CDash : CIP

Site Name: ip-172-31-44-204.ec2.internal
Build Name: CIP-Linux-3.10.0-123.el7.x86_64-x86_64-incr-SL-ON (view notes)
Stamp: 20160221-0400-Nightly (related builds)
Time: 2016-02-21T00:03:02 EST
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.10.0-123.el7.x86_64
OS Version: #1 SMP Mon May 5 11:16:57 EDT 2014
Compiler Version: unknown
CTest version: ctest-2.8.11

Current Build
Stage	Errors	Warnings
Update	0	0
Configure	0	0
Build	50	0
Test	0	0

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Configure	0	0
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Test	0	0

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Stage: Update (0 errors, 0 warnings)

Start Time: 2016-02-21T00:02:41 EST
End Time: 2016-02-21T00:02:42 EST
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2016-02-21T00:02:43 EST
End Time: 2016-02-21T00:03:01 EST
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/home/ec2-user/Projects/CIP"
Configure Return Value: 0
Configure Output:

----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
ChestConv: ON
----------- DONE ------------
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull
-- Configuring SEM CLI module: RegisterLungAtlas
-- Configuring SEM CLI module: ResampleLabelMap
-- Configuring SEM CLI module: RescaleLabelMap
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ReadVTKWriteNRRDs
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: FindPatchMatch
-- Configuring SEM CLI module: TransferRegionAndTypeIndicesToFromPoints
-- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateRegionHistogramsAndParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric
-- Configuring SEM CLI module: GetTransformationKappa2D
-- Configuring SEM CLI module: GetTransformationKappa
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: ReadVidaWriteCIP
-- Configuring SEM CLI module: RegisterLabelMaps
-- Configuring SEM CLI module: RegisterCT
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue
-- Configuring SEM CLI module: FilterConnectedComponents
-- Configuring SEM CLI module: EnhanceFissuresInImage
-- Configuring SEM CLI module: ComputeFissureFeatureVectors
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring SEM CLI module: GenerateLesionSegmentation
-- Configuring SEM CLI module: RemapLabelMap
-- Configuring SEM CLI module: GenerateNLMFilteredImage
-- Configuring SEM CLI module: ComputeAirwayWallFromParticles
-- Configuring SEM CLI module: RegionTypeLocationsToROIVolume
-- Configuring SEM CLI module: ExtractFissureBoundaryFromLobeMap
-- Configuring SEM CLI module: ExecuteSystemCommand
Wrapping ChestConventions with Python in /home/ec2-user/Projects/CIP-build/CIPPython-install/bin/python
Installing cip_python tools in /home/ec2-user/Projects/CIP-build/CIP-build
-- Configuring done
-- Generating done
-- Build files have been written to: /home/ec2-user/Projects/CIP-build/CIP-build

View Configure Summary

Build (50 errors, 0 warnings)

Build command: /usr/bin/gmake -i
Start Time: 2016-02-21T00:03:02 EST
End Time: 2016-02-21T00:15:32 EST

[ 97%] Built target ITKIOPNG
[ 97%] Built target ITKIOPNG-all
[ 97%] Built target ITKIORAW-all
[ 97%] Built target ITKIOSiemens
[ 97%] Built target ITKIOSiemens-all
[ 97%] Built target ITKIOStimulate
[ 97%] Built target ITKIOStimulate-all
[ 97%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformFactoryBase.cxx.o
virtual memory exhausted: Cannot allocate memory
Linking CXX shared library ../../../../lib/libITKIOTransformBase-4.9.so

c++: error: CMakeFiles/ITKIOTransformBase.dir/itkTransformFactoryBase.cxx.o: No such file or directory

[ 97%] Built target ITKIOTransformBase
[ 97%] Built target ITKIOTransformBase-all

gmake[5]: *** No rule to make target `lib/libITKIOTransformBase-4.9.so.1', needed by `lib/libITKIOTransformHDF5-4.9.so.1'.  Stop.

[ 97%] Built target ITKIOTransformHDF5
[ 97%] Built target ITKIOTransformHDF5-all

gmake[5]: *** No rule to make target `lib/libITKIOTransformBase-4.9.so.1', needed by `lib/libITKIOTransformInsightLegacy-4.9.so.1'.  Stop.

[ 97%] Built target ITKIOTransformInsightLegacy
[ 97%] Built target ITKIOTransformInsightLegacy-all

gmake[5]: *** No rule to make target `lib/libITKIOTransformBase-4.9.so.1', needed by `lib/libITKIOTransformMatlab-4.9.so.1'.  Stop.

[ 98%] Built target ITKIOTransformMatlab
[ 98%] Built target ITKIOTransformMatlab-all
[ 98%] Built target ITKIOVTK
[ 98%] Built target ITKIOVTK-all
[ 98%] Built target ITKImageFusion-all
[ 98%] Built target ITKImageNoise-all
[ 98%] Built target ITKIntegratedTest-all
[ 98%] Built target ITKKLMRegionGrowing
[ 98%] Built target ITKKLMRegionGrowing-all
[ 98%] Built target ITKLabelVoting-all

[ 99%] Built target ITKOpenJPEG-all
[ 99%] Built target ITKQuadEdgeMeshFiltering-all
[ 99%] Built target ITKRegionGrowing-all
[ 99%] Built target ITKRegistrationMethodsv4-all
[ 99%] Built target ITKSpatialFunction-all
[ 99%] Built target ITKVTK
[ 99%] Built target ITKVTK-all
[ 99%] Built target ITKVoronoi-all
[100%] Built target ITKWatersheds
[100%] Built target ITKWatersheds-all

gmake[5]: *** No rule to make target `lib/libITKIOTransformHDF5-4.9.so.1', needed by `lib/libITKReview-4.9.so.1'.  Stop.

[100%] Built target ITKReview
[100%] Built target ITKReview-all
[100%] Built target itkTestDriver
[100%] Built target ITKTestKernel-all
[100%] Built target ITKVideoCore
[100%] Built target ITKVideoCore-all
[100%] Built target ITKVideoFiltering-all
[100%] Built target ITKVideoIO
[100%] Built target ITKVideoIO-all
[100%] Built target ITKVtkGlue

[  3%] Built target CIPUtilities
[  3%] Building CXX object Common/CMakeFiles/CIPCommon.dir/cipHelper.cxx.o
Linking CXX static library /.../CIP-build/lib/libCIPCommon.a
/usr/bin/ranlib: /.../CIP-build/lib/libCIPCommon.a: No space left on device
[ 15%] Built target CIPCommon
[ 15%] Built target ChestConventions
[ 16%] Built target CIPIO
running build_ext
skipping '/.../CIP/cip_python/wrap_ChestConventions.cpp' Cython extension (up-to-date)
[ 16%] Built target CIP_PYTHON

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `Common/Testing/cipHelperTEST'.  Stop.

[ 16%] Built target cipHelperTEST

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `Common/Testing/cipLobeSurfaceModelTEST'.  Stop.

[ 17%] Built target cipLobeSurfaceModelTEST

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `Common/Testing/cipNelderMeadSimplexOptimizerTEST'.  Stop.

[ 17%] Built target cipNelderMeadSimplexOptimizerTEST

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `Common/Testing/itkCIPExtractChestLabelMapImageFilterTEST'.  Stop.

[ 17%] Built target itkCIPExtractChestLabelMapImageFilterTEST

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `Common/Testing/itkCIPMergeChestLabelMapsImageFilterTEST'.  Stop.

[ 18%] Built target itkCIPMergeChestLabelMapsImageFilterTEST

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `IO/Testing/cipChestRegionChestTypeLocationsIOTEST'.  Stop.

[ 19%] Built target cipChestRegionChestTypeLocationsIOTEST

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `IO/Testing/cipLobeSurfaceModelIOTEST'.  Stop.

[ 19%] Built target cipLobeSurfaceModelIOTEST
[ 19%] Built target ConvertDicomLib

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ConvertDicom'.  Stop.

[ 20%] Built target ConvertDicom
[ 20%] Building CXX object CommandLineTools/ConvertDicom/CMakeFiles/ConvertDicomTest.dir/Testing/ConvertDicomTest.cxx.o

Build Log line 1253

File: CommandLineTools/ConvertDicom/Testing/ConvertDicomTest.cxx Line: 16

/.../CIP/CommandLineTools/ConvertDicom/Testing/ConvertDicomTest.cxx:16:1: fatal error: error writing to /tmp/cc18moxM.s: No space left on device

 }
 ^
compilation terminated.
Cannot create temporary file in /tmp/: No space left on device
/bin/sh: line 1:  4688 Aborted                 /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -fPIC -Wno-array-bounds -msse2 -O3 -DNDEBUG -I/.../CIP/CommandLineTools/Testing -I/.../CIP-build/CIP-build/IO -I/.../CIP-build/CIP-build/Utilities/LesionSizingToolkit -I/.../CIP-build/CIP-build/Utilities/ITK -I/.../CIP-build/CIP-build/Utilities/VTK -I/.../CIP-build/CIP-build/Common -I/.../CIP/IO -I/.../CIP/Utilities/LesionSizingToolkit -I/.../CIP/Utilities/VTK -I/.../CIP/Utilities/ITK -I/.../CIP/Common -I/.../CIP-build/CIP-build/CommandLineTools/ConvertDicom -I/.../CIP-build/SlicerExecutionModel-build/ModuleDescriptionParser -I/.../CIP-build/SlicerExecutionModel/ModuleDescriptionParser -I/.../CIP-build/SlicerExecutionModel/tclap/include -I/.../CIP-build/SlicerExecutionModel-build/GenerateCLP -I/.../CIP-build/SlicerExecutionModel/GenerateCLP -I/.../CIP-build/teem-build/include -I/.../CIP-build/VTKv6/Rendering/VolumeOpenGL -I/.../CIP-build/VTKv6-build/Rendering/VolumeOpenGL -I/.../CIP-build/VTKv6/IO/LSDyna -I/.../CIP-build/VTKv6-build/IO/LSDyna -I/.../CIP-build/VTKv6/IO/Infovis -I/.../CIP-build/VTKv6-build/IO/Infovis -I/.../CIP-build/VTKv6/Views/Infovis -I/.../CIP-build/VTKv6-build/Views/Infovis -I/.../CIP-build/VTKv6/ThirdParty/libxml2 -I/.../CIP-build/VTKv6-build/ThirdParty/libxml2 -I/.../CIP-build/VTKv6-build/ThirdParty/libxml2/vtklibxml2 -I/.../CIP-build/VTKv6/Views/Context2D -I/.../CIP-build/VTKv6-build/Views/Context2D -I/.../CIP-build/VTKv6/IO/Import -I/.../CIP-build/VTKv6-build/IO/Import -I/.../CIP-build/VTKv6/Testing/Rendering -I/.../CIP-build/VTKv6-build/Testing/Rendering -I/.../CIP-build/VTKv6/IO/Export -I/.../CIP-build/VTKv6-build/IO/Export -I/.../CIP-build/VTKv6/IO/Video -I/.../CIP-build/VTKv6-build/IO/Video -I/.../CIP-build/VTKv6/Rendering/Label -I/.../CIP-build/VTKv6-build/Rendering/Label -I/.../CIP-build/VTKv6/Testing/Core -I/.../CIP-build/VTKv6-build/Testing/Core -I/.../CIP-build/VTKv6/Rendering/GL2PS -I/.../CIP-build/VTKv6-build/Rendering/GL2PS -I/.../CIP-build/VTKv6/ThirdParty/gl2ps -I/.../CIP-build/VTKv6-build/ThirdParty/gl2ps -I/.../CIP-build/VTKv6/Rendering/ContextOpenGL -I/.../CIP-build/VTKv6-build/Rendering/ContextOpenGL -I/.../CIP-build/VTKv6/IO/SQL -I/.../CIP-build/VTKv6-build/IO/SQL -I/.../CIP-build/VTKv6/ThirdParty/sqlite -I/.../CIP-build/VTKv6-build/ThirdParty/sqlite -I/.../CIP-build/VTKv6/Rendering/LOD -I/.../CIP-build/VTKv6-build/Rendering/LOD -I/.../CIP-build/VTKv6/Utilities/EncodeString -I/.../CIP-build/VTKv6-build/Utilities/EncodeString -I/.../CIP-build/VTKv6/Utilities/ParseOGLExt -I/.../CIP-build/VTKv6-build/Utilities/ParseOGLExt -I/.../CIP-build/VTKv6/Rendering/OpenGL -I/.../CIP-build/VTKv6-build/Rendering/OpenGL -I/.../CIP-build/VTKv6/Rendering/LIC -I/.../CIP-build/VTKv6-build/Rendering/LIC -I/.../CIP-build/VTKv6/IO/Exodus -I/.../CIP-build/VTKv6-build/IO/Exodus -I/.../CIP-build/VTKv6/IO/ParallelXML -I/.../CIP-build/VTKv6-build/IO/ParallelXML -I/.../CIP-build/VTKv6/IO/EnSight -I/.../CIP-build/VTKv6-build/IO/EnSight -I/.../CIP-build/VTKv6/Rendering/Image -I/.../CIP-build/VTKv6-build/Rendering/Image -I/.../CIP-build/VTKv6/Interaction/Image -I/.../CIP-build/VTKv6-build/Interaction/Image -I/.../CIP-build/VTKv6/IO/AMR -I/.../CIP-build/VTKv6-build/IO/AMR -I/.../CIP-build/VTKv6/ThirdParty/exodusII -I/.../CIP-build/VTKv6-build/ThirdParty/exodusII -I/.../CIP-build/VTKv6/IO/Parallel -I/.../CIP-build/VTKv6-build/IO/Parallel -I/.../CIP-build/VTKv6/IO/MINC -I/.../CIP-build/VTKv6-build/IO/MINC -I/.../CIP-build/VTKv6/ThirdParty/jsoncpp -I/.../CIP-build/VTKv6-build/ThirdParty/jsoncpp -I/.../CIP-build/VTKv6/Imaging/Stencil -I/.../CIP-build/VTKv6-build/Imaging/Stencil -I/.../CIP-build/VTKv6/IO/PLY -I/.../CIP-build/VTKv6-build/IO/PLY -I/.../CIP-build/VTKv6/ThirdParty/netcdf -I/.../CIP-build/VTKv6-build/ThirdParty/netcdf -I/.../CIP-build/VTKv6-build/ThirdParty/netcdf/vtknetcdf -I/.../CIP-build/VTKv6/ThirdParty/netcdf/vtknetcdf/include -I/.../CIP-build/VTKv6/IO/NetCDF -I/.../CIP-build/VTKv6-build/IO/NetCDF -I/.../CIP-build/VTKv6/Imaging/Statistics -I/.../CIP-build/VTKv6-build/Imaging/Statistics -I/.../CIP-build/VTKv6/Imaging/Morphological -I/.../CIP-build/VTKv6-build/Imaging/Morphological -I/.../CIP-build/VTKv6/ThirdParty/oggtheora -I/.../CIP-build/VTKv6-build/ThirdParty/oggtheora -I/.../CIP-build/VTKv6/IO/Movie -I/.../CIP-build/VTKv6-build/IO/Movie -I/.../CIP-build/VTKv6/Imaging/Math -I/.../CIP-build/VTKv6-build/Imaging/Math -I/.../CIP-build/VTKv6/Filters/ParallelImaging -I/.../CIP-build/VTKv6-build/Filters/ParallelImaging -I/.../CIP-build/VTKv6/Charts/Core -I/.../CIP-build/VTKv6-build/Charts/Core -I/.../CIP-build/VTKv6/ThirdParty/libproj4 -I/.../CIP-build/VTKv6-build/ThirdParty/libproj4 -I/.../CIP-build/VTKv6-build/ThirdParty/libproj4/vtklibproj4 -I/.../CIP-build/VTKv6/ThirdParty/libproj4/vtklibproj4 -I/.../CIP-build/VTKv6/Infovis/Layout -I/.../CIP-build/VTKv6-build/Infovis/Layout -I/.../CIP-build/VTKv6/Geovis/Core -I/.../CIP-build/VTKv6-build/Geovis/Core -I/.../CIP-build/VTKv6/Rendering/Volume -I/.../CIP-build/VTKv6-build/Rendering/Volume -I/.../CIP-build/VTKv6/Imaging/Color -I/.../CIP-build/VTKv6-build/Imaging/Color -I/.../CIP-build/VTKv6/Rendering/Annotation -I/.../CIP-build/VTKv6-build/Rendering/Annotation -I/.../CIP-build/VTKv6/Interaction/Style -I/.../CIP-build/VTKv6-build/Interaction/Style -I/.../CIP-build/VTKv6/Imaging/Hybrid -I/.../CIP-build/VTKv6-build/Imaging/Hybrid -I/.../CIP-build/VTKv6/Interaction/Widgets -I/.../CIP-build/VTKv6-build/Interaction/Widgets -I/.../CIP-build/VTKv6/Views/Core -I/.../CIP-build/VTKv6-build/Views/Core -I/.../CIP-build/VTKv6/Filters/Imaging -I/.../CIP-build/VTKv6-build/Filters/Imaging -I/.../CIP-build/VTKv6/IO/XML -I/.../CIP-build/VTKv6-build/IO/XML -I/.../CIP-build/VTKv6/Imaging/General -I/.../CIP-build/VTKv6-build/Imaging/General -I/.../CIP-build/VTKv6/IO/XMLParser -I/.../CIP-build/VTKv6-build/IO/XMLParser -I/.../CIP-build/VTKv6/Infovis/Core -I/.../CIP-build/VTKv6-build/Infovis/Core -I/.../CIP-build/VTKv6/ThirdParty/expat -I/.../CIP-build/VTKv6-build/ThirdParty/expat -I/.../CIP-build/VTKv6/ThirdParty/hdf5 -I/.../CIP-build/VTKv6-build/ThirdParty/hdf5 -I/.../CIP-build/VTKv6/ThirdParty/hdf5/vtkhdf5/src -I/.../CIP-build/VTKv6/ThirdParty/hdf5/vtkhdf5/hl/src -I/.../CIP-build/VTKv6-build/ThirdParty/hdf5/vtkhdf5 -I/.../CIP-build/VTKv6/Filters/HyperTree -I/.../CIP-build/VTKv6-build/Filters/HyperTree -I/.../CIP-build/VTKv6/Utilities/MetaIO -I/.../CIP-build/VTKv6-build/Utilities/MetaIO -I/.../CIP-build/VTKv6-build/Utilities/MetaIO/vtkmetaio -I/.../CIP-build/VTKv6/Utilities/DICOMParser -I/.../CIP-build/VTKv6-build/Utilities/DICOMParser -I/.../CIP-build/VTKv6/IO/Image -I/.../CIP-build/VTKv6-build/IO/Image 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-I/.../CIP-build/ITKv4-build/Modules/ThirdParty/VNL/src/vxl/core -I/.../CIP-build/ITKv4-build/Modules/ThirdParty/VNL/src/vxl/vcl -I/.../CIP-build/ITKv4-build/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/.../CIP-build/ITKv4/Modules/ThirdParty/VNL/src/vxl/core -I/.../CIP-build/ITKv4/Modules/ThirdParty/VNL/src/vxl/vcl -I/.../CIP-build/ITKv4/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/.../CIP-build/ITKv4-build/Modules/ThirdParty/KWSys/src -I/.../CIP-build/ITKv4/Modules/ThirdParty/KWIML/src -I/.../CIP-build/ITKv4-build/Modules/ThirdParty/KWIML/src -I/.../CIP-build/ITKv4-build/Modules/ThirdParty/DoubleConversion/src/double-conversion -I/.../CIP-build/ITKv4/Modules/ThirdParty/DoubleConversion/src/double-conversion -I/.../CIP-build/VTKv6-build/ThirdParty/hdf5/vtkhdf5/hl/src -I/.../CIP-build/VTKv6-build/ThirdParty/hdf5/vtkhdf5/src -o CMakeFiles/ConvertDicomTest.dir/Testing/ConvertDicomTest.cxx.o -c /.../CIP/CommandLineTools/ConvertDicom/Testing/ConvertDicomTest.cxx

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/ConvertDicomTest'.  Stop.

[ 20%] Built target ConvertDicomTest
[ 20%] Built target MergeParticleDataSetsLib
[ 20%] Built target MergeParticleDataSets
[ 20%] Built target MergeParticleDataSetsTest
[ 20%] Built target RemoveParticlesFromParticlesDataSetLib
[ 20%] Built target RemoveParticlesFromParticlesDataSet
[ 20%] Built target RemoveParticlesFromParticlesDataSetTest
[ 20%] Built target ExtractParticlesFromChestRegionChestTypeLib
[ 20%] Built target ExtractParticlesFromChestRegionChestType
[ 20%] Built target ExtractParticlesFromChestRegionChestTypeTest

[ 20%] Built target GenerateOtsuLungCast
[ 20%] Built target GenerateOtsuLungCastTest
[ 20%] Built target GenerateAtlasConvexHullLib
[ 20%] Built target GenerateAtlasConvexHull
[ 20%] Built target GenerateAtlasConvexHullTest
[ 20%] Built target RegisterLungAtlasLib
[ 20%] Built target RegisterLungAtlas
[ 20%] Built target RegisterLungAtlasTest
[ 20%] Built target ResampleLabelMapLib
[ 20%] Built target ResampleLabelMap

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/MergeParticleDataSets'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/MergeParticleDataSetsTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/RemoveParticlesFromParticlesDataSet'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/RemoveParticlesFromParticlesDataSetTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ExtractParticlesFromChestRegionChestType'.  Stop.

[ 20%] Built target ResampleLabelMapTest
[ 20%] Built target RescaleLabelMapLib
[ 20%] Built target RescaleLabelMap
[ 20%] Built target RescaleLabelMapTest
[ 20%] Built target ResampleCTLib
[ 20%] Built target ResampleCT
[ 20%] Built target ResampleCTTest
[ 20%] Built target QualityControlLib
[ 20%] Built target QualityControl
[ 20%] Built target QualityControlTest

[ 20%] Built target SegmentLungLobes
[ 20%] Built target SegmentLungLobesTest
[ 20%] Built target ReadDicomWriteTagsLib
[ 20%] Built target ReadDicomWriteTags
[ 20%] Built target ReadDicomWriteTagsTest
[ 20%] Built target SplitLeftLungRightLungLib
[ 20%] Built target SplitLeftLungRightLung
[ 20%] Built target SplitLeftLungRightLungTest
[ 20%] Built target ExtractChestLabelMapLib
[ 20%] Built target ExtractChestLabelMap

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/ExtractParticlesFromChestRegionChestTypeTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/GenerateOtsuLungCast'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/GenerateOtsuLungCastTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/GenerateAtlasConvexHull'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/GenerateAtlasConvexHullTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/RegisterLungAtlas'.  Stop.

[ 20%] Built target ExtractChestLabelMapTest
[ 20%] Built target LabelParticlesByChestRegionChestTypeLib
[ 20%] Built target LabelParticlesByChestRegionChestType
[ 20%] Built target LabelParticlesByChestRegionChestTypeTest
[ 20%] Built target GenerateStenciledLabelMapFromParticlesLib
[ 20%] Built target GenerateStenciledLabelMapFromParticles
[ 20%] Built target GenerateStenciledLabelMapFromParticlesTest
[ 20%] Built target GenerateDistanceMapFromLabelMapLib
[ 20%] Built target GenerateDistanceMapFromLabelMap
[ 20%] Built target GenerateDistanceMapFromLabelMapTest

[ 20%] Built target FilterVesselParticleDataLib
[ 20%] Built target FilterVesselParticleData
[ 20%] Built target FilterVesselParticleDataTest
[ 20%] Built target FilterAirwayParticleDataLib
[ 20%] Built target FilterAirwayParticleData
[ 20%] Built target FilterAirwayParticleDataTest
[ 20%] Built target ReadNRRDsWriteVTKLib
[ 20%] Built target ReadNRRDsWriteVTK
[ 20%] Built target ReadNRRDsWriteVTKTest
[ 20%] Built target ReadVTKWriteNRRDsLib

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/RegisterLungAtlasTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ResampleLabelMap'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/ResampleLabelMapTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/RescaleLabelMap'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/RescaleLabelMapTest'.  Stop.

[ 20%] Built target ReadVTKWriteNRRDs
[ 20%] Built target ReadVTKWriteNRRDsTest
[ 20%] Built target ComputeCrossSectionalAreaLib
[ 20%] Built target ComputeCrossSectionalArea
[ 20%] Built target ComputeCrossSectionalAreaTest
[ 20%] Built target ComputeIntensityStatisticsLib
[ 20%] Built target ComputeIntensityStatistics
[ 20%] Built target ComputeIntensityStatisticsTest
[ 20%] Built target FilterFissureParticleDataLib
[ 20%] Built target FilterFissureParticleData

[ 20%] Built target GenerateLobeSurfaceModelsTest
[ 20%] Built target ClassifyFissureParticlesLib
[ 20%] Built target ClassifyFissureParticles
[ 20%] Built target ClassifyFissureParticlesTest
[ 20%] Built target CropLungLib
[ 20%] Built target CropLung
[ 20%] Built target CropLungTest
[ 20%] Built target GenerateModelLib
[ 20%] Built target GenerateModel
[ 20%] Built target GenerateModelTest

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ResampleCT'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/ResampleCTTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/QualityControl'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/QualityControlTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/RemoveChestTypeFromLabelMapUsingParticles'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/RemoveChestTypeFromLabelMapUsingParticlesTest'.  Stop.

[ 20%] Built target GenerateImageSubVolumesLib
[ 20%] Built target GenerateImageSubVolumes
[ 20%] Built target GenerateImageSubVolumesTest
[ 20%] Built target GenerateMedianFilteredImageLib
[ 20%] Built target GenerateMedianFilteredImage
[ 20%] Built target GenerateMedianFilteredImageTest
[ 20%] Built target FindPatchMatchLib
[ 20%] Built target FindPatchMatch
[ 20%] Built target FindPatchMatchTest
[ 20%] Built target TransferRegionAndTypeIndicesToFromPointsLib

[ 20%] Built target TransferRegionAndTypeIndicesToFromPoints
[ 20%] Built target TransferRegionAndTypeIndicesToFromPointsTest
[ 20%] Built target EvaluateLungLobeSegmentationResultsLib
[ 20%] Built target EvaluateLungLobeSegmentationResults
[ 20%] Built target EvaluateLungLobeSegmentationResultsTest
[ 20%] Built target ConvertLabelMapValueToChestRegionChestTypeLib
[ 20%] Built target ConvertLabelMapValueToChestRegionChestType
[ 20%] Built target ConvertLabelMapValueToChestRegionChestTypeTest

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/SegmentLungLobes'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/SegmentLungLobesTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ReadDicomWriteTags'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/ReadDicomWriteTagsTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/SplitLeftLungRightLung'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/SplitLeftLungRightLungTest'.  Stop.

[ 20%] Built target GenerateRegionHistogramsAndParenchymaPhenotypesLib
[ 20%] Built target GenerateRegionHistogramsAndParenchymaPhenotypes
[ 20%] Built target GenerateRegionHistogramsAndParenchymaPhenotypesTest
[ 20%] Built target ComputeDistanceMapLib
[ 20%] Built target ComputeDistanceMap
[ 20%] Built target ComputeDistanceMapTest
[ 20%] Built target PerturbParticlesLib
[ 20%] Built target PerturbParticles
[ 20%] Built target PerturbParticlesTest
[ 20%] Built target ReadWriteRegionAndTypePointsLib

[ 20%] Built target ReadWriteRegionAndTypePoints
[ 20%] Built target ReadWriteRegionAndTypePointsTest
[ 20%] Built target PerformMorphologicalLib
[ 20%] Built target PerformMorphological
[ 20%] Built target PerformMorphologicalTest
[ 20%] Built target GenerateOverlayImagesLib
[ 20%] Built target GenerateOverlayImages
[ 20%] Built target GenerateOverlayImagesTest
[ 20%] Building CXX object CommandLineTools/GetTransformationSimilarityMetric/CMakeFiles/GetTransformationSimilarityMetricLib.dir/GetTransformationSimilarityMetric.cxx.o

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ExtractChestLabelMap'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/ExtractChestLabelMapTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/LabelParticlesByChestRegionChestType'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/LabelParticlesByChestRegionChestTypeTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/GenerateStenciledLabelMapFromParticles'.  Stop.

Linking CXX static library ../../bin/libGetTransformationSimilarityMetricLib.a
[ 20%] Built target GetTransformationSimilarityMetricLib
[ 20%] Built target GetTransformationSimilarityMetric
Scanning dependencies of target GetTransformationSimilarityMetricTest
[ 20%] Building CXX object CommandLineTools/GetTransformationSimilarityMetric/CMakeFiles/GetTransformationSimilarityMetricTest.dir/Testing/GetTransformationSimilarityMetricTest.cxx.o

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/GenerateStenciledLabelMapFromParticlesTest'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/GenerateDistanceMapFromLabelMap'.  Stop.

gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/GenerateDistanceMapFromLabelMapTest'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/FilterVesselParticleData'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/FilterVesselParticleDataTest'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/FilterAirwayParticleData'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/FilterAirwayParticleDataTest'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ReadNRRDsWriteVTK'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/ReadNRRDsWriteVTKTest'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ReadVTKWriteNRRDs'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformBase-4.9.so.1', needed by `CommandLineTools/Testing/bin/ReadVTKWriteNRRDsTest'.  Stop.
gmake[5]: *** No rule to make target `/.../CIP-build/ITKv4-build/lib/libITKIOTransformHDF5-4.9.so.1', needed by `bin/ComputeCrossSectionalArea'.  Stop.
The maximum number of reported warnings or errors has been reached!!!

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Test (0 passed, 0 failed, 0 not run)

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