybrid/CMakeFiles/vtkImagingHybrid.dir/vtkSampleFunction.cxx.o
[ 53%] Building CXX object Imaging/Hybrid/CMakeFiles/vtkImagingHybrid.dir/vtkPointLoad.cxx.o
[ 85%] Building CXX object Rendering/GL2PS/CMakeFiles/vtkRenderingGL2PS.dir/vtkGL2PSContextDevice2D.cxx.o
[ 85%] Building CXX object Rendering/GL2PS/CMakeFiles/vtkRenderingGL2PS.dir/vtkGL2PSUtilities.cxx.o
[ 85%] Linking CXX shared library ../../lib/libvtkRenderingGL2PS-6.2.dylib
[ 85%] Built target vtkRenderingGL2PS
Scanning dependencies of target vtkRenderingLabel
[ 85%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabeledDataMapper.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabeledTreeMapDataMapper.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabelHierarchyAlgorithm.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabelHierarchyCompositeIterator.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabelHierarchy.cxx.o
/.../CIP-master-build/VTKv6/Rendering/Label/vtkLabelHierarchy.cxx:887:10: warning: reference cannot be bound to dereferenced null pointer in well-defined C++ code; pointer may be assumed to always convert to true [-Wundefined-bool-conversion]
if ( &(this->Node->value()) )
~~ ~^~~~~~~~~~~~~~~~~~~~
/.../CIP-master-build/VTKv6/Rendering/Label/vtkLabelHierarchy.cxx:1231:10: warning: reference cannot be bound to dereferenced null pointer in well-defined C++ code; pointer may be assumed to always convert to true [-Wundefined-bool-conversion]
if ( &(this->Node->value()) )
~~ ~^~~~~~~~~~~~~~~~~~~~
/.../CIP-master-build/VTKv6/Rendering/Label/vtkLabelHierarchy.cxx:1589:10: warning: reference cannot be bound to dereferenced null pointer in well-defined C++ code; pointer may be assumed to always convert to true [-Wundefined-bool-conversion]
if ( &(this->Cursor->value()) )
~~ ~^~~~~~~~~~~~~~~~~~~~~~
/.../CIP-master-build/VTKv6/Utilities/octree/octree_node.h:48:13: note: 'value' returns a reference
reference value() { return this->_M_data; }
^
3 warnings generated.
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabelHierarchyIterator.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabelPlacementMapper.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabelPlacer.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabelRenderStrategy.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkLabelSizeCalculator.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkFreeTypeLabelRenderStrategy.cxx.o
[ 86%] Building CXX object Rendering/Label/CMakeFiles/vtkRenderingLabel.dir/vtkDynamic2DLabelMapper.cxx.o
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found X11: /opt/X11/lib/libX11.dylib
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE
-- Check the value of the 22nd bit of a 32-bit quiet-NaN
-- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1
-- Found ZLIB: /.../CIP-master-build/zlib-install/lib/libzlib.a (found version "1.2.3")
CMake Warning (dev) at CMakeLists.txt:451 (EXPORT_LIBRARY_DEPENDENCIES):
Policy CMP0033 is not set: The export_library_dependencies command should
not be called. Run "cmake --help-policy CMP0033" for policy details. Use
the cmake_policy command to set the policy and suppress this warning.
This warning is for project developers. Use -Wno-dev to suppress it.
-- Configuring done
-- Generating done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake
--help-policy CMP0042" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
MACOSX_RPATH is not specified for the following targets:
teem
This warning is for project developers. Use -Wno-dev to suppress it.
[ 10%] Building C object CMakeFiles/teem.dir/src/nrrd/formatNRRD.o
[ 10%] Building C object CMakeFiles/teem.dir/src/nrrd/formatPNG.o
[ 11%] Building C object CMakeFiles/teem.dir/src/nrrd/formatPNM.o
[ 11%] Building C object CMakeFiles/teem.dir/src/nrrd/formatText.o
[ 11%] Building C object CMakeFiles/teem.dir/src/nrrd/formatVTK.o
[ 11%] Building C object CMakeFiles/teem.dir/src/nrrd/gzio.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/hestNrrd.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/histogram.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/iter.o
[ 12%] Building C object CMakeFiles/teem.dir/src/nrrd/kernel.o
/.../CIP-master-build/teem/src/nrrd/kernel.c:3264:25: warning: address of array 'kernA->name' will always evaluate to 'true' [-Wpointer-bool-conversion]
/.../CIP-master-build/teem/src/nrrd/kernel.c:3385:15: warning: address of array 'kern->name' will always evaluate to 'true' [-Wpointer-bool-conversion]
if (!(kern->name && kern->support && kern->integral
~~~~~~^~~~ ~~
/.../CIP-master-build/teem/src/nrrd/kernel.c:3389:23: warning: address of array 'kern->name' will always evaluate to 'true' [-Wpointer-bool-conversion]
!!(kern->name), !!(kern->support), !!(kern->integral),
~ ~~~~~~^~~~
3 warnings generated.
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/keyvalue.o
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/map.o
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/measure.o
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/methodsNrrd.o
[ 13%] Building C object CMakeFiles/teem.dir/src/nrrd/parseNrrd.o
[ 14%] Building C object CMakeFiles/teem.dir/src/nrrd/range.o
[ 14%] Building C object CMakeFiles/teem.dir/src/nrrd/read.o
[ 41%] Building C object CMakeFiles/teem.dir/src/gage/print.o
[ 41%] Building C object CMakeFiles/teem.dir/src/gage/pvl.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/scl.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/sclanswer.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/sclfilter.o
[ 42%] Building C object CMakeFiles/teem.dir/src/gage/sclprint.o
[ 43%] Building C object CMakeFiles/teem.dir/src/gage/shape.o
[ 43%] Building C object CMakeFiles/teem.dir/src/gage/st.o
[ 43%] Building C object CMakeFiles/teem.dir/src/gage/stack.o
[ 43%] Building C object CMakeFiles/teem.dir/src/gage/stackBlur.o
/.../CIP-master-build/teem/src/gage/stackBlur.c:505:7: warning: logical not is only applied to the left hand side of this comparison [-Wlogical-not-parentheses]
/.../CIP-master-build/teem/src/gage/stackBlur.c:505:7: note: add parentheses around left hand side expression to silence this warning
if (!dgGoodSigmaMax > 0) {
^
( )
1 warning generated.
[ 44%] Building C object CMakeFiles/teem.dir/src/gage/update.o
[ 44%] Building C object CMakeFiles/teem.dir/src/gage/vecGage.o
[ 44%] Building C object CMakeFiles/teem.dir/src/gage/vecprint.o
[ 44%] Building C object CMakeFiles/teem.dir/src/gage/optimsig.o
[ 44%] Building C object CMakeFiles/teem.dir/src/dye/convertDye.o
[ 45%] Building C object CMakeFiles/teem.dir/src/dye/methodsDye.o
[ 87%] Building C object CMakeFiles/teem.dir/src/mite/defaultsMite.o
[ 87%] Building C object CMakeFiles/teem.dir/src/mite/kindnot.o
[ 87%] Building C object CMakeFiles/teem.dir/src/mite/ray.o
[ 87%] Building C object CMakeFiles/teem.dir/src/mite/renderMite.o
[ 88%] Building C object CMakeFiles/teem.dir/src/mite/shade.o
[ 88%] Building C object CMakeFiles/teem.dir/src/mite/thread.o
[ 88%] Building C object CMakeFiles/teem.dir/src/mite/txf.o
[ 88%] Building C object CMakeFiles/teem.dir/src/mite/user.o
[ 89%] Building C object CMakeFiles/teem.dir/src/meet/enumall.o
[ 89%] Building C object CMakeFiles/teem.dir/src/meet/meetNrrd.o
/.../CIP-master-build/teem/src/meet/meetNrrd.c:390:21: warning: address of array 'kk->name' will always evaluate to 'true' [-Wpointer-bool-conversion]
kk->name ? kk->name : "(NULL name)");
~~~~^~~~ ~
1 warning generated.
[ 89%] Building C object CMakeFiles/teem.dir/src/meet/meetGage.o
[ 89%] Building C object CMakeFiles/teem.dir/src/meet/meetPull.o
[ 90%] Linking C shared library bin/libteem.dylib
[ 90%] Built target teem
Scanning dependencies of target airSanity
[ 90%] Building C object src/bin/CMakeFiles/airSanity.dir/airSanity.o
[ 90%] Linking C executable ../../bin/airSanity
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
CMake Warning (dev) at cmake/OpenCVUtils.cmake:279 (if):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "APPLE" will no longer be dereferenced when the
policy is set to NEW. Since the policy is not set the OLD behavior will be
used.
Call Stack (most recent call first):
CMakeLists.txt:120 (OCV_OPTION)
-- Module opencv_highgui disabled because opencv_videoio dependency can't be resolved!
-- Module opencv_shape disabled because opencv_video dependency can't be resolved!
-- Module opencv_stitching disabled because opencv_calib3d dependency can't be resolved!
-- Module opencv_superres disabled because opencv_video dependency can't be resolved!
-- Module opencv_ts disabled because opencv_videoio dependency can't be resolved!
-- Assume that non-module dependency is available: -framework OpenCL (for module opencv_core)
-- Performing Test HAVE_OBJCXX_FOBJC_EXCEPTIONS
-- Performing Test HAVE_OBJCXX_FOBJC_EXCEPTIONS - Success
-- Performing Test HAVE_CXX_WNO_DEPRECATED_DECLARATIONS
-- Performing Test HAVE_CXX_WNO_DEPRECATED_DECLARATIONS - Success
CMake Warning (dev) at cmake/OpenCVGenPkgconfig.cmake:40 (get_target_property):
Policy CMP0026 is not set: Disallow use of the LOCATION target property.
Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The LOCATION property should not be read from target "opencv_core". Use
the target name directly with add_custom_command, or use the generator
expression $<TARGET_FILE>, as appropriate.
Call Stack (most recent call first):
CMakeLists.txt:576 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/OpenCVGenPkgconfig.cmake:40 (get_target_property):
Policy CMP0026 is not set: Disallow use of the LOCATION target property.
Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The LOCATION property should not be read from target "opencv_features2d".
Use the target name directly with add_custom_command, or use the generator
expression $<TARGET_FILE>, as appropriate.
Call Stack (most recent call first):
CMakeLists.txt:576 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/OpenCVGenPkgconfig.cmake:40 (get_target_property):
Policy CMP0026 is not set: Disallow use of the LOCATION target property.
Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The LOCATION property should not be read from target "opencv_flann". Use
the target name directly with add_custom_command, or use the generator
expression $<TARGET_FILE>, as appropriate.
Call Stack (most recent call first):
CMakeLists.txt:576 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/OpenCVGenPkgconfig.cmake:40 (get_target_property):
Policy CMP0026 is not set: Disallow use of the LOCATION target property.
Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The LOCATION property should not be read from target "opencv_imgcodecs".
Use the target name directly with add_custom_command, or use the generator
expression $<TARGET_FILE>, as appropriate.
Call Stack (most recent call first):
CMakeLists.txt:576 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/OpenCVGenPkgconfig.cmake:40 (get_target_property):
Policy CMP0026 is not set: Disallow use of the LOCATION target property.
Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The LOCATION property should not be read from target "opencv_imgproc". Use
the target name directly with add_custom_command, or use the generator
expression $<TARGET_FILE>, as appropriate.
Call Stack (most recent call first):
CMakeLists.txt:576 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/OpenCVGenPkgconfig.cmake:40 (get_target_property):
Policy CMP0026 is not set: Disallow use of the LOCATION target property.
Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The LOCATION property should not be read from target "opencv_ml". Use the
target name directly with add_custom_command, or use the generator
expression $<TARGET_FILE>, as appropriate.
Call Stack (most recent call first):
CMakeLists.txt:576 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/OpenCVGenPkgconfig.cmake:40 (get_target_property):
Policy CMP0026 is not set: Disallow use of the LOCATION target property.
Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The LOCATION property should not be read from target "opencv_objdetect".
Use the target name directly with add_custom_command, or use the generator
expression $<TARGET_FILE>, as appropriate.
Call Stack (most recent call first):
CMakeLists.txt:576 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at cmake/OpenCVGenPkgconfig.cmake:40 (get_target_property):
Policy CMP0026 is not set: Disallow use of the LOCATION target property.
Run "cmake --help-policy CMP0026" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The LOCATION property should not be read from target "opencv_photo". Use
the target name directly with add_custom_command, or use the generator
expression $<TARGET_FILE>, as appropriate.
Call Stack (most recent call first):
CMakeLists.txt:576 (include)
-- Performance tests: NO
-- C/C++ Examples: NO
--
-- Install path: /.../CIP-master-build/OpenCV-install
--
-- cvconfig.h is in: /.../CIP-master-build/OpenCV-build
-- -----------------------------------------------------------------
--
-- Configuring done
-- Generating done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake
--help-policy CMP0042" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
MACOSX_RPATH is not specified for the following targets:
opencv_core
opencv_features2d
opencv_flann
opencv_imgcodecs
Scanning dependencies of target zlib
[ 0%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/adler32.c.o
[ 1%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/compress.c.o
[ 1%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/crc32.c.o
[ 1%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/deflate.c.o
[ 1%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/gzclose.c.o
[ 1%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/gzlib.c.o
[ 2%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/gzread.c.o
[ 2%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/gzwrite.c.o
[ 2%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/inflate.c.o
/.../CIP-master-build/OpenCV/3rdparty/zlib/inflate.c:1507:61: warning: shifting a negative signed value is undefined [-Wshift-negative-value]
if (strm == Z_NULL || strm->state == Z_NULL) return -1L << 16;
~~~ ^
1 warning generated.
[ 2%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/infback.c.o
[ 2%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/inftrees.c.o
[ 3%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/inffast.c.o
[ 3%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/trees.c.o
[ 3%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/uncompr.c.o
[ 3%] Building C object 3rdparty/zlib/CMakeFiles/zlib.dir/zutil.c.o
[ 4%] Linking C static library ../lib/libzlib.a
[ 11%] Building C object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_swab.c.o
[ 11%] Building C object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_thunder.c.o
[ 11%] Building C object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_tile.c.o
[ 12%] Building C object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_version.c.o
[ 12%] Building C object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_warning.c.o
[ 12%] Building C object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_write.c.o
[ 12%] Building C object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_zip.c.o
[ 13%] Building CXX object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_stream.cxx.o
[ 13%] Building C object 3rdparty/libtiff/CMakeFiles/libtiff.dir/tif_unix.c.o
[ 13%] Linking CXX static library ../lib/liblibtiff.a
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_jbig.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_jpeg_12.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_jpeg.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_lzma.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_ojpeg.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_jbig.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_jpeg_12.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_jpeg.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_lzma.c.o) has no symbols
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../lib/liblibtiff.a(tif_ojpeg.c.o) has no symbols
[ 13%] Built target libtiff
Scanning dependencies of target libjpeg
[ 13%] Building C object 3rdparty/libjpeg/CMakeFiles/libjpeg.dir/jaricom.c.o
[ 13%] Building C object 3rdparty/libjpeg/CMakeFiles/libjpeg.dir/jcapimin.c.o
[ 13%] Building C object 3rdparty/libjpeg/CMakeFiles/libjpeg.dir/jcapistd.c.o
[ 14%] Building C object 3rdparty/libjpeg/CMakeFiles/libjpeg.dir/jcarith.c.o
[ 14%] Building C object 3rdparty/libjpeg/CMakeFiles/libjpeg.dir/jccoefct.c.o
[ 14%] Building C object 3rdparty/libjpeg/CMakeFiles/libjpeg.dir/jccolor.c.o
[ 14%] Building C object 3rdparty/libjpeg/CMakeFiles/libjpeg.dir/jcdctmgr.c.o
[ 15%] Building C object 3rdparty/libjpeg/CMakeFiles/libjpeg.dir/jchuff.c.o
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk/usr/include/sys/semaphore.h:55:5: note: 'sem_init' has been explicitly marked deprecated here
int sem_init(sem_t *, int, unsigned int) __deprecated;
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk/usr/include/sys/semaphore.h:53:5: note: 'sem_destroy' has been explicitly marked deprecated here
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk/usr/include/sys/semaphore.h:54:5: note: 'sem_getvalue' has been explicitly marked deprecated here
int sem_getvalue(sem_t * __restrict, int * __restrict) __deprecated;
^
3 warnings generated.
[ 48%] Building CXX object 3rdparty/openexr/CMakeFiles/IlmImf.dir/IlmThread/IlmThreadSemaphorePosixCompat.cpp.o
[ 48%] Building CXX object 3rdparty/openexr/CMakeFiles/IlmImf.dir/Imath/ImathColorAlgo.cpp.o
[ 48%] Building CXX object 3rdparty/openexr/CMakeFiles/IlmImf.dir/Imath/ImathFun.cpp.o
[ 48%] Building CXX object 3rdparty/openexr/CMakeFiles/IlmImf.dir/Imath/ImathMatrixAlgo.cpp.o
[ 49%] Building CXX object 3rdparty/openexr/CMakeFiles/IlmImf.dir/Imath/ImathRandom.cpp.o
[ 49%] Building CXX object 3rdparty/openexr/CMakeFiles/IlmImf.dir/Imath/ImathVec.cpp.o
[ 49%] Building CXX object 3rdparty/openexr/CMakeFiles/IlmImf.dir/IlmImf/ImfAcesFile.cpp.o
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[ 62%] Built target IlmImf
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/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2354:50: warning: taking the absolute value of unsigned type 'const unsigned char' has no effect [-Wabsolute-value]
result = std::max(result, ST(std::abs(src[k])));
^
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2485:1: note: in instantiation of function template specialization 'cv::normInf_<unsigned char, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2354:50: note: remove the call to 'std::abs' since unsigned values cannot be negative
result = std::max(result, ST(std::abs(src[k])));
^~~~~~~~
In file included from /.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:43:
In file included from /.../CIP-master-build/OpenCV/modules/core/src/precomp.hpp:49:
In file included from /.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/utility.hpp:51:
In file included from /.../CIP-master-build/OpenCV/modules/core/include/opencv2/core.hpp:52:
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:415:33: warning: taking the absolute value of unsigned type 'const unsigned char' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2346:35: note: in instantiation of function template specialization 'cv::normInf<unsigned char, int>' requested here
result = std::max(result, normInf<T, ST>(src, len*cn));
^
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2485:1: note: in instantiation of function template specialization 'cv::normInf_<unsigned char, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:415:33: note: remove the call to 'std::abs' since unsigned values cannot be negative
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2375:31: warning: taking the absolute value of unsigned type 'const unsigned char' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2485:1: note: in instantiation of function template specialization 'cv::normL1_<unsigned char, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2375:31: note: remove the call to 'std::abs' since unsigned values cannot be negative
result += std::abs(src[k]);
^~~~~~~~
In file included from /.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:43:
In file included from /.../CIP-master-build/OpenCV/modules/core/src/precomp.hpp:49:
In file included from /.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/utility.hpp:51:
In file included from /.../CIP-master-build/OpenCV/modules/core/include/opencv2/core.hpp:52:
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:401:22: warning: taking the absolute value of unsigned type 'const unsigned char' has no effect [-Wabsolute-value]
s += (_AccTp)std::abs(a[i]) + (_AccTp)std::abs(a[i+1]) +
^
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2367:19: note: in instantiation of function template specialization 'cv::normL1<unsigned char, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2485:1: note: in instantiation of function template specialization 'cv::normL1_<unsigned char, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:401:22: note: remove the call to 'std::abs' since unsigned values cannot be negative
s += (_AccTp)std::abs(a[i]) + (_AccTp)std::abs(a[i+1]) +
^~~~~~~~
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:401:47: warning: taking the absolute value of unsigned type 'const unsigned char' has no effect [-Wabsolute-value]
s += (_AccTp)std::abs(a[i]) + (_AccTp)std::abs(a[i+1]) +
^
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:401:47: note: remove the call to 'std::abs' since unsigned values cannot be negative
s += (_AccTp)std::abs(a[i]) + (_AccTp)std::abs(a[i+1]) +
^~~~~~~~
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:402:21: warning: taking the absolute value of unsigned type 'const unsigned char' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:402:21: note: remove the call to 'std::abs' since unsigned values cannot be negative
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:402:48: warning: taking the absolute value of unsigned type 'const unsigned char' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:402:48: note: remove the call to 'std::abs' since unsigned values cannot be negative
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:406:14: warning: taking the absolute value of unsigned type 'const unsigned char' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:406:14: note: remove the call to 'std::abs' since unsigned values cannot be negative
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2354:50: warning: taking the absolute value of unsigned type 'const unsigned short' has no effect [-Wabsolute-value]
result = std::max(result, ST(std::abs(src[k])));
^
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2487:1: note: in instantiation of function template specialization 'cv::normInf_<unsigned short, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2354:50: note: remove the call to 'std::abs' since unsigned values cannot be negative
result = std::max(result, ST(std::abs(src[k])));
^~~~~~~~
In file included from /.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:43:
In file included from /.../CIP-master-build/OpenCV/modules/core/src/precomp.hpp:49:
In file included from /.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/utility.hpp:51:
In file included from /.../CIP-master-build/OpenCV/modules/core/include/opencv2/core.hpp:52:
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:415:33: warning: taking the absolute value of unsigned type 'const unsigned short' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2346:35: note: in instantiation of function template specialization 'cv::normInf<unsigned short, int>' requested here
result = std::max(result, normInf<T, ST>(src, len*cn));
^
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2487:1: note: in instantiation of function template specialization 'cv::normInf_<unsigned short, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:415:33: note: remove the call to 'std::abs' since unsigned values cannot be negative
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2375:31: warning: taking the absolute value of unsigned type 'const unsigned short' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2487:1: note: in instantiation of function template specialization 'cv::normL1_<unsigned short, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2375:31: note: remove the call to 'std::abs' since unsigned values cannot be negative
result += std::abs(src[k]);
^~~~~~~~
In file included from /.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:43:
In file included from /.../CIP-master-build/OpenCV/modules/core/src/precomp.hpp:49:
In file included from /.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/utility.hpp:51:
In file included from /.../CIP-master-build/OpenCV/modules/core/include/opencv2/core.hpp:52:
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:401:22: warning: taking the absolute value of unsigned type 'const unsigned short' has no effect [-Wabsolute-value]
s += (_AccTp)std::abs(a[i]) + (_AccTp)std::abs(a[i+1]) +
^
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2367:19: note: in instantiation of function template specialization 'cv::normL1<unsigned short, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/src/stat.cpp:2487:1: note: in instantiation of function template specialization 'cv::normL1_<unsigned short, int>' requested here
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:401:22: note: remove the call to 'std::abs' since unsigned values cannot be negative
s += (_AccTp)std::abs(a[i]) + (_AccTp)std::abs(a[i+1]) +
^~~~~~~~
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:401:47: warning: taking the absolute value of unsigned type 'const unsigned short' has no effect [-Wabsolute-value]
s += (_AccTp)std::abs(a[i]) + (_AccTp)std::abs(a[i+1]) +
^
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:401:47: note: remove the call to 'std::abs' since unsigned values cannot be negative
s += (_AccTp)std::abs(a[i]) + (_AccTp)std::abs(a[i+1]) +
^~~~~~~~
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:402:21: warning: taking the absolute value of unsigned type 'const unsigned short' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:402:21: note: remove the call to 'std::abs' since unsigned values cannot be negative
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:402:48: warning: taking the absolute value of unsigned type 'const unsigned short' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:402:48: note: remove the call to 'std::abs' since unsigned values cannot be negative
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:406:14: warning: taking the absolute value of unsigned type 'const unsigned short' has no effect [-Wabsolute-value]
/.../CIP-master-build/OpenCV/modules/core/include/opencv2/core/base.hpp:406:14: note: remove the call to 'std::abs' since unsigned values cannot be negative
s += std::abs(a[i]);
^~~~~~~~
16 warnings generated.
[ 70%] Building CXX object modules/core/CMakeFiles/opencv_core.dir/src/stl.cpp.o
[ 70%] Building CXX object modules/core/CMakeFiles/opencv_core.dir/src/system.cpp.o
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[ 72%] Linking CXX shared library ../../lib/libopencv_core.dylib
-- Enabled ITKVNL, requested by ITK_BUILD_DEFAULT_MODULES.
-- Enabled ITKVNLInstantiation, requested by ITK_BUILD_DEFAULT_MODULES.
-- Enabled ITKVTK, requested by ITK_BUILD_DEFAULT_MODULES.
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CMake Warning (dev) at Modules/ThirdParty/KWSys/src/KWSys/CMakeLists.txt:267 (CONFIGURE_FILE):
configure_file called with unknown argument(s):
COPY_ONLY
This warning is for project developers. Use -Wno-dev to suppress it.
-- Checking whether header cstdio is available
-- Checking whether header cstdio is available - yes
-- Checking for Large File Support
-- Checking for Large File Support - yes
-- Checking whether backtrace works with this C++ compiler
-- Checking whether backtrace works with this C++ compiler - yes
-- Looking for C++ include dlfcn.h
-- Looking for C++ include dlfcn.h - found
-- Checking whether dladdr works with this C++ compiler
-- Checking whether dladdr works with this C++ compiler - yes
-- Looking for C++ include cxxabi.h
-- Looking for C++ include cxxabi.h - found
-- Checking whether cxxabi works with this C++ compiler
-- Checking whether cxxabi works with this C++ compiler - yes
CMake Warning (dev) at Modules/ThirdParty/VNL/src/vxl/config/cmake/config/vxl_config_macros.cmake:15 (IF):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "VCL_HAS_BOOL" will no longer be dereferenced when
the policy is set to NEW. Since the policy is not set the OLD behavior
will be used.
Call Stack (most recent call first):
Modules/ThirdParty/VNL/src/vxl/config/cmake/config/CMakeLists.txt:51 (PERFORM_CMAKE_TEST)
-- Performing Test VCL_CAN_DO_NON_TYPE_FUNCTION_TEMPLATE_PARAMETER
-- Performing Test VCL_CAN_DO_NON_TYPE_FUNCTION_TEMPLATE_PARAMETER - Success
-- Performing Test VCL_NEED_FRIEND_FOR_TEMPLATE_OVERLOAD
-- Performing Test VCL_NEED_FRIEND_FOR_TEMPLATE_OVERLOAD - Success
-- Performing Test VCL_OVERLOAD_CAST
-- Performing Test VCL_OVERLOAD_CAST - Failed
-- Performing Test VCL_NULL_TMPL_ARGS
-- Performing Test VCL_NULL_TMPL_ARGS - Failed
-- Performing Test VCL_NO_STATIC_DATA_MEMBERS
-- Performing Test VCL_NO_STATIC_DATA_MEMBERS - Success
CMake Warning (dev) at Modules/ThirdParty/VNL/src/vxl/config/cmake/config/vxl_config_macros.cmake:106 (IF):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "VCL_HAS_TEMPLATE_SYMBOLS" will no longer be
dereferenced when the policy is set to NEW. Since the policy is not set
the OLD behavior will be used.
Call Stack (most recent call first):
Modules/ThirdParty/VNL/src/vxl/config/cmake/config/CMakeLists.txt:81 (PERFORM_CMAKE_TEST_RUN)
-- Performing Test VXL_HAS_DBGHELP_H
-- Performing Test VXL_HAS_DBGHELP_H - Failed
-- Performing Test VCL_DEFINE_SPECIALIZATION
-- Performing Test VCL_DEFINE_SPECIALIZATION - Success
-- Performing Test VCL_CANNOT_SPECIALIZE_CV
-- Performing Test VCL_CANNOT_SPECIALIZE_CV - Success
-- Performing Test VXL_APPLE_HAS_ISNAND
-- Performing Test VXL_APPLE_HAS_ISNAND - Failed
-- Performing Test VXL_APPLE_HAS_INLINE_ISNAND
-- Performing Test VXL_APPLE_HAS_INLINE_ISNAND - Success
CMake Warning (dev) at Modules/ThirdParty/VNL/src/vxl/config/cmake/config/vxl_config_macros.cmake:62 (IF):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "VXL_PIC_COMPATIBLE" will no longer be dereferenced
when the policy is set to NEW. Since the policy is not set the OLD
behavior will be used.
Call Stack (most recent call first):
Modules/ThirdParty/VNL/src/vxl/config/cmake/config/CMakeLists.txt:136 (PERFORM_CMAKE_TEST_CUSTOM)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Performing Test VXL_PIC_COMPATIBLE
-- Performing Test VXL_PIC_COMPATIBLE - Success
-- Looking for C++ include cassert
-- Looking for C++ include cassert - found
CMake Warning (dev) at Modules/ThirdParty/VNL/src/vxl/config/cmake/config/vxl_config_macros.cmake:160 (IF):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "VCL_CXX_HAS_HEADER_CASSERT" will no longer be
dereferenced when the policy is set to NEW. Since the policy is not set
the OLD behavior will be used.
Call Stack (most recent call first):
Modules/ThirdParty/VNL/src/vxl/config/cmake/config/CMakeLists.txt:142 (PERFORM_CHECK_HEADER)
-- Looking for C++ include semaphore.h
-- Looking for C++ include semaphore.h - found
-- Looking for C++ include ieeefp.h
-- Looking for C++ include ieeefp.h - not found
-- Looking for C++ include iso646.h
-- Looking for C++ include iso646.h - found
-- Looking for C++ include emmintrin.h
-- Looking for C++ include emmintrin.h - found
-- Looking for C++ include tr1/memory
-- Looking for C++ include tr1/memory - found
CMake Warning (dev) at Modules/ThirdParty/VNL/src/vxl/config/cmake/config/vxl_config_macros.cmake:200 (IF):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "VCL_MEMORY_HAS_SHARED_PTR" will no longer be
dereferenced when the policy is set to NEW. Since the policy is not set
the OLD behavior will be used.
Call Stack (most recent call first):
Modules/ThirdParty/VNL/src/vxl/config/cmake/config/vxl_config_macros.cmake:253 (CHECK_TYPE_EXISTS)
-- Looking for TIOCGETD - found
-- Performing Other Test TIME_WITH_SYS_TIME - Success
-- Performing Other Test STDC_HEADERS - Success
-- Performing Other Test HAVE_TM_ZONE - Success
-- Performing Other Test HAVE_STRUCT_TM_TM_ZONE - Success
-- Performing Other Test HAVE_ATTRIBUTE - Success
-- Performing Other Test HAVE_FUNCTION - Success
-- Performing Other Test HAVE_TM_GMTOFF - Success
-- Performing Other Test HAVE_STRUCT_TIMEZONE - Success
-- Performing Other Test HAVE_STAT_ST_BLOCKS - Success
CMake Warning (dev) at Modules/ThirdParty/HDF5/src/itkhdf5/config/cmake/ConfigureChecks.cmake:503 (IF):
Policy CMP0054 is not set: Only interpret if() arguments as variables or
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details. Use the cmake_policy command to set the policy and suppress this
warning.
Quoted variables like "H5_HAVE_FUNCTION" will no longer be dereferenced
when the policy is set to NEW. Since the policy is not set the OLD
behavior will be used.
Call Stack (most recent call first):
Modules/ThirdParty/HDF5/src/itkhdf5/config/cmake/ConfigureChecks.cmake:580 (HDF5_FUNCTION_TEST)
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ld: warning: object file (CMakeFiles/itksys.dir/ProcessUNIX.c.o) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (CMakeFiles/itksys.dir/Base64.c.o) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (CMakeFiles/itksys.dir/EncodingC.c.o) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (CMakeFiles/itksys.dir/MD5.c.o) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (CMakeFiles/itksys.dir/System.c.o) was built for newer OSX version (10.11) than being linked (10.6)
[ 1%] Built target itksys
Scanning dependencies of target ITKKWSys-all
[ 1%] Built target ITKKWSys-all
Scanning dependencies of target itkvcl
[ 1%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/vcl_deprecated.cxx.o
[ 1%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/vcl_cmath.cxx.o
[ 1%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/vcl_cassert.cxx.o
[ 1%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/vcl_cstdlib.cxx.o
[ 1%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/emulation/vcl_limits.cxx.o
[ 1%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/emulation/vcl_string_instances.cxx.o
[ 44%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaEllipse.cxx.o
[ 44%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaGroup.cxx.o
[ 44%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaGaussian.cxx.o
[ 44%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaImage.cxx.o
[ 44%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaImageUtils.cxx.o
[ 44%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaLandmark.cxx.o
[ 44%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaLine.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaMesh.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaObject.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaOutput.cxx.o
/.../CIP-master-build/ITKv4/Modules/ThirdParty/MetaIO/src/MetaIO/metaOutput.cxx:579:17: warning: expression with side effects will be evaluated despite being used as an operand to 'typeid' [-Wpotentially-evaluated-expression]
if(typeid(*(*itStream)) == typeid(MetaFileOutputStream))
^
1 warning generated.
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaScene.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaSurface.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaTube.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaVesselTube.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaTransform.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaTubeGraph.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaForm.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaArray.cxx.o
[ 45%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/CMakeFiles/ITKMetaIO.dir/metaFEMObject.cxx.o
[ 45%] Linking CXX shared library ../../../../../lib/libITKMetaIO-4.6.dylib
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(crc32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(deflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(trees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(adler32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(compress.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inffast.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inftrees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(zutil.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
[ 45%] Built target ITKMetaIO
Scanning dependencies of target ITKMetaIO-all
[ 45%] Built target ITKMetaIO-all
Scanning dependencies of target ITKSpatialObjects
[ 45%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkCylinderSpatialObject.cxx.o
[ 45%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkSpatialObjectFactoryBase.cxx.o
[ 45%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkArrowSpatialObject.cxx.o
[ 45%] Linking CXX shared library ../../../../lib/libITKSpatialObjects-4.6.dylib
[ 45%] Built target ITKSpatialObjects
Scanning dependencies of target ITKSpatialObjects-all
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadGrav.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadLandmark.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNoisyLandmark.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNode.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadPoint.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialBase.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialLinearElasticity.cxx.o
[ 50%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMUtility.cxx.o
[ 50%] Building C object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/dsrc2c.c.o
[ 51%] Linking CXX shared library ../../../../lib/libITKFEM-4.6.dylib
ld: warning: object file (CMakeFiles/ITKFEM.dir/dsrc2c.c.o) was built for newer OSX version (10.11) than being linked (10.6)
[ 51%] Built target ITKFEM
Scanning dependencies of target ITKFEM-all
[ 51%] Built target ITKFEM-all
Scanning dependencies of target ITKPDEDeformableRegistration-all
[ 51%] Built target ITKPDEDeformableRegistration-all
Scanning dependencies of target ITKFEMRegistration-all
[ 51%] Built target ITKFEMRegistration-all
Scanning dependencies of target itkopenjpeg
[ 51%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/tcd.c.o
[ 51%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/bio.c.o
[ 55%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmVR.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmFile.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmPreamble.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmParseException.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmDataElement.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmUNExplicitDataElement.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmCP246ExplicitDataElement.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmExplicitImplicitDataElement.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition/CMakeFiles/gdcmDSED.dir/gdcmVR16ExplicitDataElement.cxx.o
[ 56%] Linking CXX shared library ../../../../../../../lib/libitkgdcmDSED-4.6.dylib
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(crc32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(deflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(trees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(adler32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(compress.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inffast.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inftrees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(zutil.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
[ 56%] Built target gdcmDSED
Scanning dependencies of target gdcmIOD
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition/CMakeFiles/gdcmIOD.dir/gdcmModule.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition/CMakeFiles/gdcmIOD.dir/gdcmMacro.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition/CMakeFiles/gdcmIOD.dir/gdcmModules.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition/CMakeFiles/gdcmIOD.dir/gdcmMacros.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition/CMakeFiles/gdcmIOD.dir/gdcmNestedModuleEntries.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition/CMakeFiles/gdcmIOD.dir/gdcmIODEntry.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition/CMakeFiles/gdcmIOD.dir/gdcmTableReader.cxx.o
[ 56%] Building CXX object Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition/CMakeFiles/gdcmIOD.dir/gdcmTable.cxx.o
[ 85%] Building CXX object Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/itkGE5ImageIO.cxx.o
[ 86%] Building CXX object Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/itkGE4ImageIOFactory.cxx.o
[ 86%] Linking CXX shared library ../../../../lib/libITKIOGE-4.6.dylib
[ 86%] Built target ITKIOGE
Scanning dependencies of target ITKIOGE-all
[ 86%] Built target ITKIOGE-all
Scanning dependencies of target ITKIOGIPL
[ 86%] Building CXX object Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/itkGiplImageIOFactory.cxx.o
[ 86%] Building CXX object Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/itkGiplImageIO.cxx.o
[ 86%] Linking CXX shared library ../../../../lib/libITKIOGIPL-4.6.dylib
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(gzio.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(crc32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(deflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inflate.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(zutil.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(trees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(adler32.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(compress.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inffast.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
ld: warning: object file (/.../CIP-master-build/zlib-install/lib/libzlib.a(inftrees.c.o)) was built for newer OSX version (10.11) than being linked (10.6)
[ 86%] Built target ITKIOGIPL
Scanning dependencies of target ITKIOGIPL-all
[ 86%] Built target ITKIOGIPL-all
Scanning dependencies of target ITKIOHDF5
[ 86%] Building CXX object Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/itkHDF5ImageIOFactory.cxx.o
[ 86%] Building CXX object Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/itkHDF5ImageIO.cxx.o
[ 86%] Linking CXX shared library ../../../../lib/libITKIOHDF5-4.6.dylib
[ 86%] Built target ITKIOHDF5
Scanning dependencies of target ITKIOHDF5-all
[ 86%] Built target ITKIOHDF5-all
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Setting build type to 'Debug' as none was specified.
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Configuring done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake
--help-policy CMP0042" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
MACOSX_RPATH is not specified for the following targets:
ModuleDescriptionParser
This warning is for project developers. Use -Wno-dev to suppress it.
-- Generating done
[ 1%] Building CXX object Utilities/CMakeFiles/CIPUtilities.dir/VTK/vtkNRRDWriterCIP.cxx.o
[ 1%] Building CXX object Utilities/CMakeFiles/CIPUtilities.dir/ITK/itkFactoryRegistration.cxx.o
[ 1%] Linking CXX static library /.../CIP-master-build/lib/libCIPUtilities.a
[ 1%] Built target CIPUtilities
Scanning dependencies of target CIPCommon
[ 1%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipThinPlateSplineSurface.cxx.o
[ 1%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipLobeSurfaceModel.cxx.o
[ 1%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipChestRegionChestTypeLocations.cxx.o
[ 1%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipSphereStencil.cxx.o
[ 1%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipCylinderStencil.cxx.o
/.../CIP-master/Common/cipCylinderStencil.cxx:306:8: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
/.../CIP-master/Common/itkCIPMergeChestLabelMapsImageFilter.cxx:1:9: warning: '_itCIPkMergeChestLabelMapsImageFilter_txx' is used as a header guard here, followed by #define of a different macro [-Wheader-guard]
/.../CIP-master/Common/itkCIPMergeChestLabelMapsImageFilter.cxx:2:9: note: '_itkCIPMergeChestLabelMapsImageFilter_txx' is defined here; did you mean '_itCIPkMergeChestLabelMapsImageFilter_txx'?
#define _itkCIPMergeChestLabelMapsImageFilter_txx
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_itCIPkMergeChestLabelMapsImageFilter_txx
1 warning generated.
[ 2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipParticleConnectedComponentFilter.cxx.o
[ 2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipVesselParticleConnectedComponentFilter.cxx.o
[ 2%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipAirwayParticleConnectedComponentFilter.cxx.o
[ 3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipFissureParticleConnectedComponentFilter.cxx.o
[ 3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipLeftLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx.o
[ 3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipRightLobesThinPlateSplineSurfaceModelToParticlesMetric.cxx.o
[ 5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageReformatAlongRay2.cxx.o
[ 5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkComputeAirwayWallPolyData.cxx.o
[ 5%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageResliceWithPlane.cxx.o
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkComputeCentroid.cxx.o
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageTubularConfidence.cxx.o
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkComputeMonogenicSignal.cxx.o
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkLungIntensityCorrection.cxx.o
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkEllipseFitting.cxx.o
[ 6%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkMaskBoundingBox.cxx.o
[ 7%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkExtractAirwayTree.cxx.o
/.../CIP-master/Common/vtkExtractAirwayTree.cxx:869:3: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'? [-Wmismatched-new-delete]
[ 8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkImageKernelSource.cxx.o
[ 8%] Building CXX object Common/CMakeFiles/CIPCommon.dir/vtkTubularScaleSelection.cxx.o
/.../CIP-master/Common/vtkTubularScaleSelection.cxx:361:3: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'? [-Wmismatched-new-delete]
/.../CIP-master/Common/vtkTubularScaleSelection.cxx:459:3: warning: 'delete' applied to a pointer that was allocated with 'new[]'; did you mean 'delete[]'? [-Wmismatched-new-delete]
/.../CIP-master/cip_python/wrap_ChestConventions.cpp:4862:31: warning: function '__Pyx_PyInt_As_long' is not needed and will not be emitted [-Wunneeded-internal-declaration]
static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
^
/.../CIP-master/cip_python/wrap_ChestConventions.cpp:5047:30: warning: function '__Pyx_PyInt_As_int' is not needed and will not be emitted [-Wunneeded-internal-declaration]
static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) {
^
ld: warning: object file (/.../CIP-master-build/lib/libChestConventions.a(cipChestConventions.cxx.o)) was built for newer OSX version (10.6) than being linked (10.5)
[ 11%] Built target CIP_PYTHON
Scanning dependencies of target cipHelperTEST
[ 11%] Building CXX object Common/Testing/CMakeFiles/cipHelperTEST.dir/cipHelperTEST.cxx.o
[ 12%] Linking CXX executable cipHelperTEST
[ 12%] Built target cipHelperTEST
Scanning dependencies of target cipLobeSurfaceModelTEST
[ 12%] Building CXX object Common/Testing/CMakeFiles/cipLobeSurfaceModelTEST.dir/cipLobeSurfaceModelTEST.cxx.o
[ 12%] Linking CXX executable cipLobeSurfaceModelTEST
[ 12%] Built target cipLobeSurfaceModelTEST
Scanning dependencies of target cipNelderMeadSimplexOptimizerTEST
Scanning dependencies of target SegmentLungLobesTest
[ 30%] Building CXX object CommandLineTools/SegmentLungLobes/CMakeFiles/SegmentLungLobesTest.dir/Testing/SegmentLungLobesTest.cxx.o
[ 30%] Linking CXX executable ../Testing/bin/SegmentLungLobesTest
[ 30%] Built target SegmentLungLobesTest
[ 31%] Generating ReadDicomWriteTagsCLP.h
GenerateCLP --InputXML /.../CIP-master/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.xml --OutputCxx /.../CIP-master-build/CIP-build/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTagsCLP.h
GenerateCLP: Found 1 parameters groups
GenerateCLP: Group "IO" has 4 parameters
Scanning dependencies of target ReadDicomWriteTagsLib
[ 31%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTagsLib.dir/ReadDicomWriteTags.cxx.o
/.../CIP-master/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:298:28: warning: comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]
if ( commaLocation != std::string::npos )
~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~
/.../CIP-master/CommandLineTools/ReadDicomWriteTags/ReadDicomWriteTags.cxx:304:30: warning: comparison of constant 18446744073709551615 with expression of type 'unsigned int' is always true [-Wtautological-constant-out-of-range-compare]
if ( newlineLocation != std::string::npos )
~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~
2 warnings generated.
[ 31%] Linking CXX static library ../../bin/libReadDicomWriteTagsLib.a
[ 31%] Built target ReadDicomWriteTagsLib
Scanning dependencies of target ReadDicomWriteTags
[ 31%] Building CXX object CommandLineTools/ReadDicomWriteTags/CMakeFiles/ReadDicomWriteTags.dir/.../CIP-master-build/SlicerExecutionModel/CMake/SEMCommandLineLibraryWrapper.cxx.o
[ 31%] Linking CXX executable ../../bin/ReadDicomWriteTags
[ 31%] Built target ReadDicomWriteTags
Scanning dependencies of target ReadDicomWriteTagsTest