Site Name: bwh002376.bwh.harvard.edu
Build Name: CIP-Darwin-13.4.0-x86_64-incr-SL-ON (view notes)
Stamp: 20160129-0400-Nightly (related builds)
Time: 2016-01-28T23:01:55 EST
Type: Nightly

OS Name: Mac OS X
OS Platform: x86_64
OS Release: 10.9.5
OS Version: 13F1134
Compiler Version: unknown
CTest version: ctest-3.0.2

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Stage: Update (0 errors, 0 warnings)

Start Time: 2016-01-28T23:01:20 EST
End Time: 2016-01-28T23:01:27 EST
Update Command: "/Applications/GitHub.app/Contents/Resources/git/bin/git" "fetch"
Update Type: GIT
Number of Updates: 5

Configure (0 errors, 0 warnings)

Start Time: 2016-01-28T23:01:28 EST
End Time: 2016-01-28T23:01:52 EST
Configure Command: /Users/acil-user/Library/Enthought/Canopy_64bit/User/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release "-GUnix Makefiles" "/Users/acil-user/Projects/CIP"
Configure Return Value: 0
Configure Output: 
----------- ENTRY ------------
----------- PHASE 2 ------------
Configuring CIP...
ChestConv: ON
----------- DONE ------------
-- Configuring SEM CLI module: ConvertDicom
-- Configuring SEM CLI module: MergeParticleDataSets
-- Configuring SEM CLI module: RemoveParticlesFromParticlesDataSet
-- Configuring SEM CLI module: ExtractParticlesFromChestRegionChestType
-- Configuring SEM CLI module: GenerateOtsuLungCast
-- Configuring SEM CLI module: GenerateAtlasConvexHull
-- Configuring SEM CLI module: RegisterLungAtlas
-- Configuring SEM CLI module: ResampleLabelMap
-- Configuring SEM CLI module: RescaleLabelMap
-- Configuring CIP
-- Configuring SEM CLI module: ResampleCT
-- Configuring SEM CLI module: QualityControl
-- Configuring SEM CLI module: RemoveChestTypeFromLabelMapUsingParticles
-- Configuring SEM CLI module: SegmentLungLobes
-- Configuring SEM CLI module: ReadDicomWriteTags
-- Configuring SEM CLI module: SplitLeftLungRightLung
-- Configuring SEM CLI module: ExtractChestLabelMap
-- Configuring SEM CLI module: LabelParticlesByChestRegionChestType
-- Configuring SEM CLI module: GenerateStenciledLabelMapFromParticles
-- Configuring SEM CLI module: GenerateDistanceMapFromLabelMap
-- Configuring SEM CLI module: FilterVesselParticleData
-- Configuring SEM CLI module: FilterAirwayParticleData
-- Configuring SEM CLI module: ScourParticleData
-- Configuring SEM CLI module: ReadNRRDsWriteVTK
-- Configuring SEM CLI module: ReadVTKWriteNRRDs
-- Configuring SEM CLI module: ComputeCrossSectionalArea
-- Configuring SEM CLI module: ComputeIntensityStatistics
-- Configuring SEM CLI module: FilterFissureParticleData
-- Configuring SEM CLI module: GenerateLobeSurfaceModels
-- Configuring SEM CLI module: ClassifyFissureParticles
-- Configuring SEM CLI module: CropLung
-- Configuring SEM CLI module: GenerateModel
-- Configuring SEM CLI module: GenerateImageSubVolumes
-- Configuring SEM CLI module: GenerateMedianFilteredImage
-- Configuring SEM CLI module: FindPatchMatch
-- Configuring SEM CLI module: TransferRegionAndTypeIndicesToFromPoints
-- Configuring SEM CLI module: EvaluateLungLobeSegmentationResults
-- Configuring SEM CLI module: ConvertLabelMapValueToChestRegionChestType
-- Configuring SEM CLI module: GenerateRegionHistogramsAndParenchymaPhenotypes
-- Configuring SEM CLI module: ComputeDistanceMap
-- Configuring SEM CLI module: TransferFieldDataToFromPointData
-- Configuring SEM CLI module: PerturbParticles
-- Configuring SEM CLI module: ReadWriteRegionAndTypePoints
-- Configuring SEM CLI module: PerformMorphological
-- Configuring SEM CLI module: GenerateOverlayImages
-- Configuring SEM CLI module: GetTransformationSimilarityMetric
-- Configuring SEM CLI module: GetTransformationKappa2D
-- Configuring SEM CLI module: GetTransformationKappa
-- Configuring SEM CLI module: ReadWriteImageData
-- Configuring SEM CLI module: GetStructuresInLabelMap
-- Configuring SEM CLI module: GeneratePartialLungLabelMap
-- Configuring SEM CLI module: ReadVidaWriteCIP
-- Configuring SEM CLI module: RegisterLabelMaps
-- Configuring SEM CLI module: RegisterCT
-- Configuring SEM CLI module: MergeChestLabelMaps
-- Configuring SEM CLI module: MaskOutLabelMapStructures
-- Configuring SEM CLI module: ComputeFeatureStrength
-- Configuring SEM CLI module: LabelMapFromRegionAndTypePoints
-- Configuring SEM CLI module: GenerateSimpleLungMask
-- Configuring SEM CLI module: GenerateBinaryThinning3D
-- Configuring SEM CLI module: ConvertChestRegionChestTypeToLabelMapValue
-- Configuring SEM CLI module: FilterConnectedComponents
-- Configuring SEM CLI module: EnhanceFissuresInImage
-- Configuring SEM CLI module: ComputeFissureFeatureVectors
-- Configuring SEM CLI module: FitLobeSurfaceModelsToParticleData
-- Configuring SEM CLI module: GenerateLesionSegmentation
-- Configuring SEM CLI module: RemapLabelMap
-- Configuring SEM CLI module: GenerateNLMFilteredImage
-- Configuring SEM CLI module: ComputeAirwayWallFromParticles
-- Configuring SEM CLI module: RegionTypeLocationsToROIVolume
-- Configuring SEM CLI module: ExtractFissureBoundaryFromLobeMap
-- Configuring SEM CLI module: ExecuteSystemCommand
Wrapping ChestConventions with Python in /Users/acil-user/Projects/CIP-build/CIPPython-install/bin/python
Installing cip_python tools in /Users/acil-user/Projects/CIP-build/CIP-build
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/acil-user/Projects/CIP-build/CIP-build

View Configure Summary

Build (0 errors, 2 warnings)

Build command: -- -i
Start Time: 2016-01-28T23:01:55 EST
End Time: 2016-01-28T23:04:31 EST

View Errors Summary


Build Warnings (2)
[100%] Built target ITKVtkGlue
[100%] Built target ITKVtkGlue-all
[ 35%] No install step for 'ITKv4'
[ 36%] Completed 'ITKv4'
[ 40%] Built target ITKv4
[ 41%] Performing update step for 'SlicerExecutionModel'
[ 43%] Performing configure step for 'SlicerExecutionModel'
loading initial cache file /.../CIP-build/SlicerExecutionModel-prefix/tmp/SlicerExecutionModel-cache.cmake
-- Configuring done
-- Generating done

CMake Warning (dev):

  Policy CMP0042 is not set: MACOSX_RPATH is enabled by default.  Run "cmake
  --help-policy CMP0042" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

  MACOSX_RPATH is not specified for the following targets:

   ModuleDescriptionParser

This warning is for project developers.  Use -Wno-dev to suppress it.

# packages in environment at /.../CIP-build/CIPPython-install:
#
nose                      1.3.7                    py27_0  
[ 74%] Completed 'CIPPython'
[ 78%] Built target CIPPython
[ 79%] Performing update step for 'teem'
[ 81%] Performing configure step for 'teem'
loading initial cache file /.../CIP-build/teem-prefix/tmp/teem-cache.cmake
-- Configuring done
-- Generating done

CMake Warning (dev):

  Policy CMP0042 is not set: MACOSX_RPATH is enabled by default.  Run "cmake
  --help-policy CMP0042" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

  MACOSX_RPATH is not specified for the following targets:

   teem

This warning is for project developers.  Use -Wno-dev to suppress it.


View Warnings Summary


Test (71  passed, 5 failed, 0 not run)
 
View Tests Summary