Wednesday, August 12 2026 06:11:07
CIP
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Show Build Graphs-- The C compiler identification is GNU 4.8.2 -- The CXX compiler identification is GNU 4.8.2 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done ----------- ENTRY ------------ Configuring Superbuild... -- Found Git: /usr/bin/git (found version "2.1.0") -- SuperBuild - First pass -- SuperBuild - First pass - done -- SuperBuild - CIP => Requires CIPPython[INCLUDED], SlicerExecutionModel, VTKv6, ITKv4, Boost[INCLUDED], teem, -- SuperBuild - SlicerExecutionModel => Requires ITKv4, -- SuperBuild - ITKv4 => Requires zlib, VTKv6, -- SuperBuild - zlib[OK] -- SuperBuild - ZLIB_INCLUDE_DIR:/home/ec2-user/Projects/CIP-build/CIP-build/zlib-install/include -- SuperBuild - ZLIB_LIBRARY:/home/ec2-user/Projects/CIP-build/CIP-build/zlib-install/lib/libzlib.a -- SuperBuild - ZLIB_ROOT:/home/ec2-user/Projects/CIP-build/CIP-build/zlib-install -- SuperBuild - VTKv6 => Requires zlib[INCLUDED], -- SuperBuild - VTKv6[OK] -- SuperBuild - PNG_INCLUDE_DIR:/home/ec2-user/Projects/CIP-build/CIP-build/VTKv6/Utilities/vtkpng -- SuperBuild - PNG_LIBRARY:/home/ec2-user/Projects/CIP-build/CIP-build/VTKv6-build/bin/libvtkpng.so -- SuperBuild - LIBXML_INCLUDE_DIR:/home/ec2-user/Projects/CIP-build/CIP-build/VTKv6/ThirdParty/libxml2/vtklibxml2 -- SuperBuild - ITKv4[OK] -- SuperBuild - SlicerExecutionModel[OK] -- SuperBuild - teem => Requires zlib[INCLUDED], VTKv6[INCLUDED], -- SuperBuild - teem[OK] -- SuperBuild - CIP[OK] ----------- DONE ------------ -- Configuring done -- Generating done -- Build files have been written to: /home/ec2-user/Projects/CIP-build/CIP-build
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/pthread
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/pthread/thread.o
In file included from ./boost/bind/bind.hpp:29:0,
from ./boost/bind.hpp:22,
from ./boost/thread/detail/thread.hpp:29,
from ./boost/thread/thread_only.hpp:22,
from libs/thread/src/pthread/thread.cpp:11:
./boost/bind/arg.hpp: In constructor ‘boost::arg<I>::arg(const T&)’:
./boost/bind/arg.hpp:37:22: warning: typedef ‘T_must_be_placeholder’ locally defined but not used [-Wunused-local-typedefs]
typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
^
In file included from ./boost/tuple/tuple.hpp:33:0,
from ./boost/thread/detail/async_func.hpp:37,
from ./boost/thread/future.hpp:22,
from libs/thread/src/pthread/thread.cpp:19:
./boost/tuple/detail/tuple_basic.hpp: In function ‘typename boost::tuples::access_traits<typename boost::tuples::element<N, boost::tuples::cons<HT, TT> >::type>::const_type boost::tuples::get(const boost::tuples::cons<HT, TT>&)’:
./boost/tuple/detail/tuple_basic.hpp:228:45: warning: typedef ‘cons_element’ locally defined but not used [-Wunused-local-typedefs]
typedef BOOST_DEDUCED_TYPENAME impl::type cons_element;
^
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/pthread/once.o
In file included from ./boost/bind/bind.hpp:29:0,
from ./boost/bind.hpp:22,
from ./boost/thread/pthread/once_atomic.hpp:19,
from ./boost/thread/once.hpp:20,
from libs/thread/src/pthread/./once_atomic.cpp:9,
from libs/thread/src/pthread/once.cpp:8:
./boost/bind/arg.hpp: In constructor ‘boost::arg<I>::arg(const T&)’:./boost/bind/arg.hpp:37:22: warning: typedef ‘T_must_be_placeholder’ locally defined but not used [-Wunused-local-typedefs]
typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
^
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/future.o
gcc.link.dll bin.v2/libs/thread/build/gcc-4.8.2/release/threading-multi/libboost_thread.so.1.54.0
common.copy /.../CIP-build/Boost-install/lib/libboost_thread.so.1.54.0
ln-UNIX /.../CIP-build/Boost-install/lib/libboost_thread.so
common.mkdir bin.v2/libs/context/build
common.mkdir bin.v2/libs/context/build/gcc-4.8.2
common.mkdir bin.v2/libs/context/build/gcc-4.8.2/release
common.mkdir bin.v2/libs/context/build/gcc-4.8.2/release/link-staticcommon.copy /.../CIP-build/Boost-install/lib/libboost_context.a common.mkdir bin.v2/libs/coroutine common.mkdir bin.v2/libs/coroutine/build common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2 common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2/release common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi common.mkdir bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi/detail gcc.compile.c++ bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi/detail/standard_stack_allocator_posix.o libs/coroutine/src/detail/standard_stack_allocator_posix.cpp: In function ‘rlimit boost::coroutines::detail::stacksize_limit_()’:
libs/coroutine/src/detail/standard_stack_allocator_posix.cpp:61:15: warning: unused variable ‘result’ [-Wunused-variable]
const int result = ::getrlimit( RLIMIT_STACK, & limit);
^
libs/coroutine/src/detail/standard_stack_allocator_posix.cpp: In member function ‘void boost::coroutines::detail::standard_stack_allocator::allocate(boost::coroutines::stack_context&, std::size_t)’:
libs/coroutine/src/detail/standard_stack_allocator_posix.cpp:135:15: warning: unused variable ‘result’ [-Wunused-variable]
const int result( ::mprotect( limit, detail::pagesize(), PROT_NONE) );
^
gcc.compile.c++ bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi/detail/coroutine_context.o
gcc.archive bin.v2/libs/coroutine/build/gcc-4.8.2/release/link-static/threading-multi/libboost_coroutine.a
common.copy /.../CIP-build/Boost-install/lib/libboost_coroutine.a
common.mkdir /.../CIP-build/Boost-install/include
common.mkdir /.../CIP-build/Boost-install/include/boost
common.copy /.../CIP-build/Boost-install/include/boost/operators.hpp
common.copy /.../CIP-build/Boost-install/include/boost/none.hpp
common.copy /.../CIP-build/Boost-install/include/boost/intrusive_ptr.hppcommon.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/link-static
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi
common.mkdir bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/pthread
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/pthread/thread.o
In file included from ./boost/bind/bind.hpp:29:0,
from ./boost/bind.hpp:22,
from ./boost/thread/detail/thread.hpp:29,
from ./boost/thread/thread_only.hpp:22,
from libs/thread/src/pthread/thread.cpp:11:
./boost/bind/arg.hpp: In constructor ‘boost::arg<I>::arg(const T&)’:
./boost/bind/arg.hpp:37:22: warning: typedef ‘T_must_be_placeholder’ locally defined but not used [-Wunused-local-typedefs]
typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
^
In file included from ./boost/tuple/tuple.hpp:33:0,
from ./boost/thread/detail/async_func.hpp:37,
from ./boost/thread/future.hpp:22,
from libs/thread/src/pthread/thread.cpp:19:
./boost/tuple/detail/tuple_basic.hpp: In function ‘typename boost::tuples::access_traits<typename boost::tuples::element<N, boost::tuples::cons<HT, TT> >::type>::const_type boost::tuples::get(const boost::tuples::cons<HT, TT>&)’:
./boost/tuple/detail/tuple_basic.hpp:228:45: warning: typedef ‘cons_element’ locally defined but not used [-Wunused-local-typedefs]
typedef BOOST_DEDUCED_TYPENAME impl::type cons_element;
^
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/pthread/once.o
In file included from ./boost/bind/bind.hpp:29:0,
from ./boost/bind.hpp:22,
from ./boost/thread/pthread/once_atomic.hpp:19,
from ./boost/thread/once.hpp:20,
from libs/thread/src/pthread/./once_atomic.cpp:9,
from libs/thread/src/pthread/once.cpp:8:
./boost/bind/arg.hpp: In constructor ‘boost::arg<I>::arg(const T&)’:./boost/bind/arg.hpp:37:22: warning: typedef ‘T_must_be_placeholder’ locally defined but not used [-Wunused-local-typedefs]
typedef char T_must_be_placeholder[ I == is_placeholder<T>::value? 1: -1 ];
^
gcc.compile.c++ bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/future.o
gcc.archive bin.v2/libs/thread/build/gcc-4.8.2/release/link-static/threading-multi/libboost_thread.a
common.copy /.../CIP-build/Boost-install/lib/libboost_thread.a
...updated 10644 targets...
[ 7%] Performing build step for 'Boost'
cmake version 2.8.12
Usage
[ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadElementBase.cxx.o [ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadGrav.cxx.o [ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadLandmark.cxx.o [ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNoisyLandmark.cxx.o [ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNode.cxx.o [ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadPoint.cxx.o [ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialBase.cxx.o [ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialLinearElasticity.cxx.o [ 49%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMUtility.cxx.o [ 49%] Building C object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/dsrc2c.c.o
cc1: warning: command line option ‘-fvisibility-inlines-hidden’ is valid for C++/ObjC++ but not for C [enabled by default]
Linking CXX shared library ../../../../lib/libITKFEM-4.10.so [ 49%] Built target ITKFEM Scanning dependencies of target ITKFEM-all [ 49%] Built target ITKFEM-all Scanning dependencies of target ITKPDEDeformableRegistration-all [ 49%] Built target ITKPDEDeformableRegistration-all Scanning dependencies of target ITKFEMRegistration-all [ 49%] Built target ITKFEMRegistration-all Scanning dependencies of target gdcmuuid [ 49%] Building C object Modules/ThirdParty/GDCM/src/gdcm/Utilities/gdcmuuid/CMakeFiles/gdcmuuid.dir/compare.c.o
cythoning /.../CIP/cip_python/wrap_ChestConventions.pyx to /.../CIP/cip_python/wrap_ChestConventions.cpp building 'ChestConventions' extension creating build creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/home creating build/temp.linux-x86_64-2.7/home/ec2-user creating build/temp.linux-x86_64-2.7/home/ec2-user/Projects creating build/temp.linux-x86_64-2.7/.../CIP creating build/temp.linux-x86_64-2.7/.../CIP/cip_python /usr/bin/cc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/.../CIP/Common/ -I/.../CIP-build/CIPPython-install/include/python2.7 -c /.../CIP/cip_python/wrap_ChestConventions.cpp -o build/temp.linux-x86_64-2.7/.../CIP/cip_python/wrap_ChestConventions.o
cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ [enabled by default]
/usr/bin/c++ -pthread -shared -L/.../CIP-build/CIPPython-install/lib -Wl,-rpath=/.../CIP-build/CIPPython-install/lib,--no-as-needed build/temp.linux-x86_64-2.7/.../CIP/cip_python/wrap_ChestConventions.o -L/.../CIP-build/lib -L/.../CIP-build/CIPPython-install/lib -lChestConventions -lpython2.7 -o /.../CIP-build/CIP-build/cip_python/ChestConventions.so [ 16%] Built target CIP_PYTHON Scanning dependencies of target cipHelperTEST [ 16%] Building CXX object Common/Testing/CMakeFiles/cipHelperTEST.dir/cipHelperTEST.cxx.o Linking CXX executable cipHelperTEST [ 16%] Built target cipHelperTEST Scanning dependencies of target cipLobeSurfaceModelTEST [ 17%] Building CXX object Common/Testing/CMakeFiles/cipLobeSurfaceModelTEST.dir/cipLobeSurfaceModelTEST.cxx.o Linking CXX executable cipLobeSurfaceModelTEST [ 17%] Built target cipLobeSurfaceModelTEST
