Wednesday, August 12 2026 04:39:53
CIP
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Show Build Graphs----------- ENTRY ------------ ----------- PHASE 2 ------------ Configuring CIP... ----------- DONE ------------ -- Configuring SEM CLI module: ConvertDicom -- Configuring SEM CLI module: MergeParticleDataSets -- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet -- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType -- Configuring SEM CLI module: GenerateOtsuLungCast -- Configuring SEM CLI module: GenerateAtlasConvexHull -- Configuring SEM CLI module: RegisterLungAtlas -- Configuring SEM CLI module: ResampleLabelMap -- Configuring SEM CLI module: RescaleLabelMap -- Configuring CIP -- Configuring SEM CLI module: ResampleCT -- Configuring SEM CLI module: QualityControl -- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles -- Configuring SEM CLI module: SegmentLungLobes -- Configuring SEM CLI module: ReadDicomWriteTags -- Configuring SEM CLI module: SplitLeftLungRightLung -- Configuring SEM CLI module: ExtractChestLabelMap -- Configuring SEM CLI module: LabelParticlesByChestRegionChestType -- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles -- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap -- Configuring SEM CLI module: FilterVesselParticleData -- Configuring SEM CLI module: FilterAirwayParticleData -- Configuring SEM CLI module: ReadNRRDsWriteVTK -- Configuring SEM CLI module: ReadVTKWriteNRRDs -- Configuring SEM CLI module: ComputeCrossSectionalArea -- Configuring SEM CLI module: ComputeIntensityStatistics -- Configuring SEM CLI module: FilterFissureParticleData -- Configuring SEM CLI module: GenerateLobeSurfaceModels -- Configuring SEM CLI module: ClassifyFissureParticles -- Configuring SEM CLI module: CropLung -- Configuring SEM CLI module: GenerateModel -- Configuring SEM CLI module: GenerateImageSubVolumes -- Configuring SEM CLI module: GenerateMedianFilteredImage -- Configuring SEM CLI module: FindPatchMatch -- Configuring SEM CLI module: TransferRegionAndTypeIndicesToFromPoints -- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults -- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType -- Configuring SEM CLI module: GenerateRegionHistogramsAndParenchymaPhenotypes -- Configuring SEM CLI module: ComputeDistanceMap -- Configuring SEM CLI module: PerturbParticles -- Configuring SEM CLI module: ReadWriteRegionAndTypePoints -- Configuring SEM CLI module: PerformMorphological -- Configuring SEM CLI module: GenerateOverlayImages -- Configuring SEM CLI module: GetTransformationSimilarityMetric -- Configuring SEM CLI module: GetTransformationKappa2D -- Configuring SEM CLI module: GetTransformationKappa -- Configuring SEM CLI module: ReadWriteImageData -- Configuring SEM CLI module: GetStructuresInLabelMap -- Configuring SEM CLI module: GeneratePartialLungLabelMap -- Configuring SEM CLI module: ReadVidaWriteCIP -- Configuring SEM CLI module: RegisterLabelMaps -- Configuring SEM CLI module: RegisterCT -- Configuring SEM CLI module: MergeChestLabelMaps -- Configuring SEM CLI module: MaskOutLabelMapStructures -- Configuring SEM CLI module: ComputeFeatureStrength -- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints -- Configuring SEM CLI module: GenerateSimpleLungMask -- Configuring SEM CLI module: GenerateBinaryThinning3D -- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue -- Configuring SEM CLI module: FilterConnectedComponents -- Configuring SEM CLI module: EnhanceFissuresInImage -- Configuring SEM CLI module: ComputeFissureFeatureVectors -- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData -- Configuring SEM CLI module: GenerateLesionSegmentation -- Configuring SEM CLI module: RemapLabelMap -- Configuring SEM CLI module: GenerateNLMFilteredImage -- Configuring SEM CLI module: ComputeAirwayWallFromParticles -- Configuring SEM CLI module: RegionTypeLocationsToROIVolume -- Configuring SEM CLI module: ExtractFissureBoundaryFromLobeMap -- Configuring SEM CLI module: ExecuteSystemCommand Wrapping ChestConventions with Python in /Users/jonieva/Projects/CIP-build/CIPPython-install/bin/python and flags -fPIC -- Configuring done -- Generating done -- Build files have been written to: /Users/jonieva/Projects/CIP-build/CIP-build
# packages in environment at /.../CIP-build/CIPPython-install: # nose 1.3.7 py27_0 [ 53%] Performing installpynrrd step for 'CIPPython' [ 54%] Performing installpydicom step for 'CIPPython' [ 56%] Completed 'CIPPython' [ 59%] Built target CIPPython [ 60%] Performing update step for 'teem' [ 62%] Performing configure step for 'teem' loading initial cache file /.../CIP-build/teem-prefix/tmp/teem-cache-Release.cmake
CMake Warning (dev) at CMakeLists.txt:555 (install):
Policy CMP0062 is not set: Disallow install() of export() result. Run
"cmake --help-policy CMP0062" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The file
/.../CIP-build/teem-build/TeemLibraryDepends.cmake
was generated by the export() command. It should not be installed with the
install() command. Use the install(EXPORT) mechanism instead. See thecmake-packages(7) manual for more. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake --help-policy CMP0042" for policy details. Use the cmake_policy command to set the policy and suppress this warning. MACOSX_RPATH is not specified for the following targets: teem This warning is for project developers. Use -Wno-dev to suppress it.
[100%] Built target ITKVtkGlue [100%] Built target ITKVtkGlue-all [ 74%] No install step for 'ITKv4' [ 75%] Completed 'ITKv4' [ 79%] Built target ITKv4 [ 80%] Performing update step for 'SlicerExecutionModel' [ 81%] Performing configure step for 'SlicerExecutionModel' loading initial cache file /.../CIP-build/SlicerExecutionModel-prefix/tmp/SlicerExecutionModel-cache-Release.cmake -- Configuring done -- Generating done
CMake Warning (dev):
Policy CMP0042 is not set: MACOSX_RPATH is enabled by default. Run "cmake --help-policy CMP0042" for policy details. Use the cmake_policy command to set the policy and suppress this warning. MACOSX_RPATH is not specified for the following targets: ModuleDescriptionParser This warning is for project developers. Use -Wno-dev to suppress it.
